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The map label for this gene is 110677575

Identifier: 110677575

GI number: 110677575

Start: 162209

End: 163546

Strand: Direct

Name: 110677575

Synonym: RD1_0163

Alternate gene names: NA

Gene position: 162209-163546 (Clockwise)

Preceding gene: 162139376

Following gene: 110677576

Centisome position: 3.92

GC content: 54.48

Gene sequence:

>1338_bases
ATGCTTGATATACTAACGACACAGACAGCCCCCCAGCAGATGGGCAAGACGGCCCAAAACAAAAAGATCGAGAATGCAGA
TTCAAAAGAACAAGCATTCGACGAAGAATATGCCGCAACCGGCGATGATGTTGAAGGGACTGAACAGCAGCAAACCGACG
AATCACAGGCCGCTGATCAACAATCAGCCGATGAAGCGGAAACGAAGAGCAGTGATGACACCTCTCCGGATACCGCACCG
GAGCCGAATGCGCAAAACAGTGATGTCACCGTAGAAGAGCAACCGGCCTTTGCCATTGCGCAAGGCAGCAAGGCGGCGAA
AACGCCAGAGGCGGAAAGCAAGACATCCCCAACTGATTTAAGCAGTGCTAAACGCGCGAATATGCAAGAATCTGCGCCGA
CAATGCCAGCGGATGCGGCGCAACCGGCCCAAAAGCCGGGCGTGACAAAGACAGCGGTTTCAGCAACCTCGGCCGCAGAG
GCTTTTGTGACGGCCAAGGCTGCTGAAAACGCGGCGCTGTCGGCTTCGCCGGGCATGGCAGGAAATGCTGAAAAAAGCGC
GGTAGTGGACCCACAACCGCCACGCACATCGGTGTTGAAACAAGCGAATACAGCAACCGCTTTGGTGAGTGCTCCGATCT
CCGGCGAGCAACCATCGGAGAAACTCAAGTCGTTGAAACTCAGTGACGAATTGGCAGCGCGCGCAGTATCGCTGCGTTCT
GATTCTCAAGCGCAACCAGCGCCTCCGATGGTCTCCAGTCCTGCGCAAACCGCAAAATTGATGCCGCTGACAGCCCTTTC
CAAGATCGACATCGGCAAGGAAAAAATGGCGTTGGATTCAACAAGCGCACTGAGTATCGAAGCGCTGAGTGCAGCTGAAA
CCCGCAGCGCGTCTTCTACTTCGACAACGCCGCTGAACCAGCTTTTAGCGCGTGCAGAAACGCCCACGGCGATTGCGCGG
CAAATGGCAGAAGCCTTACAAAAACTGCCAGACCGGCCCGTTGAAATTTCGCTGAATCCAAAAGAACTGGGTCGTGTTCG
CATGAACATTTCCGCGGCCGAGGCTGGAATCACTGTAACCATTGTCACCGAACGTCCGGAAACACTGGATTTGATGCGTC
GCAACATTGATCAACTCGTCCGTGAGTTTCAGGCGATCGGGTACAACGACATAAATTTTGCATTCTCCGAAGGAGAAACA
CAGCAGGGTTTTGCTGAAACTTCGGACGAGCGAAACGGTGCGGCAGCCACACAGCTAGAGTTGTTGCAAGCGGAGGAGAC
CGCCGAGTCCAACGACACAACCCTGAATGCGCAGACTGGCGTGGACATTCGACTTTAA

Upstream 100 bases:

>100_bases
TGCAATTACTTTCAGCGATATTGCACGAGACCAGTAAAGAAGCGGTAACCAACCTATGTAACAACAGTGGCAGAAACGTG
GAAGAACTCCCGGAGGCGCC

Downstream 100 bases:

>100_bases
GGATAAGACATGGATATTTTGAACGCTCAGGCAACACAGCCGACAAGACAACTCGGGACGGCACAGGCATCAAACAGCGC
TGCTTTGTCTTCTGATTTTG

Product: flagellar hook-length control protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MLDILTTQTAPQQMGKTAQNKKIENADSKEQAFDEEYAATGDDVEGTEQQQTDESQAADQQSADEAETKSSDDTSPDTAP
EPNAQNSDVTVEEQPAFAIAQGSKAAKTPEAESKTSPTDLSSAKRANMQESAPTMPADAAQPAQKPGVTKTAVSATSAAE
AFVTAKAAENAALSASPGMAGNAEKSAVVDPQPPRTSVLKQANTATALVSAPISGEQPSEKLKSLKLSDELAARAVSLRS
DSQAQPAPPMVSSPAQTAKLMPLTALSKIDIGKEKMALDSTSALSIEALSAAETRSASSTSTTPLNQLLARAETPTAIAR
QMAEALQKLPDRPVEISLNPKELGRVRMNISAAEAGITVTIVTERPETLDLMRRNIDQLVREFQAIGYNDINFAFSEGET
QQGFAETSDERNGAAATQLELLQAEETAESNDTTLNAQTGVDIRL

Sequences:

>Translated_445_residues
MLDILTTQTAPQQMGKTAQNKKIENADSKEQAFDEEYAATGDDVEGTEQQQTDESQAADQQSADEAETKSSDDTSPDTAP
EPNAQNSDVTVEEQPAFAIAQGSKAAKTPEAESKTSPTDLSSAKRANMQESAPTMPADAAQPAQKPGVTKTAVSATSAAE
AFVTAKAAENAALSASPGMAGNAEKSAVVDPQPPRTSVLKQANTATALVSAPISGEQPSEKLKSLKLSDELAARAVSLRS
DSQAQPAPPMVSSPAQTAKLMPLTALSKIDIGKEKMALDSTSALSIEALSAAETRSASSTSTTPLNQLLARAETPTAIAR
QMAEALQKLPDRPVEISLNPKELGRVRMNISAAEAGITVTIVTERPETLDLMRRNIDQLVREFQAIGYNDINFAFSEGET
QQGFAETSDERNGAAATQLELLQAEETAESNDTTLNAQTGVDIRL
>Mature_445_residues
MLDILTTQTAPQQMGKTAQNKKIENADSKEQAFDEEYAATGDDVEGTEQQQTDESQAADQQSADEAETKSSDDTSPDTAP
EPNAQNSDVTVEEQPAFAIAQGSKAAKTPEAESKTSPTDLSSAKRANMQESAPTMPADAAQPAQKPGVTKTAVSATSAAE
AFVTAKAAENAALSASPGMAGNAEKSAVVDPQPPRTSVLKQANTATALVSAPISGEQPSEKLKSLKLSDELAARAVSLRS
DSQAQPAPPMVSSPAQTAKLMPLTALSKIDIGKEKMALDSTSALSIEALSAAETRSASSTSTTPLNQLLARAETPTAIAR
QMAEALQKLPDRPVEISLNPKELGRVRMNISAAEAGITVTIVTERPETLDLMRRNIDQLVREFQAIGYNDINFAFSEGET
QQGFAETSDERNGAAATQLELLQAEETAESNDTTLNAQTGVDIRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46760; Mature: 46760

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDILTTQTAPQQMGKTAQNKKIENADSKEQAFDEEYAATGDDVEGTEQQQTDESQAADQ
CCCCCCCCCCHHHHCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
QSADEAETKSSDDTSPDTAPEPNAQNSDVTVEEQPAFAIAQGSKAAKTPEAESKTSPTDL
HHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCHH
SSAKRANMQESAPTMPADAAQPAQKPGVTKTAVSATSAAEAFVTAKAAENAALSASPGMA
HHHHHCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GNAEKSAVVDPQPPRTSVLKQANTATALVSAPISGEQPSEKLKSLKLSDELAARAVSLRS
CCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHCC
DSQAQPAPPMVSSPAQTAKLMPLTALSKIDIGKEKMALDSTSALSIEALSAAETRSASST
CCCCCCCCCCCCCCHHHHHHCCHHHHHHCCCCHHHHHCCCCCCEEEHHHHHHHHCCCCCC
STTPLNQLLARAETPTAIARQMAEALQKLPDRPVEISLNPKELGRVRMNISAAEAGITVT
CCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECHHHHCEEEEEEEECCCCEEEE
IVTERPETLDLMRRNIDQLVREFQAIGYNDINFAFSEGETQQGFAETSDERNGAAATQLE
EEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHCCCCCCCCHHHHHH
LLQAEETAESNDTTLNAQTGVDIRL
HHHHHHHCCCCCCEEECCCCCEEEC
>Mature Secondary Structure
MLDILTTQTAPQQMGKTAQNKKIENADSKEQAFDEEYAATGDDVEGTEQQQTDESQAADQ
CCCCCCCCCCHHHHCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
QSADEAETKSSDDTSPDTAPEPNAQNSDVTVEEQPAFAIAQGSKAAKTPEAESKTSPTDL
HHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCHH
SSAKRANMQESAPTMPADAAQPAQKPGVTKTAVSATSAAEAFVTAKAAENAALSASPGMA
HHHHHCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GNAEKSAVVDPQPPRTSVLKQANTATALVSAPISGEQPSEKLKSLKLSDELAARAVSLRS
CCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHCC
DSQAQPAPPMVSSPAQTAKLMPLTALSKIDIGKEKMALDSTSALSIEALSAAETRSASST
CCCCCCCCCCCCCCHHHHHHCCHHHHHHCCCCHHHHHCCCCCCEEEHHHHHHHHCCCCCC
STTPLNQLLARAETPTAIARQMAEALQKLPDRPVEISLNPKELGRVRMNISAAEAGITVT
CCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECHHHHCEEEEEEEECCCCEEEE
IVTERPETLDLMRRNIDQLVREFQAIGYNDINFAFSEGETQQGFAETSDERNGAAATQLE
EEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHCCCCCCCCHHHHHH
LLQAEETAESNDTTLNAQTGVDIRL
HHHHHHHCCCCCCEEECCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA