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The map label for this gene is yidR [H]

Identifier: 108813892

GI number: 108813892

Start: 4283717

End: 4284028

Strand: Reverse

Name: yidR [H]

Synonym: YPN_3732

Alternate gene names: 108813892

Gene position: 4284028-4283717 (Counterclockwise)

Preceding gene: 108813897

Following gene: 108813891

Centisome position: 94.47

GC content: 52.56

Gene sequence:

>312_bases
ATGAATGCGCAAAAAAACCGTTTCTTACCGGAACAGCAGCTTACCTTTGATCCCAGAGGCCATCAGCTCACCAATATCAA
TGTCTGGACCCCGGATAGCCAGTGGTTGGCTTATGATGTGCGCCCTAGCGGGGGGACTTTTAACGGCTTAACGATTGAGC
AGGTAAATTGCATTACCGGTGAAATTGAGGTGATTTATCGTGCTCGACAGGGTGCTCATGTCGGGGTGGTGACCGTGAGT
CCTGATATGCCCGCGCCACTGGCTGCGTTCATCGCCGGATGGCAGTGCCATTGCTTGCCTGATGAACGATGA

Upstream 100 bases:

>100_bases
TGACGGGGCGTTCTGTGTGTCATAATGGCATACATATTCAGCAAAAAATGTCATTTGCAACTTATCATAAAAGAATTAAA
AGCATAAAAGAGTTGAAAAT

Downstream 100 bases:

>100_bases
TAACGGTGTGGTGCAGTTATGGTTGATCTCCCCTAATGGCGGAGAACTGCGCCAACTGACAGCGAGTCAATGGGGGATTC
AGTCTGCATTTAGCTGGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MNAQKNRFLPEQQLTFDPRGHQLTNINVWTPDSQWLAYDVRPSGGTFNGLTIEQVNCITGEIEVIYRARQGAHVGVVTVS
PDMPAPLAAFIAGWQCHCLPDER

Sequences:

>Translated_103_residues
MNAQKNRFLPEQQLTFDPRGHQLTNINVWTPDSQWLAYDVRPSGGTFNGLTIEQVNCITGEIEVIYRARQGAHVGVVTVS
PDMPAPLAAFIAGWQCHCLPDER
>Mature_103_residues
MNAQKNRFLPEQQLTFDPRGHQLTNINVWTPDSQWLAYDVRPSGGTFNGLTIEQVNCITGEIEVIYRARQGAHVGVVTVS
PDMPAPLAAFIAGWQCHCLPDER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI308199520, Length=70, Percent_Identity=72.8571428571428, Blast_Score=109, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR022223 [H]

Pfam domain/function: PF12566 DUF3748 [H]

EC number: NA

Molecular weight: Translated: 11506; Mature: 11506

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAQKNRFLPEQQLTFDPRGHQLTNINVWTPDSQWLAYDVRPSGGTFNGLTIEQVNCITG
CCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEEECC
EIEVIYRARQGAHVGVVTVSPDMPAPLAAFIAGWQCHCLPDER
CEEEEEEECCCCEEEEEEECCCCCCCHHHHHCCCEEEECCCCC
>Mature Secondary Structure
MNAQKNRFLPEQQLTFDPRGHQLTNINVWTPDSQWLAYDVRPSGGTFNGLTIEQVNCITG
CCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEEECC
EIEVIYRARQGAHVGVVTVSPDMPAPLAAFIAGWQCHCLPDER
CEEEEEEECCCCEEEEEEECCCCCCCHHHHHCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]