Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108813328

Identifier: 108813328

GI number: 108813328

Start: 3568381

End: 3570534

Strand: Reverse

Name: 108813328

Synonym: YPN_3168

Alternate gene names: NA

Gene position: 3570534-3568381 (Counterclockwise)

Preceding gene: 108813329

Following gene: 108813327

Centisome position: 78.74

GC content: 43.36

Gene sequence:

>2154_bases
ATGATGCCTGTCAGTTCCCGCAGAGGATATCCTCTTAATACGTCGGATTCATGGCATGGCGGGATACATATACCGCATAC
GGACTCAGGCGCATTGCCTGAGAAGGTCAGGGCAATAGCTGACGGTACGGTCGTGTCGTTTCGAATGCCTTCAAAACCCT
GGGAAAGAGATCAATTCCCGCTGAAGTATTCGCCTCTCAGAGGAACGGATGATGGTTATGTTTTATTGAAACATGAGACT
GAAATCGGTTCCGGTGACGACGGGAAGGTTGTTTTTTACTCCTTGTACATGCATCTGAAACATCTTGAAGCAGAGATTAA
AACTGACGCTAAAATCTATCGTAAAGCCCCGCTGGGTTCTTCGGGAATGACTGATGGGCAGAATGAATTTCATTTCCAGA
TTTTCTGTGATGAGGCAAATACCAGGAAATTGGTCGGTAGAACTACTGGCGAGTTAAATATTAATGAAAGTGGCCGGAAA
GATGTTGTCTATGGCGATATTCATTTTTATCTGCCTGCAGGAACGAAATTTTATGAGGCGCGGCCTTCGGCTAATATAGC
TACCACAACGAACTTGAATGAAGTGCATACCAGTGCGGTTCCGTTGTACGCAAGCATGAGTCTCAGTAAAGGGGCAGGCA
CGATGATTACGCGACAGGCATGTGCGAATGCAGAAGGTGCCTTTGAGCCTGTTGGCTCACCTCTGGTCAATGCCGACGGC
AAGGACTATGAATACAACCTTTATAAAACAGCCACCTCACGCTATCCGCAAAGTCCGAGTGCCGGGTATGAACTGCTGCG
CTTTGGGCGCATTATCAACACTGAACATGAAACCCTGGTTCCTGCTGATGCCCCCTTATGGATGACCGTAAATTATCCCG
GTGGACAAGGTGTTGTGAACCTAGCCGTAGCAACTGTTAAAAAGTTCAGCGATGCAGATTTTCCCCACTGGACGGGATGG
CAGCTGATTGATGATGATAAAGACATGCATAGCCAGTGCAACTCAGCGGCAATAAGAAAGCTCAGGGAAAAAGACAGGTA
TGCAGCACAAAGCAGCAAACTTATCTGCTGTATTCCGTTTGAGTGGGAAAAAAGTACTATTGATACCCGATATAAATGGC
TGATGACTGGTCTGCCTTGGGAGCAGTGCACGCCGGAAAAAACCGCAACATGGCAAATACCGGGATCTCAGGAATCGAAG
GATCGAATTCTGATGAACGAAGAAGACTACGGTAGGTTTAAACAGCATGCAGAAGCCCTATGCTTTGATTCAGGGGCCTT
GGGGTCAGGGAAAGTATGGCATTTTGATCCGCGTGGGTTTATTGAGAATTTTAGGAAAAGTAGATGGTTAGATGAGATAG
ATTTAAGTAGGGTTTACTCCACTACAGCTAAAGATGTTAGGGAAAAATATCGTACTTCTATAAATTTTATATTAATTAAA
TATGGCATGAATAATCCAATACGCACAGCTCATTTCTTGGGGCAGGGTGCAATTGAATCACAAAACTTAAATCTTATGGT
TGAGGGCTCTGTTTCATTTAGCCGTCATCCTGATCATCCATCATTTGCCGAAGAAATTAATGGCTATTATGCTGACCCGA
CAGATATTTATGGTTATTTCCACAATTATGAGCGTGAAGGTAATGATTTGGGGAATATCACTAAAAGCGATTTAAGAGAT
TCAAGAAATAATCTTTTGACTGTAGTTATCGGAAGGGACTCAAATAATAGGCCGATTTTAACTGCGCCTCAAAGGAGAAC
TATTGATTCAAATTTATCTCATATTGGAGATGGGATGAAATTTCGAGGGCGAGGATTTAAACAGTTAACCGGCCTAGCGA
ATTACACGGGATATTGGACTTATAGAGGATGGTTGCGTAGTACGGATTATGATAATAGTTGGTGGCGAAATCCCAATCGG
TTAAGGGTTCCTTTAATCGATAACCCTCAAAATATATCGACAGAACCGTATAATTGTATTGACTCTGGAGGGCAATTCGT
AGCAAAAAATGGAGTTTTACGAAGAGCAGATGCAGGGGTTACACGCGATAGTTCAAGATCTGTTAGCATGGTAATAAACA
GATGGGATCAGCAATCTTTTGAGCGCAGATTTCAATCAACGCAAAATACATATTCTATTGTTGGTGATGAGTAA

Upstream 100 bases:

>100_bases
ATTTCACTTTTTCCTGACAAGGAGTCACAACATGATTATCAGTCCTCCATTTCTGAGAGATAGAGATGCAACCCAGTCAG
ATGCTGACTGGGTTGACGCG

Downstream 100 bases:

>100_bases
ATGAAAACTATTATGATGTTTTTTTTGATTTTGTTTGCGAATTCATGTTATAGCGGGGAAGAGCATAAATCAACCCCTCT
GGGAGAGGCTGCTATAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 717; Mature: 717

Protein sequence:

>717_residues
MMPVSSRRGYPLNTSDSWHGGIHIPHTDSGALPEKVRAIADGTVVSFRMPSKPWERDQFPLKYSPLRGTDDGYVLLKHET
EIGSGDDGKVVFYSLYMHLKHLEAEIKTDAKIYRKAPLGSSGMTDGQNEFHFQIFCDEANTRKLVGRTTGELNINESGRK
DVVYGDIHFYLPAGTKFYEARPSANIATTTNLNEVHTSAVPLYASMSLSKGAGTMITRQACANAEGAFEPVGSPLVNADG
KDYEYNLYKTATSRYPQSPSAGYELLRFGRIINTEHETLVPADAPLWMTVNYPGGQGVVNLAVATVKKFSDADFPHWTGW
QLIDDDKDMHSQCNSAAIRKLREKDRYAAQSSKLICCIPFEWEKSTIDTRYKWLMTGLPWEQCTPEKTATWQIPGSQESK
DRILMNEEDYGRFKQHAEALCFDSGALGSGKVWHFDPRGFIENFRKSRWLDEIDLSRVYSTTAKDVREKYRTSINFILIK
YGMNNPIRTAHFLGQGAIESQNLNLMVEGSVSFSRHPDHPSFAEEINGYYADPTDIYGYFHNYEREGNDLGNITKSDLRD
SRNNLLTVVIGRDSNNRPILTAPQRRTIDSNLSHIGDGMKFRGRGFKQLTGLANYTGYWTYRGWLRSTDYDNSWWRNPNR
LRVPLIDNPQNISTEPYNCIDSGGQFVAKNGVLRRADAGVTRDSSRSVSMVINRWDQQSFERRFQSTQNTYSIVGDE

Sequences:

>Translated_717_residues
MMPVSSRRGYPLNTSDSWHGGIHIPHTDSGALPEKVRAIADGTVVSFRMPSKPWERDQFPLKYSPLRGTDDGYVLLKHET
EIGSGDDGKVVFYSLYMHLKHLEAEIKTDAKIYRKAPLGSSGMTDGQNEFHFQIFCDEANTRKLVGRTTGELNINESGRK
DVVYGDIHFYLPAGTKFYEARPSANIATTTNLNEVHTSAVPLYASMSLSKGAGTMITRQACANAEGAFEPVGSPLVNADG
KDYEYNLYKTATSRYPQSPSAGYELLRFGRIINTEHETLVPADAPLWMTVNYPGGQGVVNLAVATVKKFSDADFPHWTGW
QLIDDDKDMHSQCNSAAIRKLREKDRYAAQSSKLICCIPFEWEKSTIDTRYKWLMTGLPWEQCTPEKTATWQIPGSQESK
DRILMNEEDYGRFKQHAEALCFDSGALGSGKVWHFDPRGFIENFRKSRWLDEIDLSRVYSTTAKDVREKYRTSINFILIK
YGMNNPIRTAHFLGQGAIESQNLNLMVEGSVSFSRHPDHPSFAEEINGYYADPTDIYGYFHNYEREGNDLGNITKSDLRD
SRNNLLTVVIGRDSNNRPILTAPQRRTIDSNLSHIGDGMKFRGRGFKQLTGLANYTGYWTYRGWLRSTDYDNSWWRNPNR
LRVPLIDNPQNISTEPYNCIDSGGQFVAKNGVLRRADAGVTRDSSRSVSMVINRWDQQSFERRFQSTQNTYSIVGDE
>Mature_717_residues
MMPVSSRRGYPLNTSDSWHGGIHIPHTDSGALPEKVRAIADGTVVSFRMPSKPWERDQFPLKYSPLRGTDDGYVLLKHET
EIGSGDDGKVVFYSLYMHLKHLEAEIKTDAKIYRKAPLGSSGMTDGQNEFHFQIFCDEANTRKLVGRTTGELNINESGRK
DVVYGDIHFYLPAGTKFYEARPSANIATTTNLNEVHTSAVPLYASMSLSKGAGTMITRQACANAEGAFEPVGSPLVNADG
KDYEYNLYKTATSRYPQSPSAGYELLRFGRIINTEHETLVPADAPLWMTVNYPGGQGVVNLAVATVKKFSDADFPHWTGW
QLIDDDKDMHSQCNSAAIRKLREKDRYAAQSSKLICCIPFEWEKSTIDTRYKWLMTGLPWEQCTPEKTATWQIPGSQESK
DRILMNEEDYGRFKQHAEALCFDSGALGSGKVWHFDPRGFIENFRKSRWLDEIDLSRVYSTTAKDVREKYRTSINFILIK
YGMNNPIRTAHFLGQGAIESQNLNLMVEGSVSFSRHPDHPSFAEEINGYYADPTDIYGYFHNYEREGNDLGNITKSDLRD
SRNNLLTVVIGRDSNNRPILTAPQRRTIDSNLSHIGDGMKFRGRGFKQLTGLANYTGYWTYRGWLRSTDYDNSWWRNPNR
LRVPLIDNPQNISTEPYNCIDSGGQFVAKNGVLRRADAGVTRDSSRSVSMVINRWDQQSFERRFQSTQNTYSIVGDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81206; Mature: 81206

Theoretical pI: Translated: 7.31; Mature: 7.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPVSSRRGYPLNTSDSWHGGIHIPHTDSGALPEKVRAIADGTVVSFRMPSKPWERDQFP
CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCC
LKYSPLRGTDDGYVLLKHETEIGSGDDGKVVFYSLYMHLKHLEAEIKTDAKIYRKAPLGS
EEECCCCCCCCCEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHEECCCCC
SGMTDGQNEFHFQIFCDEANTRKLVGRTTGELNINESGRKDVVYGDIHFYLPAGTKFYEA
CCCCCCCCCEEEEEEECCCCCCEEEECCCCEEEECCCCCCCEEEEEEEEEECCCCEEEEC
RPSANIATTTNLNEVHTSAVPLYASMSLSKGAGTMITRQACANAEGAFEPVGSPLVNADG
CCCCCEEEECCCHHHHCCCCCEEEEEECCCCCCCEEEHHHHCCCCCCCCCCCCCEECCCC
KDYEYNLYKTATSRYPQSPSAGYELLRFGRIINTEHETLVPADAPLWMTVNYPGGQGVVN
CCEEEEEEEEHHHCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCEEEEEECCCCCCHHH
LAVATVKKFSDADFPHWTGWQLIDDDKDMHSQCNSAAIRKLREKDRYAAQSSKLICCIPF
HHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
EWEKSTIDTRYKWLMTGLPWEQCTPEKTATWQIPGSQESKDRILMNEEDYGRFKQHAEAL
CCCCCCHHHHEEEEECCCCHHHCCCCCCEEEECCCCCCCCCCEEECCCHHHHHHHHHHHE
CFDSGALGSGKVWHFDPRGFIENFRKSRWLDEIDLSRVYSTTAKDVREKYRTSINFILIK
EECCCCCCCCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
YGMNNPIRTAHFLGQGAIESQNLNLMVEGSVSFSRHPDHPSFAEEINGYYADPTDIYGYF
ECCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCEECCHHHHHHHH
HNYEREGNDLGNITKSDLRDSRNNLLTVVIGRDSNNRPILTAPQRRTIDSNLSHIGDGMK
HCCCCCCCCCCCCCHHHHHCCCCCEEEEEEECCCCCCCEEECCCCCCHHHHHHHHCCCCE
FRGRGFKQLTGLANYTGYWTYRGWLRSTDYDNSWWRNPNRLRVPLIDNPQNISTEPYNCI
ECCCCHHHHHCCCCCCEEEEEECEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHH
DSGGQFVAKNGVLRRADAGVTRDSSRSVSMVINRWDQQSFERRFQSTQNTYSIVGDE
CCCCCEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
>Mature Secondary Structure
MMPVSSRRGYPLNTSDSWHGGIHIPHTDSGALPEKVRAIADGTVVSFRMPSKPWERDQFP
CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCC
LKYSPLRGTDDGYVLLKHETEIGSGDDGKVVFYSLYMHLKHLEAEIKTDAKIYRKAPLGS
EEECCCCCCCCCEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHEECCCCC
SGMTDGQNEFHFQIFCDEANTRKLVGRTTGELNINESGRKDVVYGDIHFYLPAGTKFYEA
CCCCCCCCCEEEEEEECCCCCCEEEECCCCEEEECCCCCCCEEEEEEEEEECCCCEEEEC
RPSANIATTTNLNEVHTSAVPLYASMSLSKGAGTMITRQACANAEGAFEPVGSPLVNADG
CCCCCEEEECCCHHHHCCCCCEEEEEECCCCCCCEEEHHHHCCCCCCCCCCCCCEECCCC
KDYEYNLYKTATSRYPQSPSAGYELLRFGRIINTEHETLVPADAPLWMTVNYPGGQGVVN
CCEEEEEEEEHHHCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCEEEEEECCCCCCHHH
LAVATVKKFSDADFPHWTGWQLIDDDKDMHSQCNSAAIRKLREKDRYAAQSSKLICCIPF
HHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
EWEKSTIDTRYKWLMTGLPWEQCTPEKTATWQIPGSQESKDRILMNEEDYGRFKQHAEAL
CCCCCCHHHHEEEEECCCCHHHCCCCCCEEEECCCCCCCCCCEEECCCHHHHHHHHHHHE
CFDSGALGSGKVWHFDPRGFIENFRKSRWLDEIDLSRVYSTTAKDVREKYRTSINFILIK
EECCCCCCCCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
YGMNNPIRTAHFLGQGAIESQNLNLMVEGSVSFSRHPDHPSFAEEINGYYADPTDIYGYF
ECCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHCCCEECCHHHHHHHH
HNYEREGNDLGNITKSDLRDSRNNLLTVVIGRDSNNRPILTAPQRRTIDSNLSHIGDGMK
HCCCCCCCCCCCCCHHHHHCCCCCEEEEEEECCCCCCCEEECCCCCCHHHHHHHHCCCCE
FRGRGFKQLTGLANYTGYWTYRGWLRSTDYDNSWWRNPNRLRVPLIDNPQNISTEPYNCI
ECCCCHHHHHCCCCCCEEEEEECEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHH
DSGGQFVAKNGVLRRADAGVTRDSSRSVSMVINRWDQQSFERRFQSTQNTYSIVGDE
CCCCCEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA