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The map label for this gene is 110677633

Identifier: 110677633

GI number: 110677633

Start: 224950

End: 225585

Strand: Direct

Name: 110677633

Synonym: RD1_0225

Alternate gene names: NA

Gene position: 224950-225585 (Clockwise)

Preceding gene: 110677632

Following gene: 110677634

Centisome position: 5.44

GC content: 55.66

Gene sequence:

>636_bases
ATGGATCATTTTGCAAACCTTCACTGGATTGAAGCGGTTGGCTGGCTGGCGTCCATCCTGACGGTCGCGTCCTATTCGGT
GGCCACGATGCTGCCGCTTCGACTGCTGGCGATCGCGTCATCTGTCTGTTTCGCGGCCTATGCCTTTACCCTGCAGCTTT
GGCCGCTGCTGGCGATGGAGCTGATATTGCTGCCCATCAACATCTACCGACTTTGGCAGGTTCTTGCGTTGCGTGGAAAA
CTGAGCCGCGCAACTGTGTCCACAGAATCGGATTTTTCCATCATCAAGGCCTATGGAAAGCGGAAGACGATCAAGGCCGG
TGAGGTGGTTTTCCAGCGCGGTGATCCGGTGGATCAACTGTACTTCATCGCCAAAGGCCGGGTTTCCATCGAAGAGATGC
AGGTCGATTTATGTGCTGGCGATATTTTTGGCGAAATCGCCTTCTTCACCAATACCGCCACGCGCATCGCGACGGCACGC
TGCACCGAGGACACGCAGGTCTACAGCATTGATGAAAAGCATTTCATGCGTCTGCAATTCGAAGACCCCAGCTTTGGAAT
CGCAGTGATGCGGATCATCACGCACCGCCTGATCGAGAATGTCGGCAAGACCGTGGAACCCGCACCGGGGGCGTGA

Upstream 100 bases:

>100_bases
GCTGCCGTTTCCCTGTTTGTTGGGGGTCGAATTTACCGTACGTAGACGTATGATGCCGTCGTCGCGTTGGCATCTCCCAT
GCGTATAACAGGGGAAGCTG

Downstream 100 bases:

>100_bases
CGGGTGCCGCGAGCAATCCACAGCACCGGCATAATTGCAATCAGAAGGCGCCAAACCGGGCGATCACTGATCTTTGCTGG
TGTCGTTTTCTTTTTTCGGC

Product: cyclic nucleotide-binding domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MDHFANLHWIEAVGWLASILTVASYSVATMLPLRLLAIASSVCFAAYAFTLQLWPLLAMELILLPINIYRLWQVLALRGK
LSRATVSTESDFSIIKAYGKRKTIKAGEVVFQRGDPVDQLYFIAKGRVSIEEMQVDLCAGDIFGEIAFFTNTATRIATAR
CTEDTQVYSIDEKHFMRLQFEDPSFGIAVMRIITHRLIENVGKTVEPAPGA

Sequences:

>Translated_211_residues
MDHFANLHWIEAVGWLASILTVASYSVATMLPLRLLAIASSVCFAAYAFTLQLWPLLAMELILLPINIYRLWQVLALRGK
LSRATVSTESDFSIIKAYGKRKTIKAGEVVFQRGDPVDQLYFIAKGRVSIEEMQVDLCAGDIFGEIAFFTNTATRIATAR
CTEDTQVYSIDEKHFMRLQFEDPSFGIAVMRIITHRLIENVGKTVEPAPGA
>Mature_211_residues
MDHFANLHWIEAVGWLASILTVASYSVATMLPLRLLAIASSVCFAAYAFTLQLWPLLAMELILLPINIYRLWQVLALRGK
LSRATVSTESDFSIIKAYGKRKTIKAGEVVFQRGDPVDQLYFIAKGRVSIEEMQVDLCAGDIFGEIAFFTNTATRIATAR
CTEDTQVYSIDEKHFMRLQFEDPSFGIAVMRIITHRLIENVGKTVEPAPGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23592; Mature: 23592

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHFANLHWIEAVGWLASILTVASYSVATMLPLRLLAIASSVCFAAYAFTLQLWPLLAME
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LILLPINIYRLWQVLALRGKLSRATVSTESDFSIIKAYGKRKTIKAGEVVFQRGDPVDQL
HHHHHHHHHHHHHHHHHHCCHHHHEECCCCCHHHHHHHCCCCCCCHHHEEEECCCCHHHE
YFIAKGRVSIEEMQVDLCAGDIFGEIAFFTNTATRIATARCTEDTQVYSIDEKHFMRLQF
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEECHHHEEEEEE
EDPSFGIAVMRIITHRLIENVGKTVEPAPGA
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDHFANLHWIEAVGWLASILTVASYSVATMLPLRLLAIASSVCFAAYAFTLQLWPLLAME
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LILLPINIYRLWQVLALRGKLSRATVSTESDFSIIKAYGKRKTIKAGEVVFQRGDPVDQL
HHHHHHHHHHHHHHHHHHCCHHHHEECCCCCHHHHHHHCCCCCCCHHHEEEECCCCHHHE
YFIAKGRVSIEEMQVDLCAGDIFGEIAFFTNTATRIATARCTEDTQVYSIDEKHFMRLQF
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEEECHHHEEEEEE
EDPSFGIAVMRIITHRLIENVGKTVEPAPGA
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA