| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is 108812799
Identifier: 108812799
GI number: 108812799
Start: 2974680
End: 2975477
Strand: Reverse
Name: 108812799
Synonym: YPN_2638
Alternate gene names: NA
Gene position: 2975477-2974680 (Counterclockwise)
Preceding gene: 108812800
Following gene: 108812798
Centisome position: 65.62
GC content: 49.87
Gene sequence:
>798_bases ATGTATACGTTGATGAAAGCCGATGTGCTGGCTCAACTCGCGGGGCTGCAGCAAGAAATCAGCCAGTTACACGATAATGC CCAGCAAAATCAGTCTCATTTTGTGTTGTTAGAGCGCCGTTTTAGTCGCTTGCAGTCTTTTAATGACGAGCCACAGCTAC AAGATTACCGGTTGCAGTTGGAGCACGATGATGCGGTGGTAAAACAAATTGCCCAATTGCGGCAGGTCGCCAATGCGGCA CTGTGTGACTATGAAAAACATCAGGTATGCGCCTTGTGTAGCCCATCCTCCAAGACTGACGACTACCTGACAAGTTTTAA CCAATCGCTGCAACAAGAGATCAAACTCGCCGGTATGCAGATGGGTGAGAAGGTGTTGTTGGTGGGCAGCGGTGCCTTGC CGACCACGGCGCTGGTACTGGTTGCCAAGCTCGGTGCAACCGTCTTTTGCTACGATCACGATCCCGCCGCACAGCAGTTA GCTCGCCAGCTCGTTCAATCCCTCGGTCTGGAAAAACAGGTGCAATTTATTGATAACCTGAAAGAGTTAACGGACCGTCC CGTTGACCACATTATCGTCGCTTCATTGGTGGCGGATAAACAGGCGTTATTAGCACAATTGGTTCCCTATGTGACCCGGT CCAGCAAATTAGTGATGCGCTATGGCAATGGGCTGAAGTCTATTTTCAACTGCCCTTATTGCCATGAGGTGAACTGTTCA CATTGGCGCACCGCCAGTAAACCGGTGACCACCGGGCTTTATGACCTTATCATTTTGGAACCTAATCATCATGCATAA
Upstream 100 bases:
>100_bases TGTCCACCGTATTTGGTGTGGGTATCGAAAGTGGAACAAGCCCTTTGGGCTATCGCTACTTATTGCCCACTCAGTTCTTA CCTACTCATGGAGAGAAAAT
Downstream 100 bases:
>100_bases CACCCTGCCGACCTTGATTCTGGGGGCCGGGCCTGCGGCTATCCAACTTGCGGTGGATATTAGTGCTACAGGTGATGCTA GGTTGGGGCTCTATAATCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MYTLMKADVLAQLAGLQQEISQLHDNAQQNQSHFVLLERRFSRLQSFNDEPQLQDYRLQLEHDDAVVKQIAQLRQVANAA LCDYEKHQVCALCSPSSKTDDYLTSFNQSLQQEIKLAGMQMGEKVLLVGSGALPTTALVLVAKLGATVFCYDHDPAAQQL ARQLVQSLGLEKQVQFIDNLKELTDRPVDHIIVASLVADKQALLAQLVPYVTRSSKLVMRYGNGLKSIFNCPYCHEVNCS HWRTASKPVTTGLYDLIILEPNHHA
Sequences:
>Translated_265_residues MYTLMKADVLAQLAGLQQEISQLHDNAQQNQSHFVLLERRFSRLQSFNDEPQLQDYRLQLEHDDAVVKQIAQLRQVANAA LCDYEKHQVCALCSPSSKTDDYLTSFNQSLQQEIKLAGMQMGEKVLLVGSGALPTTALVLVAKLGATVFCYDHDPAAQQL ARQLVQSLGLEKQVQFIDNLKELTDRPVDHIIVASLVADKQALLAQLVPYVTRSSKLVMRYGNGLKSIFNCPYCHEVNCS HWRTASKPVTTGLYDLIILEPNHHA >Mature_265_residues MYTLMKADVLAQLAGLQQEISQLHDNAQQNQSHFVLLERRFSRLQSFNDEPQLQDYRLQLEHDDAVVKQIAQLRQVANAA LCDYEKHQVCALCSPSSKTDDYLTSFNQSLQQEIKLAGMQMGEKVLLVGSGALPTTALVLVAKLGATVFCYDHDPAAQQL ARQLVQSLGLEKQVQFIDNLKELTDRPVDHIIVASLVADKQALLAQLVPYVTRSSKLVMRYGNGLKSIFNCPYCHEVNCS HWRTASKPVTTGLYDLIILEPNHHA
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29686; Mature: 29686
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYTLMKADVLAQLAGLQQEISQLHDNAQQNQSHFVLLERRFSRLQSFNDEPQLQDYRLQL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHEEE EHDDAVVKQIAQLRQVANAALCDYEKHQVCALCSPSSKTDDYLTSFNQSLQQEIKLAGMQ CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH MGEKVLLVGSGALPTTALVLVAKLGATVFCYDHDPAAQQLARQLVQSLGLEKQVQFIDNL CCCEEEEEECCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHH KELTDRPVDHIIVASLVADKQALLAQLVPYVTRSSKLVMRYGNGLKSIFNCPYCHEVNCS HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHCCCCCCCCCCH HWRTASKPVTTGLYDLIILEPNHHA HCCCCCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure MYTLMKADVLAQLAGLQQEISQLHDNAQQNQSHFVLLERRFSRLQSFNDEPQLQDYRLQL CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHEEE EHDDAVVKQIAQLRQVANAALCDYEKHQVCALCSPSSKTDDYLTSFNQSLQQEIKLAGMQ CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH MGEKVLLVGSGALPTTALVLVAKLGATVFCYDHDPAAQQLARQLVQSLGLEKQVQFIDNL CCCEEEEEECCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHH KELTDRPVDHIIVASLVADKQALLAQLVPYVTRSSKLVMRYGNGLKSIFNCPYCHEVNCS HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHCCCCCCCCCCH HWRTASKPVTTGLYDLIILEPNHHA HCCCCCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA