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The map label for this gene is bchD [H]

Identifier: 110677537

GI number: 110677537

Start: 122796

End: 124454

Strand: Direct

Name: bchD [H]

Synonym: RD1_0123

Alternate gene names: 110677537

Gene position: 122796-124454 (Clockwise)

Preceding gene: 110677536

Following gene: 110677538

Centisome position: 2.97

GC content: 66.06

Gene sequence:

>1659_bases
GTGAGCCATGAGTCCGACAGCTGGGATCGCGCGGCCCTTGCGCTCCGGCTTTTGACGGTTGAAAACGCGGACCTCGGTGG
TGCCGTCATTCGGATGCGCGCCAGTCCGGCGCGGGATCACGTTCTTGCCGCGCTGCGCGGGCTGAAACTGCGCAAGATTC
ATCCCACCATCAGCGACGACCAGCTGTTTGGCGGCCTCGACCTTGCCGCAACGCTGGAAAGCTCGCACCTTGTTGAAAAC
ACGTCATTCTTTGACGATAAAACCAATGCCCTGCTGGTGATGGCAGAGCGGTGCGGCACCGGGCTGGCCGCAAAGCTGGC
ACAGATCCTCGACAGGGATGCCGGCCATATGCTGATCGCGCTTGATGAAGGTGCCGAAGCGGATGAGCACGCACCCCCTG
CCCTTGCCGACCGGCTTGCGCTGCACATCGAACCCGAAGGCCGTATGCCGGAGGGGTGGCAACCTGCCCCCGCAGGAACA
TCGGCGCTTGACCCCCGCCACGTGACAGTGAGCGCAGGCGATATCCAAACCCTTGCCGAGATCGCGGCGGTTTTCGGCAT
CGACAGTTTGCGCGCGCCTTTGCTGGCGCTGCGTGTGGCGCGGGCGCATGCGGCGCTGAACGGACGCGACAAGGTGACGG
ACAGCGATCTCAATGTGGCTGCCGAACTGACCTATCCACACCGCGCCACGCGGCTTCCGCAAGAACCCGACGCCGCCGAA
GATCCCCCCGCCCCGCCCGAAGATTCGCCCGAGGATGACGCGGCAGGCGACAGCGATACCCTGTCCCTGCCCGAAGGCGA
CATGCTGGTCGAAGCCGTCAAAGCCTTGTTGCCGCCCGACCTGCTGGCGGGTCTTGCCCCTGCGGGGACATCGCGCGGGG
CAAGTGGCGCGGGGGCCGGGCAAAAACGCAAAGGCAACCGCCGGGGTCGCCCTCTGCCCTCCCGACCCGGGCGGCTTGAC
GGGCGCGCCCGCATTGATCTGGTGGCGACTTTGCGTGCTGCCGCCCCGTGGCAACCGCTGCGCCAACGGGCTGTCCCGAC
ACGAACCGGCCTGCACATCCGCCCTTCGGACATCCGCCTCAAACGGTATCAGGAGCAATCGGACCGGCTGCTGATATTCA
CGGTTGATGCCTCCGGCTCTGCCGCCATGTCGCGCCTGAACGAAGCCAAGGGCGCTGTCGAATTGCTGCTGGCACAAGCC
TATGCCGCCCGCGATCACGTGGCCCTTGTGGCCTTTCGCGGTGAGGGGGCCGAGTTGCTGTTGCCACCCACGCGATCACT
GGTGCAAACAAAGCGCCGTCTGGCCAGCCTGCCCGGCGGCGGCGGCACCCCGCTGGCCGCTGGCCTGCAACAGGCCGCTC
TGCTCGCGCAGCAAAGCCGCTCGAAAGGGCTGACCCCGACGGTCGTCGTTCTGACGGACGGCCGTGCCAACATCGCATTG
GACGGCACGCCGGATCGCACGGCAGCACAAGCCGACTCAGAACAGATGGCTCAAATCATTCAGACCCAGAACATCGCCGC
ATTGGTGATTGACATGTCCAAACGCCCGCAAGAGCCGCTCAGGGCTTTGTCCGCGCGGCTTGGCGCGCCATATCTTGCTC
TGCCCCGCGCCGATGCAGAGCGGCTTACCGGGGCCGTCAACGCAGCACTGGACGCCTAG

Upstream 100 bases:

>100_bases
ATATCGCCCCCTCCGCCCTGTCACACCGCTTGCGGCGCGACCCGCTGGACGAGGCCGGATCAGGTGCGCGCGTCGCCCGC
ATCGTCGCCGAGGTTCTGGG

Downstream 100 bases:

>100_bases
ATGCGCTGGCCGCCGCCCAAAGACTGGCCGCACGCTGATCATTCACGACAGGTTTTCTGCCATCCGCACAGATGGCATGT
TCAGGAATTCGGGGCAGGGC

Product: magnesium chelatase subunit D

Products: NA

Alternate protein names: Mg-chelatase subunit D; Mg-protoporphyrin IX chelatase [H]

Number of amino acids: Translated: 552; Mature: 551

Protein sequence:

>552_residues
MSHESDSWDRAALALRLLTVENADLGGAVIRMRASPARDHVLAALRGLKLRKIHPTISDDQLFGGLDLAATLESSHLVEN
TSFFDDKTNALLVMAERCGTGLAAKLAQILDRDAGHMLIALDEGAEADEHAPPALADRLALHIEPEGRMPEGWQPAPAGT
SALDPRHVTVSAGDIQTLAEIAAVFGIDSLRAPLLALRVARAHAALNGRDKVTDSDLNVAAELTYPHRATRLPQEPDAAE
DPPAPPEDSPEDDAAGDSDTLSLPEGDMLVEAVKALLPPDLLAGLAPAGTSRGASGAGAGQKRKGNRRGRPLPSRPGRLD
GRARIDLVATLRAAAPWQPLRQRAVPTRTGLHIRPSDIRLKRYQEQSDRLLIFTVDASGSAAMSRLNEAKGAVELLLAQA
YAARDHVALVAFRGEGAELLLPPTRSLVQTKRRLASLPGGGGTPLAAGLQQAALLAQQSRSKGLTPTVVVLTDGRANIAL
DGTPDRTAAQADSEQMAQIIQTQNIAALVIDMSKRPQEPLRALSARLGAPYLALPRADAERLTGAVNAALDA

Sequences:

>Translated_552_residues
MSHESDSWDRAALALRLLTVENADLGGAVIRMRASPARDHVLAALRGLKLRKIHPTISDDQLFGGLDLAATLESSHLVEN
TSFFDDKTNALLVMAERCGTGLAAKLAQILDRDAGHMLIALDEGAEADEHAPPALADRLALHIEPEGRMPEGWQPAPAGT
SALDPRHVTVSAGDIQTLAEIAAVFGIDSLRAPLLALRVARAHAALNGRDKVTDSDLNVAAELTYPHRATRLPQEPDAAE
DPPAPPEDSPEDDAAGDSDTLSLPEGDMLVEAVKALLPPDLLAGLAPAGTSRGASGAGAGQKRKGNRRGRPLPSRPGRLD
GRARIDLVATLRAAAPWQPLRQRAVPTRTGLHIRPSDIRLKRYQEQSDRLLIFTVDASGSAAMSRLNEAKGAVELLLAQA
YAARDHVALVAFRGEGAELLLPPTRSLVQTKRRLASLPGGGGTPLAAGLQQAALLAQQSRSKGLTPTVVVLTDGRANIAL
DGTPDRTAAQADSEQMAQIIQTQNIAALVIDMSKRPQEPLRALSARLGAPYLALPRADAERLTGAVNAALDA
>Mature_551_residues
SHESDSWDRAALALRLLTVENADLGGAVIRMRASPARDHVLAALRGLKLRKIHPTISDDQLFGGLDLAATLESSHLVENT
SFFDDKTNALLVMAERCGTGLAAKLAQILDRDAGHMLIALDEGAEADEHAPPALADRLALHIEPEGRMPEGWQPAPAGTS
ALDPRHVTVSAGDIQTLAEIAAVFGIDSLRAPLLALRVARAHAALNGRDKVTDSDLNVAAELTYPHRATRLPQEPDAAED
PPAPPEDSPEDDAAGDSDTLSLPEGDMLVEAVKALLPPDLLAGLAPAGTSRGASGAGAGQKRKGNRRGRPLPSRPGRLDG
RARIDLVATLRAAAPWQPLRQRAVPTRTGLHIRPSDIRLKRYQEQSDRLLIFTVDASGSAAMSRLNEAKGAVELLLAQAY
AARDHVALVAFRGEGAELLLPPTRSLVQTKRRLASLPGGGGTPLAAGLQQAALLAQQSRSKGLTPTVVVLTDGRANIALD
GTPDRTAAQADSEQMAQIIQTQNIAALVIDMSKRPQEPLRALSARLGAPYLALPRADAERLTGAVNAALDA

Specific function: Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX [H]

COG id: COG1240

COG function: function code H; Mg-chelatase subunit ChlD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011776
- InterPro:   IPR002035 [H]

Pfam domain/function: PF00092 VWA [H]

EC number: =6.6.1.1 [H]

Molecular weight: Translated: 58250; Mature: 58119

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHESDSWDRAALALRLLTVENADLGGAVIRMRASPARDHVLAALRGLKLRKIHPTISDD
CCCCCCCHHHHHHEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHCCEEEEECCCCCCC
QLFGGLDLAATLESSHLVENTSFFDDKTNALLVMAERCGTGLAAKLAQILDRDAGHMLIA
CCCCCCCHHHHHCCHHHCCCCCCCCCCCCEEEEEHHHCCCCHHHHHHHHHCCCCCCEEEE
LDEGAEADEHAPPALADRLALHIEPEGRMPEGWQPAPAGTSALDPRHVTVSAGDIQTLAE
ECCCCCCCCCCCCHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHH
IAAVFGIDSLRAPLLALRVARAHAALNGRDKVTDSDLNVAAELTYPHRATRLPQEPDAAE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHCCCCCCCCCCC
DPPAPPEDSPEDDAAGDSDTLSLPEGDMLVEAVKALLPPDLLAGLAPAGTSRGASGAGAG
CCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCC
QKRKGNRRGRPLPSRPGRLDGRARIDLVATLRAAAPWQPLRQRAVPTRTGLHIRPSDIRL
CCCCCCCCCCCCCCCCCCCCCCEEEEHEEHHHHCCCCHHHHHCCCCCCCCCEECCCCHHH
KRYQEQSDRLLIFTVDASGSAAMSRLNEAKGAVELLLAQAYAARDHVALVAFRGEGAELL
HHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEE
LPPTRSLVQTKRRLASLPGGGGTPLAAGLQQAALLAQQSRSKGLTPTVVVLTDGRANIAL
ECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEE
DGTPDRTAAQADSEQMAQIIQTQNIAALVIDMSKRPQEPLRALSARLGAPYLALPRADAE
CCCCCCHHHHCCHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHCCCEEECCCCCHH
RLTGAVNAALDA
HHHHHHHHHCCC
>Mature Secondary Structure 
SHESDSWDRAALALRLLTVENADLGGAVIRMRASPARDHVLAALRGLKLRKIHPTISDD
CCCCCCHHHHHHEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHCCEEEEECCCCCCC
QLFGGLDLAATLESSHLVENTSFFDDKTNALLVMAERCGTGLAAKLAQILDRDAGHMLIA
CCCCCCCHHHHHCCHHHCCCCCCCCCCCCEEEEEHHHCCCCHHHHHHHHHCCCCCCEEEE
LDEGAEADEHAPPALADRLALHIEPEGRMPEGWQPAPAGTSALDPRHVTVSAGDIQTLAE
ECCCCCCCCCCCCHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHH
IAAVFGIDSLRAPLLALRVARAHAALNGRDKVTDSDLNVAAELTYPHRATRLPQEPDAAE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHCCCCCCCCCCC
DPPAPPEDSPEDDAAGDSDTLSLPEGDMLVEAVKALLPPDLLAGLAPAGTSRGASGAGAG
CCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCC
QKRKGNRRGRPLPSRPGRLDGRARIDLVATLRAAAPWQPLRQRAVPTRTGLHIRPSDIRL
CCCCCCCCCCCCCCCCCCCCCCEEEEHEEHHHHCCCCHHHHHCCCCCCCCCEECCCCHHH
KRYQEQSDRLLIFTVDASGSAAMSRLNEAKGAVELLLAQAYAARDHVALVAFRGEGAELL
HHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEE
LPPTRSLVQTKRRLASLPGGGGTPLAAGLQQAALLAQQSRSKGLTPTVVVLTDGRANIAL
ECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEE
DGTPDRTAAQADSEQMAQIIQTQNIAALVIDMSKRPQEPLRALSARLGAPYLALPRADAE
CCCCCCHHHHCCHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHCCCEEECCCCCHH
RLTGAVNAALDA
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10648776; 7892204 [H]