Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108812964

Identifier: 108812964

GI number: 108812964

Start: 3160700

End: 3161629

Strand: Reverse

Name: 108812964

Synonym: YPN_2804

Alternate gene names: NA

Gene position: 3161629-3160700 (Counterclockwise)

Preceding gene: 108812965

Following gene: 108812963

Centisome position: 69.72

GC content: 34.3

Gene sequence:

>930_bases
ATGCCACAAGTTAATAACATATCGACAAACAATATACACTCAGCCGGCTTTAACAACTCAAATTCAATTCAAAAATATAC
TGGAGCAGTCTCATCTATAAGTGATGATTTACGTATTAATAATGAAAAGTGCAAGAGTGACATAGGAACTATAAGTGGTG
ATATAAAAATTAATCGCCATTCTGCAGTCTACGGTAATGTGAATTCAGTCAGTGGCGATATTACTGTAAAAAATTCTATA
GTAGATAAAGACATCACCACAGTAAGTGGTGATGTTAACGCGGTGAATTCGACTATAGGAAAAAATATAAAAACAGTCAG
TGGTTCGATTGAGGTGGAACAATCAACTGTAAGCGGCAATTTGGAAACAACAAGTGGTGGGATAGATATAGATACAACAA
AAATTAACGGTAATGTGCATACGACAAGTGGTTCAATTTCGATGAACGATTCAACTATTGATGGTAGCGTAACATGTAAG
GCGGGGTCTGTAACAATTGTCAATTCAACAATTAAAGAAAGCCTTAATGTAACCAGTGAGAAAATAATTGTTGGTACAGC
ATCTTGTATTGGAAAAATTAACATTTCCCCCCCTGAATCTGTAAATTTTAACATCATGAATTTTGGGAACGATAGTATAG
TGATGGGAATGAGGAATTTTTGTATTTCAGGAGAGGTAAATTTTACCATTACTAATGGTAAAGTATTTGTTAATGAACAA
AGGGTCGGCCATACAGCTTCGCAATCAACTTCGAAAAAAGTAGAAGAAGTTACTATTAATATCGCGAAAAATGCCAGTGT
TAATGATATTGTTTTTTATACTAAAAAGTGCCATATCATTTTAGAAGGAAATGCTAAATATAACGGAGAAAAAAAGGATG
GCATGCAATTCACCCATGTTAACGCACCGAAAAGTCATGCTTATGCGTAA

Upstream 100 bases:

>100_bases
GTTTTAATGTATTATTGTTAATACTGATTGAGAATATTATCTAATCAGAAATAAACGAATAAAAAACTGTTTACTCATCA
TTAATATAAGGATTTTTTGT

Downstream 100 bases:

>100_bases
AATACGTATTTAGACTATCTCTTTGGCAATGTCCATTTTCATAAATGGGCATTGCCCATGGGTATTTTACCACACGACTT
TAATAGCCGATTTTCAGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MPQVNNISTNNIHSAGFNNSNSIQKYTGAVSSISDDLRINNEKCKSDIGTISGDIKINRHSAVYGNVNSVSGDITVKNSI
VDKDITTVSGDVNAVNSTIGKNIKTVSGSIEVEQSTVSGNLETTSGGIDIDTTKINGNVHTTSGSISMNDSTIDGSVTCK
AGSVTIVNSTIKESLNVTSEKIIVGTASCIGKINISPPESVNFNIMNFGNDSIVMGMRNFCISGEVNFTITNGKVFVNEQ
RVGHTASQSTSKKVEEVTINIAKNASVNDIVFYTKKCHIILEGNAKYNGEKKDGMQFTHVNAPKSHAYA

Sequences:

