Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108812944

Identifier: 108812944

GI number: 108812944

Start: 3141453

End: 3142310

Strand: Reverse

Name: 108812944

Synonym: YPN_2784

Alternate gene names: NA

Gene position: 3142310-3141453 (Counterclockwise)

Preceding gene: 108812945

Following gene: 108812943

Centisome position: 69.3

GC content: 46.97

Gene sequence:

>858_bases
GTGACTAGTTTGCCAATAACTGCTAAGCAATTCAAACCCTCCATTGCTGAGGAGCCTAAGATTGCCAGGCTAAAACAGCT
TGATCGGCATAGTTTGGAACAATTAATCCGTGGTGACATCCTGGCAATTCGTATTCCCAATTACTGCCCTGAAAAAACCG
CTGCATCATTAAATCAATACATTAATCAAACCGCAAAGCTGGATGAATACACCCATGAGGTCTATGAAAAAGACCAGGTG
GTACAAAATTTTTACGGTGTCCACCGCTGGGGAACGCCATTCAATACGGCCTACGGTAAAGCTGAAAACGAGAGTGCAAA
GCAGAAGTATTATCGTGACGCAGCCCAGATGCGCATACTGATTGACCGTCTTTGCGCTCCAGATTTGCCGCCAATTCAAG
CGTTAATCGAAAATATTAAACAGCACTGGCCAGAGGGCGTAGTGACTGCCTCTTTTGAAGGGAAACCGATGTTTGCCGGT
ATCATTCGCGTGATGTTTCCTGAAACGGCGCATCTATCCGAAACGGTTCCACATGTGGATTGCCTGCCATTTTCCGTTGC
CGAGTTAGAGCATCAATTCAGCGCTAATATTTATATTGATACACCACCTGTTGGCGGTGAATTAGTCGTCTGGGATACTG
AGGCCTTTTCCTTCGCCGAAGTCGCGCTATTTGAGGGAGGAAAACTGCCCGAAGAGCGTTTGCAGCGGCCTCTGCGCATT
CAACCACAGAAAAATGAGCTGGTGATCATCAATACCCGCCGCCCTCACGCCATTTGCGGGTTTGATTCAGGCAAACGAAT
CAGCATGCAGTCATTTATAGGTTACAACACGAACCAGCCGTTCTATTTCTGGTGTTAA

Upstream 100 bases:

>100_bases
CTGCTCGTCAATAAGACAACATCTCATCATGTTATCCCTTAGCAGAATTATCGTATTATTTAAAATGATAGGGTTTCTAA
ATTAATGGAGCCAAATCATT

Downstream 100 bases:

>100_bases
TGACTTCAAAATGAGAGCTTTTTATGACTCCTGAAGAGTTTCGCCGCCATGGCTATGCCATGATCGACCTGATTGCTGAT
TACCGACAAAATATCGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MTSLPITAKQFKPSIAEEPKIARLKQLDRHSLEQLIRGDILAIRIPNYCPEKTAASLNQYINQTAKLDEYTHEVYEKDQV
VQNFYGVHRWGTPFNTAYGKAENESAKQKYYRDAAQMRILIDRLCAPDLPPIQALIENIKQHWPEGVVTASFEGKPMFAG
IIRVMFPETAHLSETVPHVDCLPFSVAELEHQFSANIYIDTPPVGGELVVWDTEAFSFAEVALFEGGKLPEERLQRPLRI
QPQKNELVIINTRRPHAICGFDSGKRISMQSFIGYNTNQPFYFWC

Sequences:

>Translated_285_residues
MTSLPITAKQFKPSIAEEPKIARLKQLDRHSLEQLIRGDILAIRIPNYCPEKTAASLNQYINQTAKLDEYTHEVYEKDQV
VQNFYGVHRWGTPFNTAYGKAENESAKQKYYRDAAQMRILIDRLCAPDLPPIQALIENIKQHWPEGVVTASFEGKPMFAG
IIRVMFPETAHLSETVPHVDCLPFSVAELEHQFSANIYIDTPPVGGELVVWDTEAFSFAEVALFEGGKLPEERLQRPLRI
QPQKNELVIINTRRPHAICGFDSGKRISMQSFIGYNTNQPFYFWC
>Mature_284_residues
TSLPITAKQFKPSIAEEPKIARLKQLDRHSLEQLIRGDILAIRIPNYCPEKTAASLNQYINQTAKLDEYTHEVYEKDQVV
QNFYGVHRWGTPFNTAYGKAENESAKQKYYRDAAQMRILIDRLCAPDLPPIQALIENIKQHWPEGVVTASFEGKPMFAGI
IRVMFPETAHLSETVPHVDCLPFSVAELEHQFSANIYIDTPPVGGELVVWDTEAFSFAEVALFEGGKLPEERLQRPLRIQ
PQKNELVIINTRRPHAICGFDSGKRISMQSFIGYNTNQPFYFWC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32570; Mature: 32438

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLPITAKQFKPSIAEEPKIARLKQLDRHSLEQLIRGDILAIRIPNYCPEKTAASLNQY
CCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHH
INQTAKLDEYTHEVYEKDQVVQNFYGVHRWGTPFNTAYGKAENESAKQKYYRDAAQMRIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
IDRLCAPDLPPIQALIENIKQHWPEGVVTASFEGKPMFAGIIRVMFPETAHLSETVPHVD
HHHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHCCCCCC
CLPFSVAELEHQFSANIYIDTPPVGGELVVWDTEAFSFAEVALFEGGKLPEERLQRPLRI
CCCHHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCCHHHHHHHCCCCCCHHHHCCCEEC
QPQKNELVIINTRRPHAICGFDSGKRISMQSFIGYNTNQPFYFWC
CCCCCCEEEEECCCCCEEECCCCCCEEEHHHHHCCCCCCCEEEEC
>Mature Secondary Structure 
TSLPITAKQFKPSIAEEPKIARLKQLDRHSLEQLIRGDILAIRIPNYCPEKTAASLNQY
CCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHH
INQTAKLDEYTHEVYEKDQVVQNFYGVHRWGTPFNTAYGKAENESAKQKYYRDAAQMRIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
IDRLCAPDLPPIQALIENIKQHWPEGVVTASFEGKPMFAGIIRVMFPETAHLSETVPHVD
HHHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHCCCCCC
CLPFSVAELEHQFSANIYIDTPPVGGELVVWDTEAFSFAEVALFEGGKLPEERLQRPLRI
CCCHHHHHHHHHHCCEEEEECCCCCCEEEEEECCCCCHHHHHHHCCCCCCHHHHCCCEEC
QPQKNELVIINTRRPHAICGFDSGKRISMQSFIGYNTNQPFYFWC
CCCCCCEEEEECCCCCEEECCCCCCEEEHHHHHCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA