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The map label for this gene is ubiG

Identifier: 110677790

GI number: 110677790

Start: 386171

End: 386917

Strand: Direct

Name: ubiG

Synonym: RD1_0392

Alternate gene names: 110677790

Gene position: 386171-386917 (Clockwise)

Preceding gene: 110677783

Following gene: 110677795

Centisome position: 9.34

GC content: 58.9

Gene sequence:

>747_bases
ATGCAAGCGCCACAAACAACTGTTGATCCGTCCGAAATTGCCAAGTTCGAGGCGATGGCGGCTGAATGGTGGGACGAAAA
CGGGAAATTCAAACCGCTGCACATGCTGAACCCGTGTCGGCTGGATTACATCACCACGCAGATTGCAGGTGAATTTGACC
GCGATCTGGCAAGCCCGGAACCGTTCAAAGGATTGCGTATTCTGGACATCGGCTGCGGGGGCGGGTTGCTGGCCGAACCC
ATGGCGCGGCTCGGAGCGGATGTCGTGGGCGCAGATGCGGCAGAGCGGAACATCCCCGTGGCGCGTGTACATGCCGAGCA
ATCGGGCCTGACCATAGATTATCGCCATACCACCGCCGAAGCGCTGGCCGCTGAGGGAGAGCAATTCGACGTGGTCCTCA
ACATGGAGGTGGTGGAGCATGTCGCCTCCCCCATCGACTACCTGATCGCCTGTCGTCAGTTGCTGAAACCCGGTGGATTG
CAGGTCTGTTCGACCCTGAACCGCAACCCGAAATCCTATGTGATGGCCATCATCGGGGCAGAACATGTGATGCGCTGGCT
GCCCAAAGGCACGCATGAGTGGTCCAAATTCATCACCCCGGATGAGCTTTACGATCTGCTGCGTCAATCGGGGATGGACC
CGGTGGACCGCAAGGGATTCGTGTTCAACCCGATCTCATGGTCCTGGAAACTGTCGGGTCGGGATCTGAGCGTGAACTAC
GTCACGGCGAGCGTGAAGCCCGCCTAG

Upstream 100 bases:

>100_bases
CCGGAGGGTACAGGTATTGCACTGCGCGCTTTTGGTCCGAGAATTTATCCATTAGGGGCCTATATAGTACGGAAAGATAC
ATGATCATATGGAGCCGAGA

Downstream 100 bases:

>100_bases
AGCGTCTGACGCGATGCCTGAAATAACAACCGTTATGTCATGCGTTGAAACCCTTGAAGTCAGGCAGCGTTGCGTACTTC
AGGTTTTCAGACGACGCTTT

Product: 3-demethylubiquinone-9 3-methyltransferase

Products: NA

Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MQAPQTTVDPSEIAKFEAMAAEWWDENGKFKPLHMLNPCRLDYITTQIAGEFDRDLASPEPFKGLRILDIGCGGGLLAEP
MARLGADVVGADAAERNIPVARVHAEQSGLTIDYRHTTAEALAAEGEQFDVVLNMEVVEHVASPIDYLIACRQLLKPGGL
QVCSTLNRNPKSYVMAIIGAEHVMRWLPKGTHEWSKFITPDELYDLLRQSGMDPVDRKGFVFNPISWSWKLSGRDLSVNY
VTASVKPA

Sequences:

>Translated_248_residues
MQAPQTTVDPSEIAKFEAMAAEWWDENGKFKPLHMLNPCRLDYITTQIAGEFDRDLASPEPFKGLRILDIGCGGGLLAEP
MARLGADVVGADAAERNIPVARVHAEQSGLTIDYRHTTAEALAAEGEQFDVVLNMEVVEHVASPIDYLIACRQLLKPGGL
QVCSTLNRNPKSYVMAIIGAEHVMRWLPKGTHEWSKFITPDELYDLLRQSGMDPVDRKGFVFNPISWSWKLSGRDLSVNY
VTASVKPA
>Mature_248_residues
MQAPQTTVDPSEIAKFEAMAAEWWDENGKFKPLHMLNPCRLDYITTQIAGEFDRDLASPEPFKGLRILDIGCGGGLLAEP
MARLGADVVGADAAERNIPVARVHAEQSGLTIDYRHTTAEALAAEGEQFDVVLNMEVVEHVASPIDYLIACRQLLKPGGL
QVCSTLNRNPKSYVMAIIGAEHVMRWLPKGTHEWSKFITPDELYDLLRQSGMDPVDRKGFVFNPISWSWKLSGRDLSVNY
VTASVKPA

Specific function: Ubiquinone biosynthesis. [C]

COG id: COG2227

COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family

Homologues:

Organism=Homo sapiens, GI118600965, Length=246, Percent_Identity=39.4308943089431, Blast_Score=186, Evalue=1e-47,
Organism=Escherichia coli, GI1788564, Length=236, Percent_Identity=47.4576271186441, Blast_Score=212, Evalue=2e-56,
Organism=Caenorhabditis elegans, GI115533050, Length=251, Percent_Identity=33.8645418326693, Blast_Score=130, Evalue=9e-31,
Organism=Saccharomyces cerevisiae, GI6324476, Length=238, Percent_Identity=29.4117647058824, Blast_Score=110, Evalue=2e-25,
Organism=Drosophila melanogaster, GI281365311, Length=245, Percent_Identity=33.0612244897959, Blast_Score=128, Evalue=4e-30,
Organism=Drosophila melanogaster, GI24585589, Length=243, Percent_Identity=34.156378600823, Blast_Score=127, Evalue=6e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): UBIG_ROSDO (Q16D32)

Other databases:

- EMBL:   CP000362
- RefSeq:   YP_680797.1
- ProteinModelPortal:   Q16D32
- SMR:   Q16D32
- STRING:   Q16D32
- GeneID:   4195382
- GenomeReviews:   CP000362_GR
- KEGG:   rde:RD1_0392
- NMPDR:   fig|375451.6.peg.369
- eggNOG:   COG2227
- HOGENOM:   HBG738842
- OMA:   KFITPDE
- PhylomeDB:   Q16D32
- ProtClustDB:   PRK05134
- BioCyc:   RDEN375451:RD1_0392-MONOMER
- HAMAP:   MF_00472
- InterPro:   IPR013216
- InterPro:   IPR010233
- TIGRFAMs:   TIGR01983

Pfam domain/function: PF08241 Methyltransf_11

EC number: =2.1.1.64

Molecular weight: Translated: 27452; Mature: 27452

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAPQTTVDPSEIAKFEAMAAEWWDENGKFKPLHMLNPCRLDYITTQIAGEFDRDLASPE
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHCHHHHHCCCCC
PFKGLRILDIGCGGGLLAEPMARLGADVVGADAAERNIPVARVHAEQSGLTIDYRHTTAE
CCCCEEEEEECCCCCHHHHHHHHHCCCHHCCCCHHCCCCEEEEEECCCCCEEEECCCHHH
ALAAEGEQFDVVLNMEVVEHVASPIDYLIACRQLLKPGGLQVCSTLNRNPKSYVMAIIGA
HHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHEEHHHHH
EHVMRWLPKGTHEWSKFITPDELYDLLRQSGMDPVDRKGFVFNPISWSWKLSGRDLSVNY
HHHHHHCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEECCCEEEEEE
VTASVKPA
EEEECCCC
>Mature Secondary Structure
MQAPQTTVDPSEIAKFEAMAAEWWDENGKFKPLHMLNPCRLDYITTQIAGEFDRDLASPE
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHCHHHHHCCCCC
PFKGLRILDIGCGGGLLAEPMARLGADVVGADAAERNIPVARVHAEQSGLTIDYRHTTAE
CCCCEEEEEECCCCCHHHHHHHHHCCCHHCCCCHHCCCCEEEEEECCCCCEEEECCCHHH
ALAAEGEQFDVVLNMEVVEHVASPIDYLIACRQLLKPGGLQVCSTLNRNPKSYVMAIIGA
HHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHEEHHHHH
EHVMRWLPKGTHEWSKFITPDELYDLLRQSGMDPVDRKGFVFNPISWSWKLSGRDLSVNY
HHHHHHCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEECCCEEEEEE
VTASVKPA
EEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA