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The map label for this gene is yggE [H]

Identifier: 108813276

GI number: 108813276

Start: 3504482

End: 3505282

Strand: Reverse

Name: yggE [H]

Synonym: YPN_3116

Alternate gene names: 108813276

Gene position: 3505282-3504482 (Counterclockwise)

Preceding gene: 108813277

Following gene: 108813274

Centisome position: 77.3

GC content: 49.44

Gene sequence:

>801_bases
ATGCATATCTTAGGAGGCACCGTGAAGTTGAAGACATTGGCTTTGGCCGCAATGATAGGATTAGGGACGTTACCTTTGGC
GCTGCAAGCTCAAGCGGCCGAAGTGCCAGAAGGGCCGCATGTTGTCACCTCAGGTACCGCCAGCGTTGAGGCAACCCCAG
ATATCGCGACTATCGCAATTGAAGTCAGTGTATCTGCCAAAGATGCTGCAGATGCCAAAAAGCAGGTCGATACCCGCGTC
GCGCAATACTTTGATTTCCTAAATAAAAGTGGCATTGAAAAGAAAGATGTCAAGGCCGCTAATATTCGTACCCAGCCTGA
ATATGACTACCAGAAAAGCGGTGAAGCCGTATTGAAAGGTTACCGTGCTGTGCGTCAGGTTCAGGTGACATTGCGCCAGT
TGGATAAATTAAATGATTTGCTGGATGGTGCGTTGAAATCGGGTCTGAATGAGATCCGTGCCGTTGAGTTGGGTGTTGCC
AGCCCAGAAACCTACCGTGAGCAGGCGCGTAAAAAAGCCATTGAGAATACGATTACGCAGGCCGGCGCACTGGCCGATGG
ATTTAAAGTTAAATTAGGCCCGGTTTATAGCATTCGTTACCATATAGCGAATTACCAGCCAATGCCGGTAGCTCGAATGT
ATAAAAGTGCTGGAGCGGCATCCGACACGGCGGTGGAGCAAACCTACGAACAACAGACCATCAATTTTGATGATCAGGTT
GATGTGGTCTTTGAGCTGCAAACGGGAGCCAACCCGGCATCGATCGCAGCTACTGCCAATAAAACAGTTGCTGCTCAGTA
A

Upstream 100 bases:

>100_bases
TTATTAACAATGAGTGATCAACGGCGAATGAATCGCGATGTTAATGGAATTTCAGTGAGTGTCGTGCACTGATTCTCTGA
CAGGTGCAGGTTCATTTGTC

Downstream 100 bases:

>100_bases
ACATAAACAGCTACTGCCCAATAAACGAGTCCTGTCGTAATACCTGACGCCCGTAGGATAAGAGGGCGTCAGTAACCTTT
CTCATGGTCCGGCTTTCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MHILGGTVKLKTLALAAMIGLGTLPLALQAQAAEVPEGPHVVTSGTASVEATPDIATIAIEVSVSAKDAADAKKQVDTRV
AQYFDFLNKSGIEKKDVKAANIRTQPEYDYQKSGEAVLKGYRAVRQVQVTLRQLDKLNDLLDGALKSGLNEIRAVELGVA
SPETYREQARKKAIENTITQAGALADGFKVKLGPVYSIRYHIANYQPMPVARMYKSAGAASDTAVEQTYEQQTINFDDQV
DVVFELQTGANPASIAATANKTVAAQ

Sequences:

>Translated_266_residues
MHILGGTVKLKTLALAAMIGLGTLPLALQAQAAEVPEGPHVVTSGTASVEATPDIATIAIEVSVSAKDAADAKKQVDTRV
AQYFDFLNKSGIEKKDVKAANIRTQPEYDYQKSGEAVLKGYRAVRQVQVTLRQLDKLNDLLDGALKSGLNEIRAVELGVA
SPETYREQARKKAIENTITQAGALADGFKVKLGPVYSIRYHIANYQPMPVARMYKSAGAASDTAVEQTYEQQTINFDDQV
DVVFELQTGANPASIAATANKTVAAQ
>Mature_266_residues
MHILGGTVKLKTLALAAMIGLGTLPLALQAQAAEVPEGPHVVTSGTASVEATPDIATIAIEVSVSAKDAADAKKQVDTRV
AQYFDFLNKSGIEKKDVKAANIRTQPEYDYQKSGEAVLKGYRAVRQVQVTLRQLDKLNDLLDGALKSGLNEIRAVELGVA
SPETYREQARKKAIENTITQAGALADGFKVKLGPVYSIRYHIANYQPMPVARMYKSAGAASDTAVEQTYEQQTINFDDQV
DVVFELQTGANPASIAATANKTVAAQ

Specific function: Unknown

COG id: COG2968

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789289, Length=240, Percent_Identity=63.3333333333333, Blast_Score=292, Evalue=2e-80,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007497 [H]

Pfam domain/function: PF04402 DUF541 [H]

EC number: NA

Molecular weight: Translated: 28477; Mature: 28477

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHILGGTVKLKTLALAAMIGLGTLPLALQAQAAEVPEGPHVVTSGTASVEATPDIATIAI
CCCCCCCHHHHHHHHHHHHHCCCCCHHEECHHHCCCCCCEEEECCCCCEECCCCEEEEEE
EVSVSAKDAADAKKQVDTRVAQYFDFLNKSGIEKKDVKAANIRTQPEYDYQKSGEAVLKG
EEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCHHHCCHHHHHH
YRAVRQVQVTLRQLDKLNDLLDGALKSGLNEIRAVELGVASPETYREQARKKAIENTITQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHH
AGALADGFKVKLGPVYSIRYHIANYQPMPVARMYKSAGAASDTAVEQTYEQQTINFDDQV
HHCCCCCCEEEECCEEEEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCE
DVVFELQTGANPASIAATANKTVAAQ
EEEEEEECCCCCHHEEEECCCCCCCC
>Mature Secondary Structure
MHILGGTVKLKTLALAAMIGLGTLPLALQAQAAEVPEGPHVVTSGTASVEATPDIATIAI
CCCCCCCHHHHHHHHHHHHHCCCCCHHEECHHHCCCCCCEEEECCCCCEECCCCEEEEEE
EVSVSAKDAADAKKQVDTRVAQYFDFLNKSGIEKKDVKAANIRTQPEYDYQKSGEAVLKG
EEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCHHHCCHHHHHH
YRAVRQVQVTLRQLDKLNDLLDGALKSGLNEIRAVELGVASPETYREQARKKAIENTITQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHH
AGALADGFKVKLGPVYSIRYHIANYQPMPVARMYKSAGAASDTAVEQTYEQQTINFDDQV
HHCCCCCCEEEECCEEEEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCE
DVVFELQTGANPASIAATANKTVAAQ
EEEEEEECCCCCHHEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12542086 [H]