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The map label for this gene is mqsR [H]

Identifier: 108813241

GI number: 108813241

Start: 3465942

End: 3466238

Strand: Reverse

Name: mqsR [H]

Synonym: YPN_3081

Alternate gene names: 108813241

Gene position: 3466238-3465942 (Counterclockwise)

Preceding gene: 108813242

Following gene: 108813240

Centisome position: 76.44

GC content: 39.06

Gene sequence:

>297_bases
ATGGAGAAACGGACTCCGCATACTCGTTTATTAAAAGTAAAAGAATTGGTATTGAAGGGGAATATTAAAACGACACGAAC
TGCCAGAGATGGGGCTGAGGAACTGGGACTGAGTTTTAGAGATATGTGTGATGCAGTTTCCGAACTGATTAGCGCCGATT
TTTATAAAAGTATGACGACACATCAAGATCATACCATTTGGCAGGATGTTTACCGTCCTATGCTTTCTTGCGGTAGAGTT
TATTTGAAAATCACGGTTATCGATGATGTTTTGAATGTCTCGTTTAAGGAGATTTAA

Upstream 100 bases:

>100_bases
AAATCACGCTCACAAACAAACCTAATAGGTTAATGACTTGCTATAAATAACCTACTAGGTTATATTTATTAAGTGGAAAT
TGCTCAAGGATGGCAATGAA

Downstream 100 bases:

>100_bases
TGATGAAATGTCCAGTTTGTGGCGGTGTAGAATTAATCCACGAAGCGCGTGACGTTCCCTTTACCTATAAAGGGCGTAAG
TTCATCGTCGAAGGCGTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MEKRTPHTRLLKVKELVLKGNIKTTRTARDGAEELGLSFRDMCDAVSELISADFYKSMTTHQDHTIWQDVYRPMLSCGRV
YLKITVIDDVLNVSFKEI

Sequences:

>Translated_98_residues
MEKRTPHTRLLKVKELVLKGNIKTTRTARDGAEELGLSFRDMCDAVSELISADFYKSMTTHQDHTIWQDVYRPMLSCGRV
YLKITVIDDVLNVSFKEI
>Mature_98_residues
MEKRTPHTRLLKVKELVLKGNIKTTRTARDGAEELGLSFRDMCDAVSELISADFYKSMTTHQDHTIWQDVYRPMLSCGRV
YLKITVIDDVLNVSFKEI

Specific function: AI-2 controlled regulator that controls biofilm formation. Controls biofilm formation by inducing motility through the activation of qseBC and csrA. This leads to the activation of the master flagellum regulon flhDC, of fliA, motA and crl [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789399, Length=97, Percent_Identity=67.0103092783505, Blast_Score=133, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11319; Mature: 11319

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKRTPHTRLLKVKELVLKGNIKTTRTARDGAEELGLSFRDMCDAVSELISADFYKSMTT
CCCCCCHHHHHHHHHHHHHCCCCCCCCHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
HQDHTIWQDVYRPMLSCGRVYLKITVIDDVLNVSFKEI
CCCHHHHHHHHHHHHHCCHHHEEEEHHHHHHHHHHHCC
>Mature Secondary Structure
MEKRTPHTRLLKVKELVLKGNIKTTRTARDGAEELGLSFRDMCDAVSELISADFYKSMTT
CCCCCCHHHHHHHHHHHHHCCCCCCCCHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
HQDHTIWQDVYRPMLSCGRVYLKITVIDDVLNVSFKEI
CCCHHHHHHHHHHHHHCCHHHEEEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]