| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
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The map label for this gene is fghA [H]
Identifier: 110677723
GI number: 110677723
Start: 308437
End: 309267
Strand: Direct
Name: fghA [H]
Synonym: RD1_0320
Alternate gene names: 110677723
Gene position: 308437-309267 (Clockwise)
Preceding gene: 110677722
Following gene: 110677724
Centisome position: 7.46
GC content: 58.72
Gene sequence:
>831_bases ATGGAAACGATTTCTGAAAACGCCTGTTTCGGCGGCACACAGGGTGTCTATTCTCACACATCGGCCAGCTGCAATTGTGA CATGACGTTCGGTCTGTTTCTGCCGGAGGAAGCACAGGACGGCCCTGTGCCGCTGTTGTGGTTTCTGTCGGGCCTGACCT GCACGCATGAAAACGCGATGATCAAGGCCGGTGCGCAGTCCTGGGCGGCAGAGCACGGAATCGCGCTGGTCTTTCCCGAC ACCTCACCACGCGGTGAGGGTGTGGCCGATGATGACGCCTATGATCTGGGACAGGGTGCGGGGTTTTACGTGAACGCCAC GCAAGCCCCTTGGTCGTCGCATTTCAAGATGTGGGATTATGTGACCGAGGAACTGCCAAATTTGCTGGAGCAGAATTTTG CGCTCGACATGAAGCGGCAGGCGATCACGGGCCATTCCATGGGCGGGCATGGCGCTTTGACCATCGCGATGTCCTTGCCG GGGCGATTCCGCTCCGTCTCTGCCTTTGCGCCGATCTCTCACCCGACCGCCAGTGACTGGGGCCGCAAACAGCTGAGCGC CTACCTTGGCGATGATCAAAGCACATGGGCCCCACATGATTCGACGCTTTTGATGCGCGAAAAAGGCTTTGACGGGCCTA TGCTGGTGGATACCGGCACCAAGGACCAGTTCATTGACCTGCTCCAGCCCGAAGCGCTGGCCGAAGCGGTCAATACACGC CGTCAACAGGCGGTGCTGCGGCTGCAACCGGGCTATGACCACAGCTATTTCTTTATCGCCACCTTCATGGAGGAACACAT CGCCTTTCACGCCGACGCGCTTTACGCATGA
Upstream 100 bases:
>100_bases CTTTGTCATTGGCCTTGTGGCACCGCTCTGAGTGCTGAAGGGCTTGCCGACAGACCGATCACGCGATAGCCAATGAGCGA ACACAAAAGGGAGACCCGCA
Downstream 100 bases:
>100_bases CGGCGCTTTACATCGACGCGGATGCCTGCCCGGTCAAATCCGAAGCCGAGCGCGTTGCCACAAGGCACCGGGTCAAGATG TATATCGTGTCCAACGGCGG
Product: S-formylglutathione hydrolase, putative
Products: NA
Alternate protein names: FGH [H]
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues METISENACFGGTQGVYSHTSASCNCDMTFGLFLPEEAQDGPVPLLWFLSGLTCTHENAMIKAGAQSWAAEHGIALVFPD TSPRGEGVADDDAYDLGQGAGFYVNATQAPWSSHFKMWDYVTEELPNLLEQNFALDMKRQAITGHSMGGHGALTIAMSLP GRFRSVSAFAPISHPTASDWGRKQLSAYLGDDQSTWAPHDSTLLMREKGFDGPMLVDTGTKDQFIDLLQPEALAEAVNTR RQQAVLRLQPGYDHSYFFIATFMEEHIAFHADALYA
Sequences:
>Translated_276_residues METISENACFGGTQGVYSHTSASCNCDMTFGLFLPEEAQDGPVPLLWFLSGLTCTHENAMIKAGAQSWAAEHGIALVFPD TSPRGEGVADDDAYDLGQGAGFYVNATQAPWSSHFKMWDYVTEELPNLLEQNFALDMKRQAITGHSMGGHGALTIAMSLP GRFRSVSAFAPISHPTASDWGRKQLSAYLGDDQSTWAPHDSTLLMREKGFDGPMLVDTGTKDQFIDLLQPEALAEAVNTR RQQAVLRLQPGYDHSYFFIATFMEEHIAFHADALYA >Mature_276_residues METISENACFGGTQGVYSHTSASCNCDMTFGLFLPEEAQDGPVPLLWFLSGLTCTHENAMIKAGAQSWAAEHGIALVFPD TSPRGEGVADDDAYDLGQGAGFYVNATQAPWSSHFKMWDYVTEELPNLLEQNFALDMKRQAITGHSMGGHGALTIAMSLP GRFRSVSAFAPISHPTASDWGRKQLSAYLGDDQSTWAPHDSTLLMREKGFDGPMLVDTGTKDQFIDLLQPEALAEAVNTR RQQAVLRLQPGYDHSYFFIATFMEEHIAFHADALYA
Specific function: Serine hydrolase involved in the detoxification of formaldehyde. Hydrolyzes S-formylglutathione to glutathione and formate (Probable) [H]
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the esterase D family [H]
Homologues:
Organism=Homo sapiens, GI33413400, Length=280, Percent_Identity=48.5714285714286, Blast_Score=287, Evalue=6e-78, Organism=Escherichia coli, GI1788477, Length=277, Percent_Identity=54.1516245487365, Blast_Score=295, Evalue=3e-81, Organism=Escherichia coli, GI1786551, Length=275, Percent_Identity=45.4545454545455, Blast_Score=266, Evalue=8e-73, Organism=Caenorhabditis elegans, GI17510185, Length=277, Percent_Identity=45.8483754512635, Blast_Score=257, Evalue=4e-69, Organism=Saccharomyces cerevisiae, GI6322393, Length=298, Percent_Identity=42.6174496644295, Blast_Score=218, Evalue=8e-58, Organism=Drosophila melanogaster, GI45551932, Length=282, Percent_Identity=49.645390070922, Blast_Score=275, Evalue=4e-74, Organism=Drosophila melanogaster, GI24648347, Length=282, Percent_Identity=49.645390070922, Blast_Score=273, Evalue=6e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR014186 [H]
Pfam domain/function: PF00756 Esterase [H]
EC number: =3.1.2.12 [H]
Molecular weight: Translated: 30236; Mature: 30236
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METISENACFGGTQGVYSHTSASCNCDMTFGLFLPEEAQDGPVPLLWFLSGLTCTHENAM CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEHHHHHCCCEEECCCCE IKAGAQSWAAEHGIALVFPDTSPRGEGVADDDAYDLGQGAGFYVNATQAPWSSHFKMWDY EECCHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHCCCCCCEEEECCCCCCHHHHHHHHH VTEELPNLLEQNFALDMKRQAITGHSMGGHGALTIAMSLPGRFRSVSAFAPISHPTASDW HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCCHH GRKQLSAYLGDDQSTWAPHDSTLLMREKGFDGPMLVDTGTKDQFIDLLQPEALAEAVNTR HHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEECCCHHHHHHHCCHHHHHHHHHHH RQQAVLRLQPGYDHSYFFIATFMEEHIAFHADALYA HHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure METISENACFGGTQGVYSHTSASCNCDMTFGLFLPEEAQDGPVPLLWFLSGLTCTHENAM CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEHHHHHCCCEEECCCCE IKAGAQSWAAEHGIALVFPDTSPRGEGVADDDAYDLGQGAGFYVNATQAPWSSHFKMWDY EECCHHHHHHHCCEEEEECCCCCCCCCCCCCCCHHCCCCCCEEEECCCCCCHHHHHHHHH VTEELPNLLEQNFALDMKRQAITGHSMGGHGALTIAMSLPGRFRSVSAFAPISHPTASDW HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCCHH GRKQLSAYLGDDQSTWAPHDSTLLMREKGFDGPMLVDTGTKDQFIDLLQPEALAEAVNTR HHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEECCCHHHHHHHCCHHHHHHHHHHH RQQAVLRLQPGYDHSYFFIATFMEEHIAFHADALYA HHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8892832 [H]