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The map label for this gene is 110677514

Identifier: 110677514

GI number: 110677514

Start: 100056

End: 101048

Strand: Direct

Name: 110677514

Synonym: RD1_0100

Alternate gene names: NA

Gene position: 100056-101048 (Clockwise)

Preceding gene: 110677513

Following gene: 110677519

Centisome position: 2.42

GC content: 65.56

Gene sequence:

>993_bases
ATGCGGCCCGGCCCGCGCAACCTGATCACGGATGTTGCTGGCCTGCGGGTCGGCAATGCGCAGGATCACAAGCTCAAATC
AGGGGCAACAGTGCTGACCGCTGATGCGCCGTTCACCGCGTCCGTGCATGTGATGGGCGGTGCGCCCGGCACCCGCGAAA
CGGACCTGCTGGCCCCGGATAAATCGGTCGCATCGGTCGATGCGCTGGTGCTGTCCGGCGGCTCTGCCTTTGGTCTTGAG
GCCTGCACGGGCGTGGTGGATGGGCTGCGTGCCATGGGTCGCGGGTTTGCCGTTGGGTCCGCTATCGTTCCGATCGTGCC
CGGCGCGATCCTGTTCGACCTGATCAATGGCGGGGTCAAGGACTGGAGCACCAACCCCTACCCCGCTTTGGGCCGCCGCG
CGCTGGACACCGCAAGCGATACGTTCGAGATCGGCACAGCAGGGGCCGGGACAGGCGCGACCACCGCCACCCTGAAAGGG
GGGCTCGGCTCATCTTCCCTCGTGTTGGACAATGGCATTACCGTCGGGGCGCTGGTCGCCGCGAACCCCTTTGGAGCGGT
CACGACACCCGGCAGTCGCCATTTCTTTGCCGCGCCTTATGAAATGGGCAACGAATTCGCAGGGCTGGGGCCGGACCCGA
CAAAGGGGCATGGTTTACCCGTCCGGACGAAAGTGCTGCATGGCACCGGCGCGGGCGCGAACACCACAATCGCGATTGTC
GCCACCGATGCGGCCCTCGACAAGGCGCAGTGTCAGCGCATGGCGATCGCCGCGCATGATGGGATGGCGCGCGCGATTGT
GCCCAGCCATACGCCCATGGATGGTGATCTGGTTTTCGCCCTATCGACCGGCGGGAAAGCCTTGGCCGACCTTGACATGA
TCGGCCATGGTGCAGCGCTGTGCCTCACGCGCGCGATTGCCCGCGCTGTTTACGCCGCAACGCCGCAACCGGGTGATCTG
CTACCAAGCTGGCACGACCTGCCGATCTCCTAA

Upstream 100 bases:

>100_bases
CCCCGTGCCGAGGCTGAGTGTCACGTGCTGCTGATCGAACCCAAGGGGGAGCCGAACACCGGCGATCCGGCCACCGCCGC
CGCCAAGCCACATATTTGAC

Downstream 100 bases:

>100_bases
CGCCGCTTTGCGTTCAGGGTGACGACCTTCAGGTCCCGCCCCAGAACGCGGGTGACCTGTTCAACGATGCCCATCGTATC
AAGACCGGCATCACGGTACA

Product: T4 family peptidase putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MRPGPRNLITDVAGLRVGNAQDHKLKSGATVLTADAPFTASVHVMGGAPGTRETDLLAPDKSVASVDALVLSGGSAFGLE
ACTGVVDGLRAMGRGFAVGSAIVPIVPGAILFDLINGGVKDWSTNPYPALGRRALDTASDTFEIGTAGAGTGATTATLKG
GLGSSSLVLDNGITVGALVAANPFGAVTTPGSRHFFAAPYEMGNEFAGLGPDPTKGHGLPVRTKVLHGTGAGANTTIAIV
ATDAALDKAQCQRMAIAAHDGMARAIVPSHTPMDGDLVFALSTGGKALADLDMIGHGAALCLTRAIARAVYAATPQPGDL
LPSWHDLPIS

Sequences:

>Translated_330_residues
MRPGPRNLITDVAGLRVGNAQDHKLKSGATVLTADAPFTASVHVMGGAPGTRETDLLAPDKSVASVDALVLSGGSAFGLE
ACTGVVDGLRAMGRGFAVGSAIVPIVPGAILFDLINGGVKDWSTNPYPALGRRALDTASDTFEIGTAGAGTGATTATLKG
GLGSSSLVLDNGITVGALVAANPFGAVTTPGSRHFFAAPYEMGNEFAGLGPDPTKGHGLPVRTKVLHGTGAGANTTIAIV
ATDAALDKAQCQRMAIAAHDGMARAIVPSHTPMDGDLVFALSTGGKALADLDMIGHGAALCLTRAIARAVYAATPQPGDL
LPSWHDLPIS
>Mature_330_residues
MRPGPRNLITDVAGLRVGNAQDHKLKSGATVLTADAPFTASVHVMGGAPGTRETDLLAPDKSVASVDALVLSGGSAFGLE
ACTGVVDGLRAMGRGFAVGSAIVPIVPGAILFDLINGGVKDWSTNPYPALGRRALDTASDTFEIGTAGAGTGATTATLKG
GLGSSSLVLDNGITVGALVAANPFGAVTTPGSRHFFAAPYEMGNEFAGLGPDPTKGHGLPVRTKVLHGTGAGANTTIAIV
ATDAALDKAQCQRMAIAAHDGMARAIVPSHTPMDGDLVFALSTGGKALADLDMIGHGAALCLTRAIARAVYAATPQPGDL
LPSWHDLPIS

Specific function: Unknown

COG id: COG3191

COG function: function code EQ; L-aminopeptidase/D-esterase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv1333 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016117
- InterPro:   IPR005321 [H]

Pfam domain/function: PF03576 Peptidase_S58 [H]

EC number: NA

Molecular weight: Translated: 33087; Mature: 33087

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPGPRNLITDVAGLRVGNAQDHKLKSGATVLTADAPFTASVHVMGGAPGTRETDLLAPD
CCCCCHHHHHHHHHEEECCCCCCEECCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCC
KSVASVDALVLSGGSAFGLEACTGVVDGLRAMGRGFAVGSAIVPIVPGAILFDLINGGVK
CCHHHEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHCCCCC
DWSTNPYPALGRRALDTASDTFEIGTAGAGTGATTATLKGGLGSSSLVLDNGITVGALVA
CCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCEEEEECCCCCCCEEEECCCEEEEEEE
ANPFGAVTTPGSRHFFAAPYEMGNEFAGLGPDPTKGHGLPVRTKVLHGTGAGANTTIAIV
CCCCCCEECCCCCCEEECHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEE
ATDAALDKAQCQRMAIAAHDGMARAIVPSHTPMDGDLVFALSTGGKALADLDMIGHGAAL
EECCHHCHHHHHHEEEECCCCCEEEECCCCCCCCCCEEEEEECCCCEEEHHHHHCCHHHH
CLTRAIARAVYAATPQPGDLLPSWHDLPIS
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRPGPRNLITDVAGLRVGNAQDHKLKSGATVLTADAPFTASVHVMGGAPGTRETDLLAPD
CCCCCHHHHHHHHHEEECCCCCCEECCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCC
KSVASVDALVLSGGSAFGLEACTGVVDGLRAMGRGFAVGSAIVPIVPGAILFDLINGGVK
CCHHHEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHCCCCC
DWSTNPYPALGRRALDTASDTFEIGTAGAGTGATTATLKGGLGSSSLVLDNGITVGALVA
CCCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCEEEEECCCCCCCEEEECCCEEEEEEE
ANPFGAVTTPGSRHFFAAPYEMGNEFAGLGPDPTKGHGLPVRTKVLHGTGAGANTTIAIV
CCCCCCEECCCCCCEEECHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEE
ATDAALDKAQCQRMAIAAHDGMARAIVPSHTPMDGDLVFALSTGGKALADLDMIGHGAAL
EECCHHCHHHHHHEEEECCCCCEEEECCCCCCCCCCEEEEEECCCCEEEHHHHHCCHHHH
CLTRAIARAVYAATPQPGDLLPSWHDLPIS
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]