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The map label for this gene is 110677465

Identifier: 110677465

GI number: 110677465

Start: 46129

End: 46620

Strand: Direct

Name: 110677465

Synonym: RD1_0048

Alternate gene names: NA

Gene position: 46129-46620 (Clockwise)

Preceding gene: 110677462

Following gene: 110677466

Centisome position: 1.12

GC content: 61.59

Gene sequence:

>492_bases
ATGCAGAAGATATGGGTCACACAGATAATTACGGGCATGGCCGTGGCCGCCGCGCTGTCAGGCTGCGGCGTCGCGACTCC
CTCGAATGCCGTTATCGGTCCTCAAGCGGGCGACAACTTCACCAGCCAACGCGATAGAAACCGATCGTCCGGCACCACGA
TCTGGGATGCGTTTCGTGCTGGCGGTGGGGAACAGACCGTCGCAGTGAACAAATACCTTTGGGCCGCATCACTCGAAGTG
CTGAATTTCCTGCCCGTTGAGTCGGTTGATCCGTTCACCGGGGTCATCATTACCGGTTTCGGCACACCGCCGGGCAGCGG
GCGGGCCTATCGCGCGACCATTCTGATTGATGATCCCGCACTTGACGCGCGCTCCCTGAATGTGTCGCTGCAGACACGCA
ACGGGCCTGCCAGCGCGCCTGCCGTTCAGGCGGTCGAAAACGCCATCCTTAGCCGGGCGCGCCAGCTGCGCATTGCGGAT
GATGCGCTCTAA

Upstream 100 bases:

>100_bases
CCATCAGGCCCCTTCAGAGGACCCATTTGATGCCTGCCGCTTGCGGCACCCCGGCAAGTGAAGTAAGCCGTTGTAAAAGG
TCTATCGAGGCGGATTTTCG

Downstream 100 bases:

>100_bases
CCGGGACTGCACGTTGCAACGATGAAACGCAGCACAGGCCCGATCCAATTCCCGGCGCCGGGCTCCGCACAGATGACGGT
TCCCGGCGCTCTCACGTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MQKIWVTQIITGMAVAAALSGCGVATPSNAVIGPQAGDNFTSQRDRNRSSGTTIWDAFRAGGGEQTVAVNKYLWAASLEV
LNFLPVESVDPFTGVIITGFGTPPGSGRAYRATILIDDPALDARSLNVSLQTRNGPASAPAVQAVENAILSRARQLRIAD
DAL

Sequences:

>Translated_163_residues
MQKIWVTQIITGMAVAAALSGCGVATPSNAVIGPQAGDNFTSQRDRNRSSGTTIWDAFRAGGGEQTVAVNKYLWAASLEV
LNFLPVESVDPFTGVIITGFGTPPGSGRAYRATILIDDPALDARSLNVSLQTRNGPASAPAVQAVENAILSRARQLRIAD
DAL
>Mature_163_residues
MQKIWVTQIITGMAVAAALSGCGVATPSNAVIGPQAGDNFTSQRDRNRSSGTTIWDAFRAGGGEQTVAVNKYLWAASLEV
LNFLPVESVDPFTGVIITGFGTPPGSGRAYRATILIDDPALDARSLNVSLQTRNGPASAPAVQAVENAILSRARQLRIAD
DAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17054; Mature: 17054

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKIWVTQIITGMAVAAALSGCGVATPSNAVIGPQAGDNFTSQRDRNRSSGTTIWDAFRA
CCEEHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCHHCCCCCCCCCHHHHHHC
GGGEQTVAVNKYLWAASLEVLNFLPVESVDPFTGVIITGFGTPPGSGRAYRATILIDDPA
CCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCC
LDARSLNVSLQTRNGPASAPAVQAVENAILSRARQLRIADDAL
CCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQKIWVTQIITGMAVAAALSGCGVATPSNAVIGPQAGDNFTSQRDRNRSSGTTIWDAFRA
CCEEHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCHHCCCCCCCCCHHHHHHC
GGGEQTVAVNKYLWAASLEVLNFLPVESVDPFTGVIITGFGTPPGSGRAYRATILIDDPA
CCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEECCC
LDARSLNVSLQTRNGPASAPAVQAVENAILSRARQLRIADDAL
CCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA