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The map label for this gene is 110677741

Identifier: 110677741

GI number: 110677741

Start: 331353

End: 333293

Strand: Direct

Name: 110677741

Synonym: RD1_0339

Alternate gene names: NA

Gene position: 331353-333293 (Clockwise)

Preceding gene: 110677740

Following gene: 110677742

Centisome position: 8.02

GC content: 57.39

Gene sequence:

>1941_bases
ATGAACCTTTCTGTTACATCAATTGTCGGCTTGCCGGGAATGCCAACAACTACTTTTGGGACACGAAAGTGGTTGAAATG
CAGAAACGTTGCACATGAGAAGCAAGGCAAGAGATTTGTATTCAACCTCTGCGACCTGCCCGAAGATATCCGCACCGCGT
ACCTGACCCGCCAAATCGAACTGGCTGGGCTTGATACTGGCACCTATGATGAAGCGGCGCATGACCAGTTGCGCGCGGCC
CCTGCGTCGATGCAGACCGCCGCAGAACGGCGCGCAGCCATTACACGGCTGCTGGTAAAGCTGGGTGACAGTGTGAGTTG
GAAAGACCGGCGCGCGCTGGTTTGCAAAGAGTTCGGCACCAAGGGCAATTCGATCCAGAGCCTTAAACGCCTGTTCAAAG
AGGTCGAGAATACTGACCCGATCAACTTCGCGCCTGCGTTACTGCAAGGCCATAAGGGTCGCACGGTCAAGGCTGATATC
GCGGATGAACTTTGGGAGTTGTGGCTTGGTATCATTCAGAAGTCCGCGCCCTCCCATGCGCTGACGGCGGTTTATGACGA
TGTTCAGTTGATTGCAGACAAGAAGGGGCTGGCATGGCCCAGCTACCCGACGATCCTGCGGCGCTGGAACGCCTTGCCAG
AGATCGAGCGCACTACCCTTCGCCACGGTGGCAAGCACGCAGCCAAAGAGCTTTATCAGCCGCAACGGCGCAGTGTTGCC
AAGGTTCAGGCCATGCAAGTCGTTGAAATGGATGGCCGAACGCTGGATATCTGGGCGGAGTTCGAGGACGGCACGATAGC
GCGCCCCACCATGATCGCGCTGGTGGATCGCGCCTCTTTCAAGGGCCTGCACTTCGTAATTGGTAAGGGCGAAACGGCCC
TGCTTACCCGCGACCTTATCCTTGAAACCTGTGATCGCTATGGCATTTTTGATCAGTTGTTGACGGATAACAGCCGCTCA
TTTTCTGGCCTTTTGGTCGCCGGTGGCGTCAAGCACAAGTTCCGCAACTCCGGGTCTCGCTTGCCTGAGTGGGAACCGCC
CGGTGTCTGTGAACACTTGGGCATCGAATTGAAGTTCACCTTGCCGCACAATCCGGGTGCTAAGATACCGGAAAGCAAAT
TCGCAAAATGGTCACGTCGCATTGACACCCGGCCTGAATTTGCCGGTGCGCATTCAGGGCACAACCCGCTCGACAAACCT
AACGGCAACGAAACACCGGTTCCAATCGCTTTGGTGCGTGAAATTTATGCACGCGAGATGGCCCGCGACAATGCCAAGGC
GGGCCGTCGCACGCAGAATGCGCGCAAGGGTGAGAGCTATGACCAGACCTTTAATCGGCTGTTGCAGAGCCGCATTCACA
GGCCCATGCAACCCAAGCAGCGCTGGCGCGCATCCTTGCTCTATCAGGTGCGCACCGTGGATCGTCTGGGGCAGATTAGG
GTCAACGGCTGGGTTTATGGCAAGGACAGCCTGGACGGCTCACAAGAGCGGCTTTTGCCCTATGCAGGCCTGCCGGTTTT
GATCGGCACGGATCCGTCGAACTATGCAGCGCCCGCGATTGCCTTCGATATGGACACAAGGCGCGAGATCATGGCCGGTA
TCCAGCCCGATCTGGAAGGTGACTACATGGATCAGGACGGTGCCCGTGAGGCCAGCAAGGAACGCGCGCGATTGCGCAAG
ATCACCCGCGAGATTGAAACCCGGCACAGCCGCGACTTGTCCGATTTCTACGCCGATCTGAACGACGGCCGGGACCTTGG
GTGCTTGGATGATCCGGCCCGCGCCAATGTCGTCAAACCCAACTTTAAAGACCCGATCCGCGCGAAAGCCAATGCCAAAT
CTGAGGCAACGGAACGCGCGGAACGTCAGGAATTCTTGGTCCGCATGAAGGCGGAACAGAATGAACGAAAGGCCAGCGGT
GGCACCCGCCAGCCTTTCTGA

Upstream 100 bases:

>100_bases
TAAAACGGCAAAACGCCGATAAGGCGCTACTTGGGCAATGGCAGGGTGAGAAGGCCAGCAATCTGGTACAGCGCATTTTG
GCCGCTGCGACGTCCATAGA

Downstream 100 bases:

>100_bases
ATGTCACCAAACCTTAGCAAAGGATCACGATAACATGAGAGAAACCATACAACCCATCGACACCACGGTCTACACGACTT
TGGATTGGCAGGTCAGGAAC

Product: transposase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 646; Mature: 646

Protein sequence:

>646_residues
MNLSVTSIVGLPGMPTTTFGTRKWLKCRNVAHEKQGKRFVFNLCDLPEDIRTAYLTRQIELAGLDTGTYDEAAHDQLRAA
PASMQTAAERRAAITRLLVKLGDSVSWKDRRALVCKEFGTKGNSIQSLKRLFKEVENTDPINFAPALLQGHKGRTVKADI
ADELWELWLGIIQKSAPSHALTAVYDDVQLIADKKGLAWPSYPTILRRWNALPEIERTTLRHGGKHAAKELYQPQRRSVA
KVQAMQVVEMDGRTLDIWAEFEDGTIARPTMIALVDRASFKGLHFVIGKGETALLTRDLILETCDRYGIFDQLLTDNSRS
FSGLLVAGGVKHKFRNSGSRLPEWEPPGVCEHLGIELKFTLPHNPGAKIPESKFAKWSRRIDTRPEFAGAHSGHNPLDKP
NGNETPVPIALVREIYAREMARDNAKAGRRTQNARKGESYDQTFNRLLQSRIHRPMQPKQRWRASLLYQVRTVDRLGQIR
VNGWVYGKDSLDGSQERLLPYAGLPVLIGTDPSNYAAPAIAFDMDTRREIMAGIQPDLEGDYMDQDGAREASKERARLRK
ITREIETRHSRDLSDFYADLNDGRDLGCLDDPARANVVKPNFKDPIRAKANAKSEATERAERQEFLVRMKAEQNERKASG
GTRQPF

Sequences:

>Translated_646_residues
MNLSVTSIVGLPGMPTTTFGTRKWLKCRNVAHEKQGKRFVFNLCDLPEDIRTAYLTRQIELAGLDTGTYDEAAHDQLRAA
PASMQTAAERRAAITRLLVKLGDSVSWKDRRALVCKEFGTKGNSIQSLKRLFKEVENTDPINFAPALLQGHKGRTVKADI
ADELWELWLGIIQKSAPSHALTAVYDDVQLIADKKGLAWPSYPTILRRWNALPEIERTTLRHGGKHAAKELYQPQRRSVA
KVQAMQVVEMDGRTLDIWAEFEDGTIARPTMIALVDRASFKGLHFVIGKGETALLTRDLILETCDRYGIFDQLLTDNSRS
FSGLLVAGGVKHKFRNSGSRLPEWEPPGVCEHLGIELKFTLPHNPGAKIPESKFAKWSRRIDTRPEFAGAHSGHNPLDKP
NGNETPVPIALVREIYAREMARDNAKAGRRTQNARKGESYDQTFNRLLQSRIHRPMQPKQRWRASLLYQVRTVDRLGQIR
VNGWVYGKDSLDGSQERLLPYAGLPVLIGTDPSNYAAPAIAFDMDTRREIMAGIQPDLEGDYMDQDGAREASKERARLRK
ITREIETRHSRDLSDFYADLNDGRDLGCLDDPARANVVKPNFKDPIRAKANAKSEATERAERQEFLVRMKAEQNERKASG
GTRQPF
>Mature_646_residues
MNLSVTSIVGLPGMPTTTFGTRKWLKCRNVAHEKQGKRFVFNLCDLPEDIRTAYLTRQIELAGLDTGTYDEAAHDQLRAA
PASMQTAAERRAAITRLLVKLGDSVSWKDRRALVCKEFGTKGNSIQSLKRLFKEVENTDPINFAPALLQGHKGRTVKADI
ADELWELWLGIIQKSAPSHALTAVYDDVQLIADKKGLAWPSYPTILRRWNALPEIERTTLRHGGKHAAKELYQPQRRSVA
KVQAMQVVEMDGRTLDIWAEFEDGTIARPTMIALVDRASFKGLHFVIGKGETALLTRDLILETCDRYGIFDQLLTDNSRS
FSGLLVAGGVKHKFRNSGSRLPEWEPPGVCEHLGIELKFTLPHNPGAKIPESKFAKWSRRIDTRPEFAGAHSGHNPLDKP
NGNETPVPIALVREIYAREMARDNAKAGRRTQNARKGESYDQTFNRLLQSRIHRPMQPKQRWRASLLYQVRTVDRLGQIR
VNGWVYGKDSLDGSQERLLPYAGLPVLIGTDPSNYAAPAIAFDMDTRREIMAGIQPDLEGDYMDQDGAREASKERARLRK
ITREIETRHSRDLSDFYADLNDGRDLGCLDDPARANVVKPNFKDPIRAKANAKSEATERAERQEFLVRMKAEQNERKASG
GTRQPF

Specific function: This transposase is essential for integration, replication-transposition, and excision of Mu-like viral DNA [H]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To phage Mu protein A [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015126
- InterPro:   IPR003314
- InterPro:   IPR012337
- InterPro:   IPR015378
- InterPro:   IPR004189
- InterPro:   IPR009004
- InterPro:   IPR011991 [H]

Pfam domain/function: PF09299 Mu-transpos_C; PF02316 Mu_DNA_bind; PF09039 Mu_I-gamma; PF02914 Mu_transposase [H]

EC number: NA

Molecular weight: Translated: 72779; Mature: 72779

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSVTSIVGLPGMPTTTFGTRKWLKCRNVAHEKQGKRFVFNLCDLPEDIRTAYLTRQIE
CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHEEE
LAGLDTGTYDEAAHDQLRAAPASMQTAAERRAAITRLLVKLGDSVSWKDRRALVCKEFGT
EEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
KGNSIQSLKRLFKEVENTDPINFAPALLQGHKGRTVKADIADELWELWLGIIQKSAPSHA
CCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCHH
LTAVYDDVQLIADKKGLAWPSYPTILRRWNALPEIERTTLRHGGKHAAKELYQPQRRSVA
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCHHHHHHH
KVQAMQVVEMDGRTLDIWAEFEDGTIARPTMIALVDRASFKGLHFVIGKGETALLTRDLI
HHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHEEHHCCCCCEEEEEECCCHHHHHHHHH
LETCDRYGIFDQLLTDNSRSFSGLLVAGGVKHKFRNSGSRLPEWEPPGVCEHLGIELKFT
HHHHHHCCHHHHHHCCCCCCCCCEEEECCHHHHHHCCCCCCCCCCCCCHHHHCCEEEEEE
LPHNPGAKIPESKFAKWSRRIDTRPEFAGAHSGHNPLDKPNGNETPVPIALVREIYAREM
CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
ARDNAKAGRRTQNARKGESYDQTFNRLLQSRIHRPMQPKQRWRASLLYQVRTVDRLGQIR
HHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEE
VNGWVYGKDSLDGSQERLLPYAGLPVLIGTDPSNYAAPAIAFDMDTRREIMAGIQPDLEG
EEEEEEECCCCCCCHHHCCCCCCCCEEEECCCCCCCCCEEEECCHHHHHHHHCCCCCCCC
DYMDQDGAREASKERARLRKITREIETRHSRDLSDFYADLNDGRDLGCLDDPARANVVKP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
NFKDPIRAKANAKSEATERAERQEFLVRMKAEQNERKASGGTRQPF
CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNLSVTSIVGLPGMPTTTFGTRKWLKCRNVAHEKQGKRFVFNLCDLPEDIRTAYLTRQIE
CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHEEE
LAGLDTGTYDEAAHDQLRAAPASMQTAAERRAAITRLLVKLGDSVSWKDRRALVCKEFGT
EEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
KGNSIQSLKRLFKEVENTDPINFAPALLQGHKGRTVKADIADELWELWLGIIQKSAPSHA
CCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCHH
LTAVYDDVQLIADKKGLAWPSYPTILRRWNALPEIERTTLRHGGKHAAKELYQPQRRSVA
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCHHHHHHH
KVQAMQVVEMDGRTLDIWAEFEDGTIARPTMIALVDRASFKGLHFVIGKGETALLTRDLI
HHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHEEHHCCCCCEEEEEECCCHHHHHHHHH
LETCDRYGIFDQLLTDNSRSFSGLLVAGGVKHKFRNSGSRLPEWEPPGVCEHLGIELKFT
HHHHHHCCHHHHHHCCCCCCCCCEEEECCHHHHHHCCCCCCCCCCCCCHHHHCCEEEEEE
LPHNPGAKIPESKFAKWSRRIDTRPEFAGAHSGHNPLDKPNGNETPVPIALVREIYAREM
CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
ARDNAKAGRRTQNARKGESYDQTFNRLLQSRIHRPMQPKQRWRASLLYQVRTVDRLGQIR
HHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEE
VNGWVYGKDSLDGSQERLLPYAGLPVLIGTDPSNYAAPAIAFDMDTRREIMAGIQPDLEG
EEEEEEECCCCCCCHHHCCCCCCCCEEEECCCCCCCCCEEEECCHHHHHHHHCCCCCCCC
DYMDQDGAREASKERARLRKITREIETRHSRDLSDFYADLNDGRDLGCLDDPARANVVKP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
NFKDPIRAKANAKSEATERAERQEFLVRMKAEQNERKASGGTRQPF
CCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]