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The map label for this gene is yidR [H]

Identifier: 108813891

GI number: 108813891

Start: 4283413

End: 4283727

Strand: Reverse

Name: yidR [H]

Synonym: YPN_3731

Alternate gene names: 108813891

Gene position: 4283727-4283413 (Counterclockwise)

Preceding gene: 108813892

Following gene: 108813889

Centisome position: 94.47

GC content: 52.06

Gene sequence:

>315_bases
ATGAACGATGATAACGGTGTGGTGCAGTTATGGTTGATCTCCCCTAATGGCGGAGAACTGCGCCAACTGACAGCGAGTCA
ATGGGGGATTCAGTCTGCATTTAGCTGGAGCCCACAGGGAGAGCATTTGGCCTTTATCTGCGATAACAGCGTGATGTTGT
GCGATAGCCTAACCGGACATTTACGGCGGCTGACAGCCCGCAGCGTGGTGGCCCCGCTGGCTGACGCTGTGGTGTTTTCA
CCAAACGGTAAAAAGATCGCGTTTATGCGTGAGATCGATGGATGGGCACAAATTTTTACTGTGCATGCTGATTAG

Upstream 100 bases:

>100_bases
GCTCGACAGGGTGCTCATGTCGGGGTGGTGACCGTGAGTCCTGATATGCCCGCGCCACTGGCTGCGTTCATCGCCGGATG
GCAGTGCCATTGCTTGCCTG

Downstream 100 bases:

>100_bases
CATCGATAAAATCTATTGGCTGGATAGGATTGGGCGGATCTATTGTTTTGGCGTATCACCTGTCTGATTAGTTTGCTGGT
TTTGCATCTCGGATTGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MNDDNGVVQLWLISPNGGELRQLTASQWGIQSAFSWSPQGEHLAFICDNSVMLCDSLTGHLRRLTARSVVAPLADAVVFS
PNGKKIAFMREIDGWAQIFTVHAD

Sequences:

>Translated_104_residues
MNDDNGVVQLWLISPNGGELRQLTASQWGIQSAFSWSPQGEHLAFICDNSVMLCDSLTGHLRRLTARSVVAPLADAVVFS
PNGKKIAFMREIDGWAQIFTVHAD
>Mature_104_residues
MNDDNGVVQLWLISPNGGELRQLTASQWGIQSAFSWSPQGEHLAFICDNSVMLCDSLTGHLRRLTARSVVAPLADAVVFS
PNGKKIAFMREIDGWAQIFTVHAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI308199520, Length=90, Percent_Identity=53.3333333333333, Blast_Score=100, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR022223 [H]

Pfam domain/function: PF12566 DUF3748 [H]

EC number: NA

Molecular weight: Translated: 11427; Mature: 11427

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDDNGVVQLWLISPNGGELRQLTASQWGIQSAFSWSPQGEHLAFICDNSVMLCDSLTGH
CCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEEEHHHHHH
LRRLTARSVVAPLADAVVFSPNGKKIAFMREIDGWAQIFTVHAD
HHHHHHHHHHHHHHCEEEECCCCCEEEEEECCCCCEEEEEEECC
>Mature Secondary Structure
MNDDNGVVQLWLISPNGGELRQLTASQWGIQSAFSWSPQGEHLAFICDNSVMLCDSLTGH
CCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEEEHHHHHH
LRRLTARSVVAPLADAVVFSPNGKKIAFMREIDGWAQIFTVHAD
HHHHHHHHHHHHHHCEEEECCCCCEEEEEECCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]