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The map label for this gene is yqcC [C]

Identifier: 108813125

GI number: 108813125

Start: 3326026

End: 3326358

Strand: Reverse

Name: yqcC [C]

Synonym: YPN_2965

Alternate gene names: 108813125

Gene position: 3326358-3326026 (Counterclockwise)

Preceding gene: 108813126

Following gene: 108813124

Centisome position: 73.36

GC content: 48.65

Gene sequence:

>333_bases
ATGAGTACAGAAAATAAGGTGCGTCAAAGCTTACAGGATATTGAGTTTGCCATGCGAGAGACTGACCTCTGGCAAACCGT
CCCACCGGAAGCAGAAGCTTTTGAGAGTAACGAGCCTTTTAGTATTGATACTATGGCGGCAGAGCAGTGGCTACAGTGGG
TGTTTCTCCCCCGGATGTATGCATTGCTGGAGCTAAATGGCCCGTTCCCCACCCGTTTTGCTATTACGCCGTATTTTGAA
GAGGCTCTGAGCGGTGATGGGCGGCCAGATTACTCGGCGCTTTTGGCACAATTACGGTGCCTTGATGATCTGTTGAATAA
AGAAAGTGAATAA

Upstream 100 bases:

>100_bases
TGCTGATGGCGTTAATTTGGGCATATTCTCCCTTCAATGGTATGCTTGCCCACCGTTGAAGGTGCCGGTAAGTGGCAATT
TTTGGGTTGAGAGCATAATC

Downstream 100 bases:

>100_bases
TGCTGGAAATTATCTATCAAGATGAACACATTGTTGCGGTGAATAAGCCTGCCGGTTGGTTAGTGCATCGTAGTTGGTTG
GACCGCAATGAAACGGTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MSTENKVRQSLQDIEFAMRETDLWQTVPPEAEAFESNEPFSIDTMAAEQWLQWVFLPRMYALLELNGPFPTRFAITPYFE
EALSGDGRPDYSALLAQLRCLDDLLNKESE

Sequences:

>Translated_110_residues
MSTENKVRQSLQDIEFAMRETDLWQTVPPEAEAFESNEPFSIDTMAAEQWLQWVFLPRMYALLELNGPFPTRFAITPYFE
EALSGDGRPDYSALLAQLRCLDDLLNKESE
>Mature_109_residues
STENKVRQSLQDIEFAMRETDLWQTVPPEAEAFESNEPFSIDTMAAEQWLQWVFLPRMYALLELNGPFPTRFAITPYFEE
ALSGDGRPDYSALLAQLRCLDDLLNKESE

Specific function: Unknown

COG id: COG3098

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yqcC [H]

Homologues:

Organism=Escherichia coli, GI1789156, Length=109, Percent_Identity=41.2844036697248, Blast_Score=83, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007384 [H]

Pfam domain/function: PF04287 DUF446 [H]

EC number: NA

Molecular weight: Translated: 12723; Mature: 12592

Theoretical pI: Translated: 3.88; Mature: 3.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTENKVRQSLQDIEFAMRETDLWQTVPPEAEAFESNEPFSIDTMAAEQWLQWVFLPRMY
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
ALLELNGPFPTRFAITPYFEEALSGDGRPDYSALLAQLRCLDDLLNKESE
HHHHCCCCCCCCEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
STENKVRQSLQDIEFAMRETDLWQTVPPEAEAFESNEPFSIDTMAAEQWLQWVFLPRMY
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
ALLELNGPFPTRFAITPYFEEALSGDGRPDYSALLAQLRCLDDLLNKESE
HHHHCCCCCCCCEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]