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The map label for this gene is yiiR [H]

Identifier: 108813921

GI number: 108813921

Start: 4315514

End: 4315975

Strand: Reverse

Name: yiiR [H]

Synonym: YPN_3761

Alternate gene names: 108813921

Gene position: 4315975-4315514 (Counterclockwise)

Preceding gene: 108813924

Following gene: 108813916

Centisome position: 95.18

GC content: 51.08

Gene sequence:

>462_bases
ATGTTGGGTAAATGGATCTGTTCATCAATGACAATACAGCAGTGGTGTTTCTCATTTAAAGGCCGCATCGGGCGGCGAGA
ATTTTGGATCTGGATGGGGCTGTGGCTACTGGCAATGCTGGTTATTTTTACGTTGGCGGGGAAGGAGTGGCTCCCGATTC
AGTCAGCCTCGTTTGCGCTTGTTTTCTTACTGTGGCCAACGGCCGCCGTCGTCGTCAAGCGGCTACATGATCGTAATAAA
GCAGGCTGGTGGGCATTGTTGGCGGTGCTAGCCTGGATGCTGATGGCTGGAAATTGGCAGATGCTGACGCCTATTTGGCA
ATGGGGGGTTGGGCGATTTATCCCTACGCTTATTTTTGTCATGATGTTTATCGACTGCGGTGCTTTTCTTGGGACGGAAG
GTGATAACCGCTTTGGCCCAGAAGCGGTGCCAGTGAAATTTTTCGCTGATAAGGCGAAGTGA

Upstream 100 bases:

>100_bases
GTGTATAGAGAGGATTAAAGCGGTAATCAGTAGTCATTGTCAAAATTCACCGCAAAGATTATTGGTTAGTTGCGACCTTG
AGGTACACTTTGCCGAAATT

Downstream 100 bases:

>100_bases
CGTTTTTAGGTTAATGGCCAAATTGAAGTTAATAACCCAATATTCGCAGCAGAGAGCAGGCAGTGCGTAATTGTAAAACA
AGCGCCCTATCGGCTTGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MLGKWICSSMTIQQWCFSFKGRIGRREFWIWMGLWLLAMLVIFTLAGKEWLPIQSASFALVFLLWPTAAVVVKRLHDRNK
AGWWALLAVLAWMLMAGNWQMLTPIWQWGVGRFIPTLIFVMMFIDCGAFLGTEGDNRFGPEAVPVKFFADKAK

Sequences:

>Translated_153_residues
MLGKWICSSMTIQQWCFSFKGRIGRREFWIWMGLWLLAMLVIFTLAGKEWLPIQSASFALVFLLWPTAAVVVKRLHDRNK
AGWWALLAVLAWMLMAGNWQMLTPIWQWGVGRFIPTLIFVMMFIDCGAFLGTEGDNRFGPEAVPVKFFADKAK
>Mature_153_residues
MLGKWICSSMTIQQWCFSFKGRIGRREFWIWMGLWLLAMLVIFTLAGKEWLPIQSASFALVFLLWPTAAVVVKRLHDRNK
AGWWALLAVLAWMLMAGNWQMLTPIWQWGVGRFIPTLIFVMMFIDCGAFLGTEGDNRFGPEAVPVKFFADKAK

Specific function: Unknown

COG id: COG3152

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790355, Length=142, Percent_Identity=66.1971830985916, Blast_Score=200, Evalue=4e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008523 [H]

Pfam domain/function: PF05656 DUF805 [H]

EC number: NA

Molecular weight: Translated: 17650; Mature: 17650

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGKWICSSMTIQQWCFSFKGRIGRREFWIWMGLWLLAMLVIFTLAGKEWLPIQSASFAL
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
VFLLWPTAAVVVKRLHDRNKAGWWALLAVLAWMLMAGNWQMLTPIWQWGVGRFIPTLIFV
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
MMFIDCGAFLGTEGDNRFGPEAVPVKFFADKAK
HHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCC
>Mature Secondary Structure
MLGKWICSSMTIQQWCFSFKGRIGRREFWIWMGLWLLAMLVIFTLAGKEWLPIQSASFAL
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
VFLLWPTAAVVVKRLHDRNKAGWWALLAVLAWMLMAGNWQMLTPIWQWGVGRFIPTLIFV
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
MMFIDCGAFLGTEGDNRFGPEAVPVKFFADKAK
HHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]