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The map label for this gene is 108813332

Identifier: 108813332

GI number: 108813332

Start: 3576600

End: 3578261

Strand: Reverse

Name: 108813332

Synonym: YPN_3172

Alternate gene names: NA

Gene position: 3578261-3576600 (Counterclockwise)

Preceding gene: 108813333

Following gene: 108813331

Centisome position: 78.91

GC content: 63.36

Gene sequence:

>1662_bases
ATGAGTCGGTGGTGGCAACGTGGGTTGTGGCTCTGGGCGGGTTTGCTGGCGGTCATCTTGTGTCTGGCATTTCTGCCGCT
CTCCCCGTGGGGGCGCTGGCTGATGCTGGCATGGGTGGTGCTGATTTGCATGCTGGGCGGGTCGCGGGCAGGGCGGCAAG
CGGCCGGTGCATCCTCTGATCCGCTGTTCGCCGGGTTGGCAACTGAAAACGGTCTTCTGCCTGAAAACAGTCGCTTACCG
GTGGTGTTGGTATGTGGTGATGGTCTGGCGTCATGGTTTGGTCGCGAACGGTCACACCAGAGTGCACAGGGCTGCTGGCT
GCGGGTGGATGATATCAGCACCCTGCGGCAGTTTGCCCGACAACTGCTGTGGCAACGGCCGGAATGGGCCGCTCAGTTGG
CGGTGATGATGGTCGTGAACCCGCAGCAACGCCGCGATGAGCGCCTGCTGGCCGCCGATCTGCAAGAGCTGCGCTGGCAA
CTGATGCAACTGCGCCGCGATAGCCGCCATCCTGTTCCCTTGCTCCTGAGCAGCACGGTGGCCACCTCGGTTGCCCGTGA
TACGGTCTGGCTGTCACAGCAGCAGACACCGCCGCTGACACTCTGGTCAACCGTCTCGACGCCGGGCTCTCTGGCCGACT
GGCAGCGTGCGGAAAGCCGTGCCGTACAGGCTGAACGACTGAAACAGGCGGTGCTGTTCAGCAGCCAGCATGACTGGCTG
AACGCACAGGTGCTGCCGGTATTGCAGGCACCCAATGCGGATGTTGACCCCCTTGCCCCGCAACAGATTATTCAACAGCA
GGTTGCCAGTCTGGCCGATCCGGTGCCTGCCTCGCTGTGGCAGCACTGGCTGGCGGCGCATACCACGCTGACACAGGTGG
CGGGTTGGCATCCACCGCCGCCCGCCGCCCATGACGCCTTACCGCTGCCGGATTTTGTCTTTTCAGCGCTTCCTCTCGGC
AGCGGGGTGTCGTCACGCCGTCGGGTACTGCGCCATGGTGTCACCTTACTGACGTTGGCGGCGATGGTGGCGTTGTGCAG
CAGCGCCTGGCAGAACCGGCAACTGTTGCACCGGGTGGCCTTTGATATCCGTCAGTACCACAGCGTGGCGATGACGGATT
ATTCCCCGAAAGCGCAGGCGGTGGCGGTATTACACCGTGATGCGGGGCTGCTTGATGAAGGGTACCGCAACGGTGAACCG
CTGCGTCTGGGCCTGGGGTTATATCGGGGGGAGCGGCTGCGCCCGCCGCTGTTGGCGGCGATCAAAAGCTACATCCCGCC
GCCTCCTCCGCCTCCCGCGCCACCGGCGCCGAAAACCGTGCGTCTCGACAGCCTGTCACTGTTCGATGTGGGTAAATTCA
CGCTGAATGCGGGGTCCACCAAAATGCTGGTCACGGCGCTGATCGACATCAAAGCCAAACCCGGCTGGCTGATCGTGGTG
GCGGGTCACACCGACATCACCGGCGATGCGCAGGCCAACCACATTCTGTCGCTTAAACGCGCCGAAGCATTACGGGACTG
GATGCTGTCAACCAGCGACGTCTCGCCGACCTGCTTTGCGGTGCAAGGTTACGGGGCCACACGCCCTATCGGCCGACAAC
GATACTCCCGACGGTCGGGCGCTCAACCGCCGGGTCGAAATCAGTCTGGTACCGCAGGCTGA

Upstream 100 bases:

>100_bases
TACGGCTCGGGCTGGCTGCGCTGATGGTCGCGCTGTTGTGGTGGGGCCTTGATCACTGGCTGTCCGGTCTGTTAGCCACC
TTACTGCCGGAGCCGGTGTA

Downstream 100 bases:

>100_bases
TGCCTGTCAGGGGCCGGATGTAAAAACAGCGTCACAGGATGAAAGTGACGTATCAACGCAAGAAATGGAGAAGTAAACCA
TGGCAATTCCAGTTTATCTG

Product: PAL/OmpA-family membrane protein

Products: NA

Alternate protein names: Outer Membrane Protein; OmpA Domain-Containing Protein; OmpA/MotB Domain Protein; OmpA/MotB; OmpA Domain Protein; OmpA Family Membrane Protein

Number of amino acids: Translated: 553; Mature: 552

Protein sequence:

>553_residues
MSRWWQRGLWLWAGLLAVILCLAFLPLSPWGRWLMLAWVVLICMLGGSRAGRQAAGASSDPLFAGLATENGLLPENSRLP
VVLVCGDGLASWFGRERSHQSAQGCWLRVDDISTLRQFARQLLWQRPEWAAQLAVMMVVNPQQRRDERLLAADLQELRWQ
LMQLRRDSRHPVPLLLSSTVATSVARDTVWLSQQQTPPLTLWSTVSTPGSLADWQRAESRAVQAERLKQAVLFSSQHDWL
NAQVLPVLQAPNADVDPLAPQQIIQQQVASLADPVPASLWQHWLAAHTTLTQVAGWHPPPPAAHDALPLPDFVFSALPLG
SGVSSRRRVLRHGVTLLTLAAMVALCSSAWQNRQLLHRVAFDIRQYHSVAMTDYSPKAQAVAVLHRDAGLLDEGYRNGEP
LRLGLGLYRGERLRPPLLAAIKSYIPPPPPPPAPPAPKTVRLDSLSLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVV
AGHTDITGDAQANHILSLKRAEALRDWMLSTSDVSPTCFAVQGYGATRPIGRQRYSRRSGAQPPGRNQSGTAG

Sequences:

>Translated_553_residues
MSRWWQRGLWLWAGLLAVILCLAFLPLSPWGRWLMLAWVVLICMLGGSRAGRQAAGASSDPLFAGLATENGLLPENSRLP
VVLVCGDGLASWFGRERSHQSAQGCWLRVDDISTLRQFARQLLWQRPEWAAQLAVMMVVNPQQRRDERLLAADLQELRWQ
LMQLRRDSRHPVPLLLSSTVATSVARDTVWLSQQQTPPLTLWSTVSTPGSLADWQRAESRAVQAERLKQAVLFSSQHDWL
NAQVLPVLQAPNADVDPLAPQQIIQQQVASLADPVPASLWQHWLAAHTTLTQVAGWHPPPPAAHDALPLPDFVFSALPLG
SGVSSRRRVLRHGVTLLTLAAMVALCSSAWQNRQLLHRVAFDIRQYHSVAMTDYSPKAQAVAVLHRDAGLLDEGYRNGEP
LRLGLGLYRGERLRPPLLAAIKSYIPPPPPPPAPPAPKTVRLDSLSLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVV
AGHTDITGDAQANHILSLKRAEALRDWMLSTSDVSPTCFAVQGYGATRPIGRQRYSRRSGAQPPGRNQSGTAG
>Mature_552_residues
SRWWQRGLWLWAGLLAVILCLAFLPLSPWGRWLMLAWVVLICMLGGSRAGRQAAGASSDPLFAGLATENGLLPENSRLPV
VLVCGDGLASWFGRERSHQSAQGCWLRVDDISTLRQFARQLLWQRPEWAAQLAVMMVVNPQQRRDERLLAADLQELRWQL
MQLRRDSRHPVPLLLSSTVATSVARDTVWLSQQQTPPLTLWSTVSTPGSLADWQRAESRAVQAERLKQAVLFSSQHDWLN
AQVLPVLQAPNADVDPLAPQQIIQQQVASLADPVPASLWQHWLAAHTTLTQVAGWHPPPPAAHDALPLPDFVFSALPLGS
GVSSRRRVLRHGVTLLTLAAMVALCSSAWQNRQLLHRVAFDIRQYHSVAMTDYSPKAQAVAVLHRDAGLLDEGYRNGEPL
RLGLGLYRGERLRPPLLAAIKSYIPPPPPPPAPPAPKTVRLDSLSLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVA
GHTDITGDAQANHILSLKRAEALRDWMLSTSDVSPTCFAVQGYGATRPIGRQRYSRRSGAQPPGRNQSGTAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60846; Mature: 60715

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRWWQRGLWLWAGLLAVILCLAFLPLSPWGRWLMLAWVVLICMLGGSRAGRQAAGASSD
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PLFAGLATENGLLPENSRLPVVLVCGDGLASWFGRERSHQSAQGCWLRVDDISTLRQFAR
CEEEEECCCCCCCCCCCCCCEEEEECCHHHHHHCCHHCCCCCCCCEEEECCHHHHHHHHH
QLLWQRPEWAAQLAVMMVVNPQQRRDERLLAADLQELRWQLMQLRRDSRHPVPLLLSSTV
HHHCCCCHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
ATSVARDTVWLSQQQTPPLTLWSTVSTPGSLADWQRAESRAVQAERLKQAVLFSSQHDWL
HHHHHHHHHEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NAQVLPVLQAPNADVDPLAPQQIIQQQVASLADPVPASLWQHWLAAHTTLTQVAGWHPPP
CCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
PAAHDALPLPDFVFSALPLGSGVSSRRRVLRHGVTLLTLAAMVALCSSAWQNRQLLHRVA
CCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FDIRQYHSVAMTDYSPKAQAVAVLHRDAGLLDEGYRNGEPLRLGLGLYRGERLRPPLLAA
HHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHCCCCCCCEEEECCHHCCCCCCCHHHHH
IKSYIPPPPPPPAPPAPKTVRLDSLSLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVV
HHHHCCCCCCCCCCCCCCEEEECCCCEEECCCEEECCCCHHHHHHHHHHEECCCCEEEEE
AGHTDITGDAQANHILSLKRAEALRDWMLSTSDVSPTCFAVQGYGATRPIGRQRYSRRSG
ECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCC
AQPPGRNQSGTAG
CCCCCCCCCCCCC
>Mature Secondary Structure 
SRWWQRGLWLWAGLLAVILCLAFLPLSPWGRWLMLAWVVLICMLGGSRAGRQAAGASSD
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PLFAGLATENGLLPENSRLPVVLVCGDGLASWFGRERSHQSAQGCWLRVDDISTLRQFAR
CEEEEECCCCCCCCCCCCCCEEEEECCHHHHHHCCHHCCCCCCCCEEEECCHHHHHHHHH
QLLWQRPEWAAQLAVMMVVNPQQRRDERLLAADLQELRWQLMQLRRDSRHPVPLLLSSTV
HHHCCCCHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
ATSVARDTVWLSQQQTPPLTLWSTVSTPGSLADWQRAESRAVQAERLKQAVLFSSQHDWL
HHHHHHHHHEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NAQVLPVLQAPNADVDPLAPQQIIQQQVASLADPVPASLWQHWLAAHTTLTQVAGWHPPP
CCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
PAAHDALPLPDFVFSALPLGSGVSSRRRVLRHGVTLLTLAAMVALCSSAWQNRQLLHRVA
CCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FDIRQYHSVAMTDYSPKAQAVAVLHRDAGLLDEGYRNGEPLRLGLGLYRGERLRPPLLAA
HHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHCCCCCCCEEEECCHHCCCCCCCHHHHH
IKSYIPPPPPPPAPPAPKTVRLDSLSLFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVV
HHHHCCCCCCCCCCCCCCEEEECCCCEEECCCEEECCCCHHHHHHHHHHEECCCCEEEEE
AGHTDITGDAQANHILSLKRAEALRDWMLSTSDVSPTCFAVQGYGATRPIGRQRYSRRSG
ECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCC
AQPPGRNQSGTAG
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA