| Definition | Roseobacter denitrificans OCh 114, complete genome. |
|---|---|
| Accession | NC_008209 |
| Length | 4,133,097 |
Click here to switch to the map view.
The map label for this gene is 110677485
Identifier: 110677485
GI number: 110677485
Start: 73014
End: 73127
Strand: Direct
Name: 110677485
Synonym: RD1_0070
Alternate gene names: NA
Gene position: 73014-73127 (Clockwise)
Preceding gene: 110677480
Following gene: 110677490
Centisome position: 1.77
GC content: 54.39
Gene sequence:
>114_bases GTGACGCCGCAGGTTGCGCTTTCTCCTTATATTGACCCTTACGCGCTTCTCGAACCCGCAACGCCAGCCGGTCTTGTTAC GCGTTTTTATCAACGCTGTGCGCCGTATTTCTGA
Upstream 100 bases:
>100_bases GGGTGGGGTGTCGTCGGCACTAGCAGTGGGCCAGCCTTCGCTCAATTGGGTAAACGAATGATTACCCTATCCTTTCGAAT AGTCGCTGCGACGAAAAAGA
Downstream 100 bases:
>100_bases CGGGCTGTTACGCATTGATGCAAACAGCCGGAAACAACTTTCACAAAATACCCGCATCACCAAGCAGAATTGGAATTCTT CAAAAACCCGATAAAGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 37; Mature: 36
Protein sequence:
>37_residues MTPQVALSPYIDPYALLEPATPAGLVTRFYQRCAPYF
Sequences:
>Translated_37_residues MTPQVALSPYIDPYALLEPATPAGLVTRFYQRCAPYF >Mature_36_residues TPQVALSPYIDPYALLEPATPAGLVTRFYQRCAPYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4162; Mature: 4031
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPQVALSPYIDPYALLEPATPAGLVTRFYQRCAPYF CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure TPQVALSPYIDPYALLEPATPAGLVTRFYQRCAPYF CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA