Click here to switch to the map view.

The map label for this gene is 110677614

Identifier: 110677614

GI number: 110677614

Start: 203608

End: 204015

Strand: Direct

Name: 110677614

Synonym: RD1_0206

Alternate gene names: NA

Gene position: 203608-204015 (Clockwise)

Preceding gene: 110677613

Following gene: 110677615

Centisome position: 4.93

GC content: 60.54

Gene sequence:

>408_bases
ATGGCTCACCCTATCAAACATGCGATGGCTGCGACCTTGCTGGCTCTGGGCGGGGCTGCGCAGGCGGAAATGCTGCCGGG
CTCCGAATGGGAACCAACCAAAATGCAGGCACAGCCGTTTGAAAGCGCGCGTGACGTCTTCATCCGGTTCGAACAGGATG
GACGCTATTTTGGCAACGGCGGGTGCAACTCCATACGGGGCCGGTTCGTCACGAATGGTGATGCGATTCTGCTCGGTCCT
GCTGCAGCGACGATGATGGCCTGCCCGGAAGAGATCATGCAGCAGGAATTCGGGTTTTTGCAGACACTGGACAGTGTCCG
ACAATTCGACCGCTCGGGCACTGAACTGACGTTGTCGGATGCGGCGGCGCGCGTGGTCATGCGGTTGCGCCAGCGCGACT
GGGACTGA

Upstream 100 bases:

>100_bases
GCGACCGAGGATCAGAAAGAGGGCATGTCCGCCTTTGTCGAAAAGCGCGAAGCACAGTTCCGCGACCGCTGATTACAGAA
ATAGCGAAGGACACAGCACG

Downstream 100 bases:

>100_bases
ACAGCGTCTATTTTCGGCTTTGCAAACCCGGTCAAACCGCCTATAGCACGCGGCAGACATGCGCGTGCAGCCCGCTCAGG
CTAGAATCACCAGTGGACAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MAHPIKHAMAATLLALGGAAQAEMLPGSEWEPTKMQAQPFESARDVFIRFEQDGRYFGNGGCNSIRGRFVTNGDAILLGP
AAATMMACPEEIMQQEFGFLQTLDSVRQFDRSGTELTLSDAAARVVMRLRQRDWD

Sequences:

>Translated_135_residues
MAHPIKHAMAATLLALGGAAQAEMLPGSEWEPTKMQAQPFESARDVFIRFEQDGRYFGNGGCNSIRGRFVTNGDAILLGP
AAATMMACPEEIMQQEFGFLQTLDSVRQFDRSGTELTLSDAAARVVMRLRQRDWD
>Mature_134_residues
AHPIKHAMAATLLALGGAAQAEMLPGSEWEPTKMQAQPFESARDVFIRFEQDGRYFGNGGCNSIRGRFVTNGDAILLGPA
AATMMACPEEIMQQEFGFLQTLDSVRQFDRSGTELTLSDAAARVVMRLRQRDWD

Specific function: Unknown

COG id: COG3187

COG function: function code O; Heat shock protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14897; Mature: 14766

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHPIKHAMAATLLALGGAAQAEMLPGSEWEPTKMQAQPFESARDVFIRFEQDGRYFGNG
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEECCCCCEECCC
GCNSIRGRFVTNGDAILLGPAAATMMACPEEIMQQEFGFLQTLDSVRQFDRSGTELTLSD
CCCCCCCEEEECCCEEEECHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHH
AAARVVMRLRQRDWD
HHHHHHHHHHHCCCC
>Mature Secondary Structure 
AHPIKHAMAATLLALGGAAQAEMLPGSEWEPTKMQAQPFESARDVFIRFEQDGRYFGNG
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEECCCCCEECCC
GCNSIRGRFVTNGDAILLGPAAATMMACPEEIMQQEFGFLQTLDSVRQFDRSGTELTLSD
CCCCCCCEEEECCCEEEECHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHH
AAARVVMRLRQRDWD
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA