Click here to switch to the map view.

The map label for this gene is 110677957

Identifier: 110677957

GI number: 110677957

Start: 558164

End: 559039

Strand: Direct

Name: 110677957

Synonym: RD1_0573

Alternate gene names: NA

Gene position: 558164-559039 (Clockwise)

Preceding gene: 110677956

Following gene: 110677958

Centisome position: 13.5

GC content: 53.31

Gene sequence:

>876_bases
GTGAAACATACTGCTATGGCTGCCGAACCTGCCACGTCTTCCGCCTTACTGGAGGAACTGCGCCGCGCGGATTTCCCCAA
GAAGGACATCAGTATCGCAGAAGCGCAGTTCGGCTTCCGCTATGTGGCCGAGTATCTTGGTGAATTGCCTGAAAACGGTA
AGGTGCTGGAAGTCGGGTGCGGCAGCGGCATTCTGATGGGGCTGCTGAAAGAACAATACCCGACGCTGAATGTCGAGGGG
GTGGAGCCCTTGGGCGATGGCTTCGCCGTGCTTGGTAGCATCAATCGATACATCCGCAATCAAGGGATAGAGATTCAGAA
AATCGGCTATGAGCAGATCGAAACTCAGAATCGCTACGATGTCATTTATTGCATCAATGTGTTCGAGCACCTGAACGACT
GGCGCGACTTTCTACATTTTGTGGAAAACCACCTTACGCCGACGGGCGTGTGTTTGATTTTATGTCCCAACTACGGCTTT
CCCTACGAGTCACATTTCAAGATACCGGTGATCGTTAACAAGCCGATCACGGCATCGGTCTTTCGCAAGACCATTGACCG
GCATGAAGAGCGCAAGGAAAGCCACGGCCTTTGGCGCAGTCTGAATTTCGTCAAGCTCCGGCAGGTTCGTCAGGCGCTTG
CACGCACGTCACTTCGCCTCACCGTGCGACATCGCATCATCGAGGATATGATTGCGCGCACTGGAAATGACGCAGAGTTC
CGCAAGCGGCAGAAAGTGATAGGCACGTTGGGCAGAGTTGCCTACAAGGCTGGCATAACCAAGCTGTTCCGGTATCCGTT
GTTTCAGAATGTGATGCCCTATATGCAGCTTGAGCTCCGTCCTGATACGACGCGCCAAACAACAAGCGGAACATGA

Upstream 100 bases:

>100_bases
CATTTACCCTTCGGTGCAACGGCGATTACATGCCGTTCTGCACTGAAAGCGTTCAAACCCATGAAACTGTGGTATCCATG
AAGCTCTGAAGGAACAGAAA

Downstream 100 bases:

>100_bases
TGCAAAATCCAGTCTACAGCACCGTCATTCCGGTCTACAACAGCACCCGAACGCTCGGCGAACTGGTGTCGCGGCTGGAT
CAGGTTTTCACAGAGATCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MKHTAMAAEPATSSALLEELRRADFPKKDISIAEAQFGFRYVAEYLGELPENGKVLEVGCGSGILMGLLKEQYPTLNVEG
VEPLGDGFAVLGSINRYIRNQGIEIQKIGYEQIETQNRYDVIYCINVFEHLNDWRDFLHFVENHLTPTGVCLILCPNYGF
PYESHFKIPVIVNKPITASVFRKTIDRHEERKESHGLWRSLNFVKLRQVRQALARTSLRLTVRHRIIEDMIARTGNDAEF
RKRQKVIGTLGRVAYKAGITKLFRYPLFQNVMPYMQLELRPDTTRQTTSGT

Sequences:

>Translated_291_residues
MKHTAMAAEPATSSALLEELRRADFPKKDISIAEAQFGFRYVAEYLGELPENGKVLEVGCGSGILMGLLKEQYPTLNVEG
VEPLGDGFAVLGSINRYIRNQGIEIQKIGYEQIETQNRYDVIYCINVFEHLNDWRDFLHFVENHLTPTGVCLILCPNYGF
PYESHFKIPVIVNKPITASVFRKTIDRHEERKESHGLWRSLNFVKLRQVRQALARTSLRLTVRHRIIEDMIARTGNDAEF
RKRQKVIGTLGRVAYKAGITKLFRYPLFQNVMPYMQLELRPDTTRQTTSGT
>Mature_291_residues
MKHTAMAAEPATSSALLEELRRADFPKKDISIAEAQFGFRYVAEYLGELPENGKVLEVGCGSGILMGLLKEQYPTLNVEG
VEPLGDGFAVLGSINRYIRNQGIEIQKIGYEQIETQNRYDVIYCINVFEHLNDWRDFLHFVENHLTPTGVCLILCPNYGF
PYESHFKIPVIVNKPITASVFRKTIDRHEERKESHGLWRSLNFVKLRQVRQALARTSLRLTVRHRIIEDMIARTGNDAEF
RKRQKVIGTLGRVAYKAGITKLFRYPLFQNVMPYMQLELRPDTTRQTTSGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 33394; Mature: 33394

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHTAMAAEPATSSALLEELRRADFPKKDISIAEAQFGFRYVAEYLGELPENGKVLEVGC
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
GSGILMGLLKEQYPTLNVEGVEPLGDGFAVLGSINRYIRNQGIEIQKIGYEQIETQNRYD
CCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHCCCCCE
VIYCINVFEHLNDWRDFLHFVENHLTPTGVCLILCPNYGFPYESHFKIPVIVNKPITASV
EEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHH
FRKTIDRHEERKESHGLWRSLNFVKLRQVRQALARTSLRLTVRHRIIEDMIARTGNDAEF
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
RKRQKVIGTLGRVAYKAGITKLFRYPLFQNVMPYMQLELRPDTTRQTTSGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEEECCCCCCCCCCCC
>Mature Secondary Structure
MKHTAMAAEPATSSALLEELRRADFPKKDISIAEAQFGFRYVAEYLGELPENGKVLEVGC
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
GSGILMGLLKEQYPTLNVEGVEPLGDGFAVLGSINRYIRNQGIEIQKIGYEQIETQNRYD
CCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHCCCCCE
VIYCINVFEHLNDWRDFLHFVENHLTPTGVCLILCPNYGFPYESHFKIPVIVNKPITASV
EEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCHHHH
FRKTIDRHEERKESHGLWRSLNFVKLRQVRQALARTSLRLTVRHRIIEDMIARTGNDAEF
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
RKRQKVIGTLGRVAYKAGITKLFRYPLFQNVMPYMQLELRPDTTRQTTSGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]