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The map label for this gene is arnC [H]

Identifier: 110677958

GI number: 110677958

Start: 559039

End: 559965

Strand: Direct

Name: arnC [H]

Synonym: RD1_0575

Alternate gene names: 110677958

Gene position: 559039-559965 (Clockwise)

Preceding gene: 110677957

Following gene: 110677959

Centisome position: 13.53

GC content: 54.48

Gene sequence:

>927_bases
ATGCAAAATCCAGTCTACAGCACCGTCATTCCGGTCTACAACAGCACCCGAACGCTCGGCGAACTGGTGTCGCGGCTGGA
TCAGGTTTTCACAGAGATCGGCGCGGCGCATGAAGTCGTGTTTGTTGACGATGGCTCACCCAACCCGGAGACTTGGCCGA
TCCTAAAGGCGCTGGCAGAAGAGCATGAACATGTTCATGCAACCCGCTTGATGCGTAACTTCGGAAAAGCAGGCGCCGTG
CTCTGTGGCCTGCGTCAAGCGAAAGGCGAATGGGTCATCACGATTGATGATGATTTGCAGCATGCCCCTGAAGACATCCC
CATTCTGCTTGAAAAGAAAAGCCATGATGTTGTCATCGGGGCCTTTGCGTCGCGTAAGAAACACTCGGTTTTCCAGCGTG
TTACCAGCCGAATAAAGAGTTATGTCGACACGAGGGTACTGGGCGTGCCGCCGGGTGTTCGCATGTCACCTTTCAAGCTT
TTTCATGCAAGGGTCGTGCAGCACATGATAGCGGTCGATACGACCCGCCCGTTCATTCCTGCGCTTATGTTGCAGTCCAC
GCAGGATATTGTGCAGGTCGAGATCACGCATCATCCCCGCCTATACGGGCGGTCTGCCTTCGGACTGCGGCGACGCATAC
GGCAGTTTTCAAATCTGATCTTTGGCAATGCATCGCTGGTTTTGCGCTTTCTTGCGGTGCTTGGCGTGACAATCTCTTGT
TTGAGCTTGTTGTACGGGGGGTGGCTCGTGCTGTCCTACTTCTGGAAAGAGCAGACTGTGGCCGGGTGGACGTCCTTGAT
GGTGGTTACGTTGACGCTTGGCGGGCTTATCATGTTTTCGCTGGGGGTCATCGGCGAATATCTCATTCGCATTATCGAAC
GCGTAGAAAACCGCGCCGCCTATCTGGAGCGCGAAAAACTTCGCTAG

Upstream 100 bases:

>100_bases
TAACCAAGCTGTTCCGGTATCCGTTGTTTCAGAATGTGATGCCCTATATGCAGCTTGAGCTCCGTCCTGATACGACGCGC
CAAACAACAAGCGGAACATG

Downstream 100 bases:

>100_bases
AGAGTGGCGGGATATCAGGTATTCCGGAATGCCTGCGCGGCAGTGAACCAACCGCACGGGGCACTGGAAAAATGCGCGCG
GGTGCCGGGTTAACTGTGCC

Product: glycosyl transferase, putative

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MQNPVYSTVIPVYNSTRTLGELVSRLDQVFTEIGAAHEVVFVDDGSPNPETWPILKALAEEHEHVHATRLMRNFGKAGAV
LCGLRQAKGEWVITIDDDLQHAPEDIPILLEKKSHDVVIGAFASRKKHSVFQRVTSRIKSYVDTRVLGVPPGVRMSPFKL
FHARVVQHMIAVDTTRPFIPALMLQSTQDIVQVEITHHPRLYGRSAFGLRRRIRQFSNLIFGNASLVLRFLAVLGVTISC
LSLLYGGWLVLSYFWKEQTVAGWTSLMVVTLTLGGLIMFSLGVIGEYLIRIIERVENRAAYLEREKLR

Sequences:

>Translated_308_residues
MQNPVYSTVIPVYNSTRTLGELVSRLDQVFTEIGAAHEVVFVDDGSPNPETWPILKALAEEHEHVHATRLMRNFGKAGAV
LCGLRQAKGEWVITIDDDLQHAPEDIPILLEKKSHDVVIGAFASRKKHSVFQRVTSRIKSYVDTRVLGVPPGVRMSPFKL
FHARVVQHMIAVDTTRPFIPALMLQSTQDIVQVEITHHPRLYGRSAFGLRRRIRQFSNLIFGNASLVLRFLAVLGVTISC
LSLLYGGWLVLSYFWKEQTVAGWTSLMVVTLTLGGLIMFSLGVIGEYLIRIIERVENRAAYLEREKLR
>Mature_308_residues
MQNPVYSTVIPVYNSTRTLGELVSRLDQVFTEIGAAHEVVFVDDGSPNPETWPILKALAEEHEHVHATRLMRNFGKAGAV
LCGLRQAKGEWVITIDDDLQHAPEDIPILLEKKSHDVVIGAFASRKKHSVFQRVTSRIKSYVDTRVLGVPPGVRMSPFKL
FHARVVQHMIAVDTTRPFIPALMLQSTQDIVQVEITHHPRLYGRSAFGLRRRIRQFSNLIFGNASLVLRFLAVLGVTISC
LSLLYGGWLVLSYFWKEQTVAGWTSLMVVTLTLGGLIMFSLGVIGEYLIRIIERVENRAAYLEREKLR

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=223, Percent_Identity=25.5605381165919, Blast_Score=75, Evalue=9e-14,
Organism=Escherichia coli, GI1788588, Length=306, Percent_Identity=28.1045751633987, Blast_Score=130, Evalue=9e-32,
Organism=Escherichia coli, GI1788692, Length=299, Percent_Identity=27.4247491638796, Blast_Score=107, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24585265, Length=232, Percent_Identity=25.4310344827586, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 34741; Mature: 34741

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNPVYSTVIPVYNSTRTLGELVSRLDQVFTEIGAAHEVVFVDDGSPNPETWPILKALAE
CCCCCCHHEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHH
EHEHVHATRLMRNFGKAGAVLCGLRQAKGEWVITIDDDLQHAPEDIPILLEKKSHDVVIG
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCHHHCCCCCCEEEECCCCCEEEE
AFASRKKHSVFQRVTSRIKSYVDTRVLGVPPGVRMSPFKLFHARVVQHMIAVDTTRPFIP
EHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH
ALMLQSTQDIVQVEITHHPRLYGRSAFGLRRRIRQFSNLIFGNASLVLRFLAVLGVTISC
HHHHHCCHHHEEEEECCCCCHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LSLLYGGWLVLSYFWKEQTVAGWTSLMVVTLTLGGLIMFSLGVIGEYLIRIIERVENRAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLEREKLR
HHHHHHCC
>Mature Secondary Structure
MQNPVYSTVIPVYNSTRTLGELVSRLDQVFTEIGAAHEVVFVDDGSPNPETWPILKALAE
CCCCCCHHEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHH
EHEHVHATRLMRNFGKAGAVLCGLRQAKGEWVITIDDDLQHAPEDIPILLEKKSHDVVIG
HHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCHHHCCCCCCEEEECCCCCEEEE
AFASRKKHSVFQRVTSRIKSYVDTRVLGVPPGVRMSPFKLFHARVVQHMIAVDTTRPFIP
EHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHH
ALMLQSTQDIVQVEITHHPRLYGRSAFGLRRRIRQFSNLIFGNASLVLRFLAVLGVTISC
HHHHHCCHHHEEEEECCCCCHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LSLLYGGWLVLSYFWKEQTVAGWTSLMVVTLTLGGLIMFSLGVIGEYLIRIIERVENRAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLEREKLR
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA