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The map label for this gene is flgF [H]

Identifier: 110677662

GI number: 110677662

Start: 255118

End: 255831

Strand: Direct

Name: flgF [H]

Synonym: RD1_0257

Alternate gene names: 110677662

Gene position: 255118-255831 (Clockwise)

Preceding gene: 110677661

Following gene: 110677663

Centisome position: 6.17

GC content: 54.48

Gene sequence:

>714_bases
ATGGAAAACTCAGGATACACCACGATCACAAGACAGTCTGGTCTTATGAAAGAGATGCGCGTCGTTGCAAACAATATCGC
AAATGCTGCGACTTCCGGCTTTCGTCAAGAAGGGGTCATTTTTTCGGAATATGTAAAATCCGTGGATGGCGCTTCGAGCT
TGTCTATGGGTCAGGCAGATGCAAGGCAGACATCTTTTGCCCAGGGCGCACTCACCCAAACAGGTGGGCAGTTTGACTTT
GCCATTGAAGGTGACGGATTTTTTCTGGTGGAAACGCCTTTGGGCGAACGTCTCACGCGAGCCGGTGCCTTTTCACCGAA
CGCAGATGGCGATTTGGTCACGCCCGACGGTTATCGCGTTCTGGACGCAGGGGGAGCGCCGGTGTTCATTCCCCCCGGTG
CCGCAGATATTGCGGTTTCCGCAGATGGCACGATCTCGACAAATGGTGACCCTGTTGGCCAGCTGGGCTTGGTTCAACCG
CGCAACCCACAGGGGCTTGTTCGCGAGGACGGTGTGATGTTCCGTGCCGATGAAGGCTATGAAGCAGCCGAGCAAGGTCG
AATTCTGCAGAGTTTCGTCGAGAACTCGAACGTCAACCCGATCTTGCAGCTGACCCGTATGATTGAGGTTCAACGCGCAT
ATGAGCTCGGTGCCAGTTTTGTGGAAGCAGAAGATGAGCGTGTCCGACAAGCCATGCGGACCATGTCACAGTAG

Upstream 100 bases:

>100_bases
CCATCGTCCTCGTTTTCTGGATGTCGATGGGCTTCATGACACAAACACTGGTGTCATTTTTTCATGAACAGATAATCCCG
CTGATTGTAGGAGGTTAACG

Downstream 100 bases:

>100_bases
TAGTTTAACGATCAAATCAGGATAGAAACATGCGAGCCTTAAAAATTGCAGCAACGGGCATGAGCGCCCAGCAGATGCGC
GTCGAGACGATCTCGAACAA

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MENSGYTTITRQSGLMKEMRVVANNIANAATSGFRQEGVIFSEYVKSVDGASSLSMGQADARQTSFAQGALTQTGGQFDF
AIEGDGFFLVETPLGERLTRAGAFSPNADGDLVTPDGYRVLDAGGAPVFIPPGAADIAVSADGTISTNGDPVGQLGLVQP
RNPQGLVREDGVMFRADEGYEAAEQGRILQSFVENSNVNPILQLTRMIEVQRAYELGASFVEAEDERVRQAMRTMSQ

Sequences:

>Translated_237_residues
MENSGYTTITRQSGLMKEMRVVANNIANAATSGFRQEGVIFSEYVKSVDGASSLSMGQADARQTSFAQGALTQTGGQFDF
AIEGDGFFLVETPLGERLTRAGAFSPNADGDLVTPDGYRVLDAGGAPVFIPPGAADIAVSADGTISTNGDPVGQLGLVQP
RNPQGLVREDGVMFRADEGYEAAEQGRILQSFVENSNVNPILQLTRMIEVQRAYELGASFVEAEDERVRQAMRTMSQ
>Mature_237_residues
MENSGYTTITRQSGLMKEMRVVANNIANAATSGFRQEGVIFSEYVKSVDGASSLSMGQADARQTSFAQGALTQTGGQFDF
AIEGDGFFLVETPLGERLTRAGAFSPNADGDLVTPDGYRVLDAGGAPVFIPPGAADIAVSADGTISTNGDPVGQLGLVQP
RNPQGLVREDGVMFRADEGYEAAEQGRILQSFVENSNVNPILQLTRMIEVQRAYELGASFVEAEDERVRQAMRTMSQ

Specific function: Unknown

COG id: COG4786

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787318, Length=244, Percent_Identity=32.7868852459016, Blast_Score=97, Evalue=7e-22,
Organism=Escherichia coli, GI1787317, Length=254, Percent_Identity=28.740157480315, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 25283; Mature: 25283

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENSGYTTITRQSGLMKEMRVVANNIANAATSGFRQEGVIFSEYVKSVDGASSLSMGQAD
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHCCCCCCCCCCCCH
ARQTSFAQGALTQTGGQFDFAIEGDGFFLVETPLGERLTRAGAFSPNADGDLVTPDGYRV
HHHHHHHHCCHHCCCCEEEEEEECCCEEEEECCHHHHHHHHCCCCCCCCCCEECCCCCEE
LDAGGAPVFIPPGAADIAVSADGTISTNGDPVGQLGLVQPRNPQGLVREDGVMFRADEGY
EECCCCEEEECCCCCEEEEECCCEEECCCCCCCCCCCCCCCCCCCCEECCCEEEEECCCC
EAAEQGRILQSFVENSNVNPILQLTRMIEVQRAYELGASFVEAEDERVRQAMRTMSQ
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure
MENSGYTTITRQSGLMKEMRVVANNIANAATSGFRQEGVIFSEYVKSVDGASSLSMGQAD
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHCCCCCCCCCCCCH
ARQTSFAQGALTQTGGQFDFAIEGDGFFLVETPLGERLTRAGAFSPNADGDLVTPDGYRV
HHHHHHHHCCHHCCCCEEEEEEECCCEEEEECCHHHHHHHHCCCCCCCCCCEECCCCCEE
LDAGGAPVFIPPGAADIAVSADGTISTNGDPVGQLGLVQPRNPQGLVREDGVMFRADEGY
EECCCCEEEECCCCCEEEEECCCEEECCCCCCCCCCCCCCCCCCCCEECCCEEEEECCCC
EAAEQGRILQSFVENSNVNPILQLTRMIEVQRAYELGASFVEAEDERVRQAMRTMSQ
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1474584; 11259647 [H]