>Translated_309_residues
MPQVNNISTNNIHSAGFNNSNSIQKYTGAVSSISDDLRINNEKCKSDIGTISGDIKINRHSAVYGNVNSVSGDITVKNSI
VDKDITTVSGDVNAVNSTIGKNIKTVSGSIEVEQSTVSGNLETTSGGIDIDTTKINGNVHTTSGSISMNDSTIDGSVTCK
AGSVTIVNSTIKESLNVTSEKIIVGTASCIGKINISPPESVNFNIMNFGNDSIVMGMRNFCISGEVNFTITNGKVFVNEQ
RVGHTASQSTSKKVEEVTINIAKNASVNDIVFYTKKCHIILEGNAKYNGEKKDGMQFTHVNAPKSHAYA
>Mature_308_residues
PQVNNISTNNIHSAGFNNSNSIQKYTGAVSSISDDLRINNEKCKSDIGTISGDIKINRHSAVYGNVNSVSGDITVKNSIV
DKDITTVSGDVNAVNSTIGKNIKTVSGSIEVEQSTVSGNLETTSGGIDIDTTKINGNVHTTSGSISMNDSTIDGSVTCKA
GSVTIVNSTIKESLNVTSEKIIVGTASCIGKINISPPESVNFNIMNFGNDSIVMGMRNFCISGEVNFTITNGKVFVNEQR
VGHTASQSTSKKVEEVTINIAKNASVNDIVFYTKKCHIILEGNAKYNGEKKDGMQFTHVNAPKSHAYA

Specific function: Unknown

COG id: COG3595

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32766; Mature: 32635

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQVNNISTNNIHSAGFNNSNSIQKYTGAVSSISDDLRINNEKCKSDIGTISGDIKINRH
CCCCCCCCCCCEEECCCCCCCCHHHHHCHHHHCCCCEEECCHHHHHHHCCEECEEEEEEC
SAVYGNVNSVSGDITVKNSIVDKDITTVSGDVNAVNSTIGKNIKTVSGSIEVEQSTVSGN
EEEECCCCCCCCCEEEECCCCCCCCEEECCCCHHHHHHHCCCEEEEECEEEEEEEEECCC
LETTSGGIDIDTTKINGNVHTTSGSISMNDSTIDGSVTCKAGSVTIVNSTIKESLNVTSE
EEECCCCEEEEEEEECCEEEECCCEEEECCCCCCCEEEEECCCEEEEEHHHHHHCCCCCC
KIIVGTASCIGKINISPPESVNFNIMNFGNDSIVMGMRNFCISGEVNFTITNGKVFVNEQ
EEEEEEHHHEEEEECCCCCCCEEEEEEECCCEEEEEEHHEEECCEEEEEEECCEEEEECC
RVGHTASQSTSKKVEEVTINIAKNASVNDIVFYTKKCHIILEGNAKYNGEKKDGMQFTHV
CCCCCCCCHHHCEEEEEEEEEECCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCEEEEEE
NAPKSHAYA
CCCCCCCCC
>Mature Secondary Structure 
PQVNNISTNNIHSAGFNNSNSIQKYTGAVSSISDDLRINNEKCKSDIGTISGDIKINRH
CCCCCCCCCCEEECCCCCCCCHHHHHCHHHHCCCCEEECCHHHHHHHCCEECEEEEEEC
SAVYGNVNSVSGDITVKNSIVDKDITTVSGDVNAVNSTIGKNIKTVSGSIEVEQSTVSGN
EEEECCCCCCCCCEEEECCCCCCCCEEECCCCHHHHHHHCCCEEEEECEEEEEEEEECCC
LETTSGGIDIDTTKINGNVHTTSGSISMNDSTIDGSVTCKAGSVTIVNSTIKESLNVTSE
EEECCCCEEEEEEEECCEEEECCCEEEECCCCCCCEEEEECCCEEEEEHHHHHHCCCCCC
KIIVGTASCIGKINISPPESVNFNIMNFGNDSIVMGMRNFCISGEVNFTITNGKVFVNEQ
EEEEEEHHHEEEEECCCCCCCEEEEEEECCCEEEEEEHHEEECCEEEEEEECCEEEEECC
RVGHTASQSTSKKVEEVTINIAKNASVNDIVFYTKKCHIILEGNAKYNGEKKDGMQFTHV
CCCCCCCCHHHCEEEEEEEEEECCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCEEEEEE
NAPKSHAYA
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA