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The map label for this gene is 110677989

Identifier: 110677989

GI number: 110677989

Start: 591862

End: 592851

Strand: Direct

Name: 110677989

Synonym: RD1_0610

Alternate gene names: NA

Gene position: 591862-592851 (Clockwise)

Preceding gene: 110677988

Following gene: 110677990

Centisome position: 14.32

GC content: 56.87

Gene sequence:

>990_bases
ATGCCCAATGACGCTGAGACGCGCGAGGCGGGGCGGTGGAATTATCGCCCGCCCGTACCGCTGGCGCAGAATCCGCTGTT
TCAATGGCCCCCCAAACCCGCAGCCATCTTTCGCTGGTACGCCGCGTTCTGGCTTGAAGTGTCGACCACGACGCTCTGTC
TGGTTTTTGCACTGATCGCCTATTTCCTCGTCCTGCCGGATCTGGCCGAGATGCAGGTGCTGGCATGGGGTTGGGTCTCA
CAGGTCTGGCTTGCCAATCTGATCCCGCAGGTCATTTGCGCGGGCACGCTGCATTATTGGCTGATCATGCGCAAAGGACA
GGGTGATAAAACCAAATACGACCCGCGCGATCAGGCGCGCGACAACGGGACGTTCACCTTCGGCAATCAGGTCCATGACA
ATATGTTCTGGCATATTGCCAGCGGCATCACCCTCTGGACCGCGGCGCAGGTGCTGGTGTTCTGGGGGATGGCGAATGGC
TATGCGCCCGCCATGCTGTTTCCGGGCAACCCGCTGTGGTTTGTTGCGTTTTTCGTGCTGATCCCGATCTGGTCGAGCTT
TCATTTTTACTGGATACACCGCGCGCTACACTGGCCGCCGCTCTATAAACTGGCCCATTCCCTGCACCACCGTAACGTCA
ATGTCGGGCCGTGGTCCGGGATTTCGATGCACCCGGTCGAACATCTGCTGTTTTACACAAACTTCCTGATCCATTTCGTC
GTGCCCAGCCATCCGTTGCACGTTCTTTTTCATGGTTATGTTCAATCGACGCATCCTGTCTTTTCCCATTCCGGGTTTGA
GGAAATCGTGGTGAACGACAAACGTCGGGCCAAGGCCGGGGTGTTCTTTCACCAGCTGCATCACCGGTATTTTGAATGTA
ACTATGGCACGGTTGAGATGCCCTGGGACCGTTGGTTTGGCAGTTATCATGACGGATCCGCGCAAGCGACGGATGACACG
CGGGCGCGCAAAAAGCAGATGTATACCTGA

Upstream 100 bases:

>100_bases
GTCGCAGAAAAGACCGCGCGCGAGATCGAAGATTACCCCGAACAGGATCTGCGGCATCTGGCCGAACTCAAGGCCATTCT
GGATGAAGAAGGCGCCACCT

Downstream 100 bases:

>100_bases
TGGCACCGGTATTTTACGAGGACTTGAAACGCTGGACCAGCACACGCCGGTTGGGAAGAAGGGCAAGCTGTCGCCCGTTC
CTTTCCCAATCAAAAGACAC

Product: putative sterol desaturase

Products: NA

Alternate protein names: C-5 Sterol Desaturase; Fatty Acid Hydroxylase; Desaturase; Desaturase Protein; Sterol Desaturase Family Protein

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MPNDAETREAGRWNYRPPVPLAQNPLFQWPPKPAAIFRWYAAFWLEVSTTTLCLVFALIAYFLVLPDLAEMQVLAWGWVS
QVWLANLIPQVICAGTLHYWLIMRKGQGDKTKYDPRDQARDNGTFTFGNQVHDNMFWHIASGITLWTAAQVLVFWGMANG
YAPAMLFPGNPLWFVAFFVLIPIWSSFHFYWIHRALHWPPLYKLAHSLHHRNVNVGPWSGISMHPVEHLLFYTNFLIHFV
VPSHPLHVLFHGYVQSTHPVFSHSGFEEIVVNDKRRAKAGVFFHQLHHRYFECNYGTVEMPWDRWFGSYHDGSAQATDDT
RARKKQMYT

Sequences:

>Translated_329_residues
MPNDAETREAGRWNYRPPVPLAQNPLFQWPPKPAAIFRWYAAFWLEVSTTTLCLVFALIAYFLVLPDLAEMQVLAWGWVS
QVWLANLIPQVICAGTLHYWLIMRKGQGDKTKYDPRDQARDNGTFTFGNQVHDNMFWHIASGITLWTAAQVLVFWGMANG
YAPAMLFPGNPLWFVAFFVLIPIWSSFHFYWIHRALHWPPLYKLAHSLHHRNVNVGPWSGISMHPVEHLLFYTNFLIHFV
VPSHPLHVLFHGYVQSTHPVFSHSGFEEIVVNDKRRAKAGVFFHQLHHRYFECNYGTVEMPWDRWFGSYHDGSAQATDDT
RARKKQMYT
>Mature_328_residues
PNDAETREAGRWNYRPPVPLAQNPLFQWPPKPAAIFRWYAAFWLEVSTTTLCLVFALIAYFLVLPDLAEMQVLAWGWVSQ
VWLANLIPQVICAGTLHYWLIMRKGQGDKTKYDPRDQARDNGTFTFGNQVHDNMFWHIASGITLWTAAQVLVFWGMANGY
APAMLFPGNPLWFVAFFVLIPIWSSFHFYWIHRALHWPPLYKLAHSLHHRNVNVGPWSGISMHPVEHLLFYTNFLIHFVV
PSHPLHVLFHGYVQSTHPVFSHSGFEEIVVNDKRRAKAGVFFHQLHHRYFECNYGTVEMPWDRWFGSYHDGSAQATDDTR
ARKKQMYT

Specific function: Unknown

COG id: COG3000

COG function: function code I; Sterol desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38382; Mature: 38251

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNDAETREAGRWNYRPPVPLAQNPLFQWPPKPAAIFRWYAAFWLEVSTTTLCLVFALIA
CCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFLVLPDLAEMQVLAWGWVSQVWLANLIPQVICAGTLHYWLIMRKGQGDKTKYDPRDQAR
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCHHCC
DNGTFTFGNQVHDNMFWHIASGITLWTAAQVLVFWGMANGYAPAMLFPGNPLWFVAFFVL
CCCCEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHH
IPIWSSFHFYWIHRALHWPPLYKLAHSLHHRNVNVGPWSGISMHPVEHLLFYTNFLIHFV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VPSHPLHVLFHGYVQSTHPVFSHSGFEEIVVNDKRRAKAGVFFHQLHHRYFECNYGTVEM
CCCCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHEECCCCEEEC
PWDRWFGSYHDGSAQATDDTRARKKQMYT
CHHHHCCCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
PNDAETREAGRWNYRPPVPLAQNPLFQWPPKPAAIFRWYAAFWLEVSTTTLCLVFALIA
CCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFLVLPDLAEMQVLAWGWVSQVWLANLIPQVICAGTLHYWLIMRKGQGDKTKYDPRDQAR
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCHHCC
DNGTFTFGNQVHDNMFWHIASGITLWTAAQVLVFWGMANGYAPAMLFPGNPLWFVAFFVL
CCCCEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHH
IPIWSSFHFYWIHRALHWPPLYKLAHSLHHRNVNVGPWSGISMHPVEHLLFYTNFLIHFV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VPSHPLHVLFHGYVQSTHPVFSHSGFEEIVVNDKRRAKAGVFFHQLHHRYFECNYGTVEM
CCCCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHEECCCCEEEC
PWDRWFGSYHDGSAQATDDTRARKKQMYT
CHHHHCCCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA