| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is 108813231
Identifier: 108813231
GI number: 108813231
Start: 3457087
End: 3457281
Strand: Reverse
Name: 108813231
Synonym: YPN_3071
Alternate gene names: NA
Gene position: 3457281-3457087 (Counterclockwise)
Preceding gene: 108813232
Following gene: 108813230
Centisome position: 76.24
GC content: 38.97
Gene sequence:
>195_bases ATGAGTGATGAATATTCATGTCAGTGCTGCGGATCAAAAACAATAGATAATCTTGGGGATTATGAAATTTGCCCTATTTG TAAATGGGAGGATGACCCAATCCAGTCCAAAGAACCTGATTATGTAGGTGGAGCAAATAAAATGAGCCTCAACGAAGCCA AAGAAGCCTACAAGCAAGGACGAAAGGTTATATAA
Upstream 100 bases:
>100_bases TTTACCATCCACAGTTAAATACGTTTGCAGTAAAGACAAAAGATGGAGTGCCTAAAACGATGTTTAAGCCGTCAGACAAA ATGGGATATTGGAATAAACA
Downstream 100 bases:
>100_bases CCGGTAGGGGGATCTGAAGCCCCTTTATCTGTATTCGCTACCCAATCAAGGCCACTGTCAGCTGAACTGACCCCATAAAG TTGGACGGTTTATCAGCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 64; Mature: 63
Protein sequence:
>64_residues MSDEYSCQCCGSKTIDNLGDYEICPICKWEDDPIQSKEPDYVGGANKMSLNEAKEAYKQGRKVI
Sequences:
>Translated_64_residues MSDEYSCQCCGSKTIDNLGDYEICPICKWEDDPIQSKEPDYVGGANKMSLNEAKEAYKQGRKVI >Mature_63_residues SDEYSCQCCGSKTIDNLGDYEICPICKWEDDPIQSKEPDYVGGANKMSLNEAKEAYKQGRKVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7197; Mature: 7066
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 10.9 %Cys+Met (Translated Protein) 7.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 9.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDEYSCQCCGSKTIDNLGDYEICPICKWEDDPIQSKEPDYVGGANKMSLNEAKEAYKQG CCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC RKVI CCCC >Mature Secondary Structure SDEYSCQCCGSKTIDNLGDYEICPICKWEDDPIQSKEPDYVGGANKMSLNEAKEAYKQG CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC RKVI CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA