Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108813230

Identifier: 108813230

GI number: 108813230

Start: 3453611

End: 3455806

Strand: Reverse

Name: 108813230

Synonym: YPN_3070

Alternate gene names: NA

Gene position: 3455806-3453611 (Counterclockwise)

Preceding gene: 108813231

Following gene: 108813229

Centisome position: 76.21

GC content: 46.04

Gene sequence:

>2196_bases
ATGAAAATAAACAGTAAGTTATGGATGGGCCTCCTAATGGGCATGCTAGGTATGGCGGTACCTCCATCACAGGCTTCTTC
TGATAATACTGGCTGTGTGTGGGGAAAATATTGCCCGCTCAGTGGTGTACCCTTTTTGGATGTTTACAATGATACTCGGG
TTAATATGATGTTATTGGTTGGAGAACCAAAAAATTTCATATTGCCACGTTTAACGATGCCAGCGGATATTACCCGTAGT
AGGAATTACCATTTTGGTGAGTTTTATTATGATGAAATGAGTTTTCCGAAGCGGGAAAAAAGTCTTACAGATGAGAATAA
TGATAGCCCTTCGGAAGAAACGCCATTTGATAAGATGGCAAAGACGCTAGGCATCAATTCGGCTTCGTTTAAGGGAACCA
ATGCCCGATATAGAGAAGCACGGCATATCTCCAATAATCCCGCATCAGTTGAGCAATTTTTTACCGCTTTACTGGCAGAC
TCGTCCTTAACTGCCGACGATCGACATAATTTAGCCCTCTGGCGATCCAATATTTTTCATAATGTCGATGCACCGGTCGA
TGGTGGAATTACACCGCCACCTTTTAACATTGTGCCAGGCTCACATGTTGATGCTTTTAGCGATTATCTTCATGGCGCCA
ATGCATTTTATCGGGGCGATTACCCAGAGGCCACCGCTTTATTTTCTGCCCTCCAAAAGAGTTCTCAAGCATGGGTCGCA
GAAACAGCGACTTATATGTTGTTCCGAGTTGCGCTCAATGAGAGCAGTACAAATGCGTCGGATAAATATGGCATGTTTGA
AACTAAAAATATCAATCAGGATGCCGCCCGTCAGGCATTGGATTATTCTCGGGCCTATTTAGTTGCTTATCCCCAAGGCA
TTTACGCAGAGTCGATTCAGGGGTTGGAGCGCCGTATTTACTGGTACCTCTCTGATTGGCAACAACTGGCGCGGCTGTAT
GAAGAGACATTACTGGCAGCACCGAATGCTGAAGCTTTGTGGGATACCGTATCAGAAGTTGATGCTAAATTTATCAGCAA
AGATGCCTTTGGTGGCGAGCCCTTTATCAGCGATATGCAAGCACCTTTACTGACCTTCACGCAAACATTACGTTGGTTGC
GATTAGGGGGGCGCCAGAGTGGCTCTGAGTTGGAGGTTACGCAGGAGAAACTGGCAAGTTATAAACCGATGTTTGTCGAT
GCGGATAGGCTCCCCCTTTGGCAGTATCTACAGACGGCCTGGCTCTATTATCATGAGCAAGATTATGCCGGTGTCGTCGC
CACTGTCTCGGCTGTCGACTCTCTGCCAGCCACTGACATTGTGACCTTCAGTCAACAGATTCTATATGGTGATGCATTGG
TGGCTCAACAACAATGGTCACAGGCCGAAGCACATTGGCGCAAGCTGCTGGGCCTGGTGCAATCGCCGCAACAACAGCAA
TATCTGCAACTCAAACTCGCCGCGGTTCTGGTGAACAGTGATCAAATTGAAGCCATATTTACCGCAGATAGCCCAATCAA
AAACCTGCGTTATCGTTCTCTGATACTCAAAACAAAAGCTCAAAAAGCACTTTTACAACAGCAAGTTATTTCTGGTGCTA
ATGATGAGGAAAAAACCATTGCTCTGCACACGCTATTACTGCGGGATCTTATGCTTGGTGATTATCAGGGTTATGAGCAG
GATAAACAGTTAAGCCCTCATATTCAGCAATCCGTCGATCAAAAAAGCTTTGCCGATGTAGACCTGGCGGCGTTCGATTG
GCAGGGCGATAATGTGGAGCAGGGCTATGCCTGTGCTGCGTTAGATGGGACGGTAAAAGCATTGGTTAAAAATAAAACGG
ATGGTCATGCCCTCAACTGCTTGGGAGAATTCTTCCGTGTAACTGACATCAATATCAATACTTATCAGGAAGGGGAGGGC
AATGAGGTGCTGAATGTCGCAGTCCATGCACATGAAACAGTGATAACTCAGCCCAATCGTTTCGATTATTATCAACACGT
TATCAACGACCCGAAGGCGGAGCCAGAAGATAAAAGCTATGCGCTTTACCGGGCTGTTATGTGCTATGCCCCATCGGGCT
ATAATCAATGTGGGGGTGAGGATGTCGATATTGCAACACGTAAGCGTTGGTTTAGCTCATTGAAAACTCAGTATAAAGGT
AGCCGATGGGCAGAACGGCTCAACTATTACTGGTAA

Upstream 100 bases:

>100_bases
AGCAGTATCCGATATTCATCTTGGATTTCAGTGCTTTCTTGTTCTTTTTGCTGAAAATATAAGCGACAATGTCGGATTTC
CTGAAGGGTGCCAAGCGAGA

Downstream 100 bases:

>100_bases
GCTGCCTATTAGCGCTATTTATGCCGCCCGCGATGGCAGAGGTTAGCGACAAACTGCAGTTGAGCCATAAGGTGTATGCC
CATGATTATCAGGCGTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 731; Mature: 731

Protein sequence:

>731_residues
MKINSKLWMGLLMGMLGMAVPPSQASSDNTGCVWGKYCPLSGVPFLDVYNDTRVNMMLLVGEPKNFILPRLTMPADITRS
RNYHFGEFYYDEMSFPKREKSLTDENNDSPSEETPFDKMAKTLGINSASFKGTNARYREARHISNNPASVEQFFTALLAD
SSLTADDRHNLALWRSNIFHNVDAPVDGGITPPPFNIVPGSHVDAFSDYLHGANAFYRGDYPEATALFSALQKSSQAWVA
ETATYMLFRVALNESSTNASDKYGMFETKNINQDAARQALDYSRAYLVAYPQGIYAESIQGLERRIYWYLSDWQQLARLY
EETLLAAPNAEALWDTVSEVDAKFISKDAFGGEPFISDMQAPLLTFTQTLRWLRLGGRQSGSELEVTQEKLASYKPMFVD
ADRLPLWQYLQTAWLYYHEQDYAGVVATVSAVDSLPATDIVTFSQQILYGDALVAQQQWSQAEAHWRKLLGLVQSPQQQQ
YLQLKLAAVLVNSDQIEAIFTADSPIKNLRYRSLILKTKAQKALLQQQVISGANDEEKTIALHTLLLRDLMLGDYQGYEQ
DKQLSPHIQQSVDQKSFADVDLAAFDWQGDNVEQGYACAALDGTVKALVKNKTDGHALNCLGEFFRVTDININTYQEGEG
NEVLNVAVHAHETVITQPNRFDYYQHVINDPKAEPEDKSYALYRAVMCYAPSGYNQCGGEDVDIATRKRWFSSLKTQYKG
SRWAERLNYYW

Sequences:

>Translated_731_residues
MKINSKLWMGLLMGMLGMAVPPSQASSDNTGCVWGKYCPLSGVPFLDVYNDTRVNMMLLVGEPKNFILPRLTMPADITRS
RNYHFGEFYYDEMSFPKREKSLTDENNDSPSEETPFDKMAKTLGINSASFKGTNARYREARHISNNPASVEQFFTALLAD
SSLTADDRHNLALWRSNIFHNVDAPVDGGITPPPFNIVPGSHVDAFSDYLHGANAFYRGDYPEATALFSALQKSSQAWVA
ETATYMLFRVALNESSTNASDKYGMFETKNINQDAARQALDYSRAYLVAYPQGIYAESIQGLERRIYWYLSDWQQLARLY
EETLLAAPNAEALWDTVSEVDAKFISKDAFGGEPFISDMQAPLLTFTQTLRWLRLGGRQSGSELEVTQEKLASYKPMFVD
ADRLPLWQYLQTAWLYYHEQDYAGVVATVSAVDSLPATDIVTFSQQILYGDALVAQQQWSQAEAHWRKLLGLVQSPQQQQ
YLQLKLAAVLVNSDQIEAIFTADSPIKNLRYRSLILKTKAQKALLQQQVISGANDEEKTIALHTLLLRDLMLGDYQGYEQ
DKQLSPHIQQSVDQKSFADVDLAAFDWQGDNVEQGYACAALDGTVKALVKNKTDGHALNCLGEFFRVTDININTYQEGEG
NEVLNVAVHAHETVITQPNRFDYYQHVINDPKAEPEDKSYALYRAVMCYAPSGYNQCGGEDVDIATRKRWFSSLKTQYKG
SRWAERLNYYW
>Mature_731_residues
MKINSKLWMGLLMGMLGMAVPPSQASSDNTGCVWGKYCPLSGVPFLDVYNDTRVNMMLLVGEPKNFILPRLTMPADITRS
RNYHFGEFYYDEMSFPKREKSLTDENNDSPSEETPFDKMAKTLGINSASFKGTNARYREARHISNNPASVEQFFTALLAD
SSLTADDRHNLALWRSNIFHNVDAPVDGGITPPPFNIVPGSHVDAFSDYLHGANAFYRGDYPEATALFSALQKSSQAWVA
ETATYMLFRVALNESSTNASDKYGMFETKNINQDAARQALDYSRAYLVAYPQGIYAESIQGLERRIYWYLSDWQQLARLY
EETLLAAPNAEALWDTVSEVDAKFISKDAFGGEPFISDMQAPLLTFTQTLRWLRLGGRQSGSELEVTQEKLASYKPMFVD
ADRLPLWQYLQTAWLYYHEQDYAGVVATVSAVDSLPATDIVTFSQQILYGDALVAQQQWSQAEAHWRKLLGLVQSPQQQQ
YLQLKLAAVLVNSDQIEAIFTADSPIKNLRYRSLILKTKAQKALLQQQVISGANDEEKTIALHTLLLRDLMLGDYQGYEQ
DKQLSPHIQQSVDQKSFADVDLAAFDWQGDNVEQGYACAALDGTVKALVKNKTDGHALNCLGEFFRVTDININTYQEGEG
NEVLNVAVHAHETVITQPNRFDYYQHVINDPKAEPEDKSYALYRAVMCYAPSGYNQCGGEDVDIATRKRWFSSLKTQYKG
SRWAERLNYYW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82558; Mature: 82558

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINSKLWMGLLMGMLGMAVPPSQASSDNTGCVWGKYCPLSGVPFLDVYNDTRVNMMLLV
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCEEEEEEE
GEPKNFILPRLTMPADITRSRNYHFGEFYYDEMSFPKREKSLTDENNDSPSEETPFDKMA
ECCCCCCCCCCCCCCHHHCCCCCCCCEEEECCCCCCCHHHCCCCCCCCCCCCCCCHHHHH
KTLGINSASFKGTNARYREARHISNNPASVEQFFTALLADSSLTADDRHNLALWRSNIFH
HHHCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHC
NVDAPVDGGITPPPFNIVPGSHVDAFSDYLHGANAFYRGDYPEATALFSALQKSSQAWVA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHCCCHHHH
ETATYMLFRVALNESSTNASDKYGMFETKNINQDAARQALDYSRAYLVAYPQGIYAESIQ
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCHHHHHHH
GLERRIYWYLSDWQQLARLYEETLLAAPNAEALWDTVSEVDAKFISKDAFGGEPFISDMQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
APLLTFTQTLRWLRLGGRQSGSELEVTQEKLASYKPMFVDADRLPLWQYLQTAWLYYHEQ
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHEECC
DYAGVVATVSAVDSLPATDIVTFSQQILYGDALVAQQQWSQAEAHWRKLLGLVQSPQQQQ
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
YLQLKLAAVLVNSDQIEAIFTADSPIKNLRYRSLILKTKAQKALLQQQVISGANDEEKTI
HHHHHHHHHEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
ALHTLLLRDLMLGDYQGYEQDKQLSPHIQQSVDQKSFADVDLAAFDWQGDNVEQGYACAA
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCHHHCCCCEEEEEECCCCCCCCCEEEEE
LDGTVKALVKNKTDGHALNCLGEFFRVTDININTYQEGEGNEVLNVAVHAHETVITQPNR
HHHHHHHHHHCCCCCHHHHHHHHHHEEEEECEECCCCCCCCCEEEEEEEECCEEEECCCH
FDYYQHVINDPKAEPEDKSYALYRAVMCYAPSGYNQCGGEDVDIATRKRWFSSLKTQYKG
HHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
SRWAERLNYYW
HHHHHHHCCCC
>Mature Secondary Structure
MKINSKLWMGLLMGMLGMAVPPSQASSDNTGCVWGKYCPLSGVPFLDVYNDTRVNMMLLV
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCEEEEEEE
GEPKNFILPRLTMPADITRSRNYHFGEFYYDEMSFPKREKSLTDENNDSPSEETPFDKMA
ECCCCCCCCCCCCCCHHHCCCCCCCCEEEECCCCCCCHHHCCCCCCCCCCCCCCCHHHHH
KTLGINSASFKGTNARYREARHISNNPASVEQFFTALLADSSLTADDRHNLALWRSNIFH
HHHCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHC
NVDAPVDGGITPPPFNIVPGSHVDAFSDYLHGANAFYRGDYPEATALFSALQKSSQAWVA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHCCCHHHH
ETATYMLFRVALNESSTNASDKYGMFETKNINQDAARQALDYSRAYLVAYPQGIYAESIQ
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCHHHHHHH
GLERRIYWYLSDWQQLARLYEETLLAAPNAEALWDTVSEVDAKFISKDAFGGEPFISDMQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
APLLTFTQTLRWLRLGGRQSGSELEVTQEKLASYKPMFVDADRLPLWQYLQTAWLYYHEQ
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHEECC
DYAGVVATVSAVDSLPATDIVTFSQQILYGDALVAQQQWSQAEAHWRKLLGLVQSPQQQQ
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
YLQLKLAAVLVNSDQIEAIFTADSPIKNLRYRSLILKTKAQKALLQQQVISGANDEEKTI
HHHHHHHHHEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
ALHTLLLRDLMLGDYQGYEQDKQLSPHIQQSVDQKSFADVDLAAFDWQGDNVEQGYACAA
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCHHHCCCCEEEEEECCCCCCCCCEEEEE
LDGTVKALVKNKTDGHALNCLGEFFRVTDININTYQEGEGNEVLNVAVHAHETVITQPNR
HHHHHHHHHHCCCCCHHHHHHHHHHEEEEECEECCCCCCCCCEEEEEEEECCEEEECCCH
FDYYQHVINDPKAEPEDKSYALYRAVMCYAPSGYNQCGGEDVDIATRKRWFSSLKTQYKG
HHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
SRWAERLNYYW
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA