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The map label for this gene is 110677561

Identifier: 110677561

GI number: 110677561

Start: 148820

End: 149530

Strand: Direct

Name: 110677561

Synonym: RD1_0148

Alternate gene names: NA

Gene position: 148820-149530 (Clockwise)

Preceding gene: 110677560

Following gene: 110677562

Centisome position: 3.6

GC content: 51.05

Gene sequence:

>711_bases
ATGCACAACTGCAAACGTTTCGTTTACCTTTTCTGGGTTTTTCTTTCGTCGGGATTTGCTTTTGAGGCAGAAGCATCAAC
GCAAAATTCTGCCGCACGACATGTCTGTGACCAAGCTGCTGTTCAAGCAGCACGCAGTTCGGATGTGCCTTTGAGCGTGC
TCAAAGCCATCGCGAGGACTGAAAGCGGGATCACGGTGGATGACCAGTTTGCCCCCTGGCCCTGGACGGTAAATTCAGAA
GGACGCGGGGTCAGGTTCTCCTCGGCTGAAGAAGCCATTGAATACGTTGGCTTGAACCGTCAGCGCGGCGTGAGCAACAT
CGACATCGGTTGTTTTCAGATAAACTACAAATGGCATGGGGCGAACTTTTCATCCGTTCAGGAGATGTTCAACCCGTACA
AAAATGCGCTTTATGCCGCGAATTTTCTGACCTCTCTTTACAATGAGTTTGAGGATTGGACCAAGGCCGCCGGCGCGTAT
CATTCACGAAATACAGAGCATTCCGACCTTTATCTTGCAAAGTACATTCCAATTCTGGAGCAGCTTGACCAGACGGGCAG
GCTGAGCGGTGCGCAAAAACAAAGCGTAACGAAAGCAAACTCATTTCCATTGCTGATTGGTCAACCCGCCGACTCAACGC
GAGGCTCTTTGTTTCCGTTGGCGGCTTCATCCCGAGGCAACCTGCTCGTTTCCTCCGGCAGAAAGAACTGA

Upstream 100 bases:

>100_bases
CGACGACCTCCGGGTATTGAATTAATTTGTTTTGGTTACTCAAAATAAACGCAATTCCCATAACCCTCGGACACCGCAGA
ACGCGGCGCTCGGAGGCTCA

Downstream 100 bases:

>100_bases
AGATGGAAAACCTGACCGTCAAGGCCCTGTTCAACCCCACCATCCTGCTGGCGATCGCTCTGATGACGGTGATTGTCATG
ATGATCCTGCCTGTCCCGTC

Product: transglycosylase SLT domain-containing protein

Products: NA

Alternate protein names: Transglycosylase Slt Family; Lytic Transglycosylase; Transglycosylase; Signal Peptide; Transglycosylase SLT Domain-Containing Protein; Soluble Lytic Murein Transglycosylase; Transglycosylase SLT Family Protein; Slt Family Transglycosylase; Transglycosylase SLT Domain; Transglycosylase SLT Domain-Containing; VirB1 Protein; Type IV Secretory Pathway Lytic Transglycosylase; Lytic Murein Transglycosylase Family Protein

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MHNCKRFVYLFWVFLSSGFAFEAEASTQNSAARHVCDQAAVQAARSSDVPLSVLKAIARTESGITVDDQFAPWPWTVNSE
GRGVRFSSAEEAIEYVGLNRQRGVSNIDIGCFQINYKWHGANFSSVQEMFNPYKNALYAANFLTSLYNEFEDWTKAAGAY
HSRNTEHSDLYLAKYIPILEQLDQTGRLSGAQKQSVTKANSFPLLIGQPADSTRGSLFPLAASSRGNLLVSSGRKN

Sequences:

>Translated_236_residues
MHNCKRFVYLFWVFLSSGFAFEAEASTQNSAARHVCDQAAVQAARSSDVPLSVLKAIARTESGITVDDQFAPWPWTVNSE
GRGVRFSSAEEAIEYVGLNRQRGVSNIDIGCFQINYKWHGANFSSVQEMFNPYKNALYAANFLTSLYNEFEDWTKAAGAY
HSRNTEHSDLYLAKYIPILEQLDQTGRLSGAQKQSVTKANSFPLLIGQPADSTRGSLFPLAASSRGNLLVSSGRKN
>Mature_236_residues
MHNCKRFVYLFWVFLSSGFAFEAEASTQNSAARHVCDQAAVQAARSSDVPLSVLKAIARTESGITVDDQFAPWPWTVNSE
GRGVRFSSAEEAIEYVGLNRQRGVSNIDIGCFQINYKWHGANFSSVQEMFNPYKNALYAANFLTSLYNEFEDWTKAAGAY
HSRNTEHSDLYLAKYIPILEQLDQTGRLSGAQKQSVTKANSFPLLIGQPADSTRGSLFPLAASSRGNLLVSSGRKN

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26137; Mature: 26137

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNCKRFVYLFWVFLSSGFAFEAEASTQNSAARHVCDQAAVQAARSSDVPLSVLKAIART
CCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC
ESGITVDDQFAPWPWTVNSEGRGVRFSSAEEAIEYVGLNRQRGVSNIDIGCFQINYKWHG
CCCCEECCCCCCCCEEECCCCCCEEECCHHHHHHHHCCCHHCCCCCCCEEEEEEEEEECC
ANFSSVQEMFNPYKNALYAANFLTSLYNEFEDWTKAAGAYHSRNTEHSDLYLAKYIPILE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHH
QLDQTGRLSGAQKQSVTKANSFPLLIGQPADSTRGSLFPLAASSRGNLLVSSGRKN
HHHHHCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCCCCEEECCCCCC
>Mature Secondary Structure
MHNCKRFVYLFWVFLSSGFAFEAEASTQNSAARHVCDQAAVQAARSSDVPLSVLKAIART
CCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC
ESGITVDDQFAPWPWTVNSEGRGVRFSSAEEAIEYVGLNRQRGVSNIDIGCFQINYKWHG
CCCCEECCCCCCCCEEECCCCCCEEECCHHHHHHHHCCCHHCCCCCCCEEEEEEEEEECC
ANFSSVQEMFNPYKNALYAANFLTSLYNEFEDWTKAAGAYHSRNTEHSDLYLAKYIPILE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHH
QLDQTGRLSGAQKQSVTKANSFPLLIGQPADSTRGSLFPLAASSRGNLLVSSGRKN
HHHHHCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA