Click here to switch to the map view.

The map label for this gene is pqiA [H]

Identifier: 110677491

GI number: 110677491

Start: 79254

End: 79913

Strand: Direct

Name: pqiA [H]

Synonym: RD1_0076

Alternate gene names: 110677491

Gene position: 79254-79913 (Clockwise)

Preceding gene: 110677490

Following gene: 110677492

Centisome position: 1.92

GC content: 53.33

Gene sequence:

>660_bases
ATGGTCCGTATGGAACGCATTGAGCCGACCCAGAAGATCGTAACCGCGCGCGAGTTAGGGCTGGTGGGCTGCGTTCGCTG
TCATCAGGTCTGGCCTGAGGACACAGCACGATGCGGGCGCTGCGGGCACGCATTGAAAAGCCGCGATACCAAAAGCCTGC
AAAGGGTCTGGGCGTTCTGGCTGATTGGCCTTATGTGCTATATTCCGGCCAATATCTATCCGATGCTGCAAACCCGTATG
CTGTTTTATGTGCAGGACAGCACGATCATCGGCGGCGCGGTGGAACTGATCGAATATGGCAGTATCGGGATTGCGCTTGT
GATCCTTTTTGCCTCCGTGGCCATCCCGATTGGAAAGTTCATTGCCATTGCGTTTCTGGCCATATCGCTGCACCGGCCCA
CAACTGTTTCAAATCACCAGCGCCAAAGGCTTTTGGAGATCGTGGAATACATCGGGCGGTGGTCCATGATCGACATATTC
GTGGTCGCCATCCTGTCATCGCTGGTGCAGCTTCAGTTGATTGTGACCATAAATCCCGGTGCAGCCAGCATATTTTTCGC
CGCTGCTGTTATTTTCACAATGATTTCGGCGCAGTCTTTTGATAGCCGCCTGATATGGGACCAGATCAACGCGCAGGATG
AGAAACCGAAAAATGAATGA

Upstream 100 bases:

>100_bases
TCAAGGTCAGCGCTTTGGTTCATGTGACTTTCGGGCCTGCTTTCTGGCTTTTCAGCGTGCTGGTCATGCTTGTGGTTGTG
CAGGAAAACATAATCTGTAG

Downstream 100 bases:

>100_bases
TGCCCCGCCGGTTCCGATCGAAAAAGAACCGAAATCTCTTATCAGCAACCTGTCCATTGTCTGGATCATCCCGGCACTGG
CGCTGGTGACCGCATTGTTT

Product: paraquat-inducible protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MVRMERIEPTQKIVTARELGLVGCVRCHQVWPEDTARCGRCGHALKSRDTKSLQRVWAFWLIGLMCYIPANIYPMLQTRM
LFYVQDSTIIGGAVELIEYGSIGIALVILFASVAIPIGKFIAIAFLAISLHRPTTVSNHQRQRLLEIVEYIGRWSMIDIF
VVAILSSLVQLQLIVTINPGAASIFFAAAVIFTMISAQSFDSRLIWDQINAQDEKPKNE

Sequences:

>Translated_219_residues
MVRMERIEPTQKIVTARELGLVGCVRCHQVWPEDTARCGRCGHALKSRDTKSLQRVWAFWLIGLMCYIPANIYPMLQTRM
LFYVQDSTIIGGAVELIEYGSIGIALVILFASVAIPIGKFIAIAFLAISLHRPTTVSNHQRQRLLEIVEYIGRWSMIDIF
VVAILSSLVQLQLIVTINPGAASIFFAAAVIFTMISAQSFDSRLIWDQINAQDEKPKNE
>Mature_219_residues
MVRMERIEPTQKIVTARELGLVGCVRCHQVWPEDTARCGRCGHALKSRDTKSLQRVWAFWLIGLMCYIPANIYPMLQTRM
LFYVQDSTIIGGAVELIEYGSIGIALVILFASVAIPIGKFIAIAFLAISLHRPTTVSNHQRQRLLEIVEYIGRWSMIDIF
VVAILSSLVQLQLIVTINPGAASIFFAAAVIFTMISAQSFDSRLIWDQINAQDEKPKNE

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1787183, Length=215, Percent_Identity=38.1395348837209, Blast_Score=142, Evalue=1e-35,
Organism=Escherichia coli, GI1788137, Length=212, Percent_Identity=33.9622641509434, Blast_Score=124, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 24610; Mature: 24610

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRMERIEPTQKIVTARELGLVGCVRCHQVWPEDTARCGRCGHALKSRDTKSLQRVWAFW
CCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LIGLMCYIPANIYPMLQTRMLFYVQDSTIIGGAVELIEYGSIGIALVILFASVAIPIGKF
HHHHHHHHCCCHHHHHHHHHHEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
IAIAFLAISLHRPTTVSNHQRQRLLEIVEYIGRWSMIDIFVVAILSSLVQLQLIVTINPG
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEEEECCC
AASIFFAAAVIFTMISAQSFDSRLIWDQINAQDEKPKNE
HHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MVRMERIEPTQKIVTARELGLVGCVRCHQVWPEDTARCGRCGHALKSRDTKSLQRVWAFW
CCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LIGLMCYIPANIYPMLQTRMLFYVQDSTIIGGAVELIEYGSIGIALVILFASVAIPIGKF
HHHHHHHHCCCHHHHHHHHHHEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
IAIAFLAISLHRPTTVSNHQRQRLLEIVEYIGRWSMIDIFVVAILSSLVQLQLIVTINPG
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEEEECCC
AASIFFAAAVIFTMISAQSFDSRLIWDQINAQDEKPKNE
HHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]