Click here to switch to the map view.

The map label for this gene is ycaI [H]

Identifier: 108812744

GI number: 108812744

Start: 2906675

End: 2908966

Strand: Reverse

Name: ycaI [H]

Synonym: YPN_2583

Alternate gene names: 108812744

Gene position: 2908966-2906675 (Counterclockwise)

Preceding gene: 108812745

Following gene: 108812743

Centisome position: 64.15

GC content: 47.16

Gene sequence:

>2292_bases
ATGGTTTTTATCGCGTTATCAACAGATCGGGTCGCCGCTGCTGTCATTGTCGGGATCTTGCCTCTTATTTTTCTGCATCA
ACTACCAGGGCCCACTATCATTGGTTCTCTATTAGCCCTAAGTGCATTTTTGTGGTTAAGCCGCAATCGTTACTGCCAAT
TTTTAGCGCTGATTGTGATTAGCTTCCTGTGGGGGGTTTGGCATAGCAATGGGATACTGATGCAAACAGAAGCATTAACC
CAGGGGGATCAGCAGATAGTTGCGACAATAAACAGTTCATCTCTTTCATGGGATGACGGCCAGAAAGTTGTGATAAGTAT
TCAGAAAATTAATGAAAAACGGGTTTTCCCTCCAATAGCAGTCAACGTTAAGTGGCCAGAACGGTTGGATCAATACTGTG
CAGGGCAACGCTGGGCGTTTAGGTTACGTATGAGGGCAGTACATAGCGTACTGAATGAGGGCGGGTTTGACAGTCAGCGC
TGGGCTATTGCTAACAGACGTCCACTACAAGGGCGCATCATTGAGGCTAAATTACTGGATGCAGAGTGTAATTTTCGTCA
GCAAATTATCAGTAGCATAGAGCAGCAACTGGTGGGATATGATCAGCGGCGGATCATGCTAGCACTGGCCTTTGGTGAAA
GATCACAACTGAACAAAGAAGAGTGGTCACTCTTACGCTACACCGGCACTGCGCACCTGATGGCGATTTCCGGTTTACAT
ATTGCACTGGCGGCCTTATTTGGTGGGATGCTTGCCCGATTAGTACAGCTCCTTTTTCCTGTCAGTTGGATTGGGCCTTT
GCTACCGCTACTGATTGGCTGGCTGATTGCTATGATTTATGTCTGGCTGGCAGGAGCAAACTCACCAGCAATCCGGGCGG
CCATTGCGTTAACGCTGTGGCTGCTGCTACGTTTGTTCGGTATTTTATGTAGCCCATGGCAGGTGTGGAGGTGGGCTTTG
GGGCTAATTTTAGTCAGCGACCCGCTAGCCGTATTATCAGACAGCTTTTGGCTCTCCTGCCTGGCGGTATTTAGCCTGAT
ATGTTGGTTTCACTTGTCCCCTGTTTCTTCTCGTTTCATTACTGGTTGGTATGGCTTGGTTATCCGTTGGTTTCATTTGC
AGTTTGGTATGATGCTACTGCTGATGCCGTTACAGATAGGGTTATTCCACGGTATAAGTTTATTTTCTATACCCGCCAAT
CTGTGGGCGGTCCCAATAGTCTCATTGTTCACCGTACCCTGCGTATTATTAGCATTGGCTTTAGCATTGCTCCCTGCTGT
TGCTGATATATTTTGGTTCTTGGCTGATATCTCGTTGACTGTGGTGCTATTCCCGCTCAATCAGCTAAAAGAAGGCTGGT
TACACACTGGCATGGCTTCTGTTGCGATCGGTTATGGTGGTTGGCTGGCATTATTTATCTGGCGCTTTCAATGGTGGCGC
AGTCATCCTCTTGGTGTCATTGTGCTGTGTATGAACATGGTATTACTGACTCAACGGCGTGATGAGTATCACTGGCGTGT
GGATATGCTGGATATCGGGCATGGTCTGGCTGTGGTGATTGAGCGTGAGGGGAAAGCCATTATCTATGACACTGGCAATC
ATTGGCCTACAGGTAATATGGCCGCTATTGTCGTTTTACCGCTCCTTAAATGGCGTGGCATTACTGTTGAACAGATTATC
CTTAGCCATGACCATCAGGACCATACTGGCGGTTTGGCTGTACTCTTGGATGCTTTTCCGCAGGCAACGGTACGTGCGCC
TTTCTCTGTAAAAAACGTAGCCAATACTCTGCCTTGTAAACAGGGGGAGAGATGGCAGTGGCAAGGTTTAGATTTTGACG
TGTTATGGCCGAAAGAACAGGTGGTTAATGCTCAGAATAATGACTCATGTGTCATTCGCATTAATGATGGTAAACATAGT
GTATTGTTGACCGGGGATCTTGAGTCCCAAGGAGAACGGCAGTTGGTGAGCGATATCCGGGGAGAATTAACATCAACGGT
GCTGCAAGTGCCCCATCACGGCAGTAATACTTCTTCAACCGCGCCTTTTCTACGGGCAGTTAGCCCAGAATTGGCCCTCG
CTTCTGTTGCTCGTTATAACCAATGGCGACTACCTGCGAAAAAAGTGATCAATCGCTATCAAAAAAATGGCATTATTTGG
CGTGATACATCAGTATCAGGGCAATTAAGTGTATATTTTCACTGCGATACTTGGTTCGTTAAAGGCTATCGGGAACAATT
AAAACCACGTTGGTATCACCAGCGGTTTGGCGTTAGAGGTCATAATGAGTAG

Upstream 100 bases:

>100_bases
TCTTTGGCCCCAATGTTGAGAATCAACCTATTCCAAATGGCGTAAACAGCCAGACGACAGAGATGAATAGCAATGAGGCT
ATTCAAGAGTAAAAACAGGG

Downstream 100 bases:

>100_bases
AATGGGCCGCTATTTCTTATGGTGTTGGTATTTGCATGATGAATGATAAAGATCTATCCACTTGGCAGACCTTTCGTCGC
CTATGGCCGACGATCTCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 763; Mature: 763

Protein sequence:

>763_residues
MVFIALSTDRVAAAVIVGILPLIFLHQLPGPTIIGSLLALSAFLWLSRNRYCQFLALIVISFLWGVWHSNGILMQTEALT
QGDQQIVATINSSSLSWDDGQKVVISIQKINEKRVFPPIAVNVKWPERLDQYCAGQRWAFRLRMRAVHSVLNEGGFDSQR
WAIANRRPLQGRIIEAKLLDAECNFRQQIISSIEQQLVGYDQRRIMLALAFGERSQLNKEEWSLLRYTGTAHLMAISGLH
IALAALFGGMLARLVQLLFPVSWIGPLLPLLIGWLIAMIYVWLAGANSPAIRAAIALTLWLLLRLFGILCSPWQVWRWAL
GLILVSDPLAVLSDSFWLSCLAVFSLICWFHLSPVSSRFITGWYGLVIRWFHLQFGMMLLLMPLQIGLFHGISLFSIPAN
LWAVPIVSLFTVPCVLLALALALLPAVADIFWFLADISLTVVLFPLNQLKEGWLHTGMASVAIGYGGWLALFIWRFQWWR
SHPLGVIVLCMNMVLLTQRRDEYHWRVDMLDIGHGLAVVIEREGKAIIYDTGNHWPTGNMAAIVVLPLLKWRGITVEQII
LSHDHQDHTGGLAVLLDAFPQATVRAPFSVKNVANTLPCKQGERWQWQGLDFDVLWPKEQVVNAQNNDSCVIRINDGKHS
VLLTGDLESQGERQLVSDIRGELTSTVLQVPHHGSNTSSTAPFLRAVSPELALASVARYNQWRLPAKKVINRYQKNGIIW
RDTSVSGQLSVYFHCDTWFVKGYREQLKPRWYHQRFGVRGHNE

Sequences:

>Translated_763_residues
MVFIALSTDRVAAAVIVGILPLIFLHQLPGPTIIGSLLALSAFLWLSRNRYCQFLALIVISFLWGVWHSNGILMQTEALT
QGDQQIVATINSSSLSWDDGQKVVISIQKINEKRVFPPIAVNVKWPERLDQYCAGQRWAFRLRMRAVHSVLNEGGFDSQR
WAIANRRPLQGRIIEAKLLDAECNFRQQIISSIEQQLVGYDQRRIMLALAFGERSQLNKEEWSLLRYTGTAHLMAISGLH
IALAALFGGMLARLVQLLFPVSWIGPLLPLLIGWLIAMIYVWLAGANSPAIRAAIALTLWLLLRLFGILCSPWQVWRWAL
GLILVSDPLAVLSDSFWLSCLAVFSLICWFHLSPVSSRFITGWYGLVIRWFHLQFGMMLLLMPLQIGLFHGISLFSIPAN
LWAVPIVSLFTVPCVLLALALALLPAVADIFWFLADISLTVVLFPLNQLKEGWLHTGMASVAIGYGGWLALFIWRFQWWR
SHPLGVIVLCMNMVLLTQRRDEYHWRVDMLDIGHGLAVVIEREGKAIIYDTGNHWPTGNMAAIVVLPLLKWRGITVEQII
LSHDHQDHTGGLAVLLDAFPQATVRAPFSVKNVANTLPCKQGERWQWQGLDFDVLWPKEQVVNAQNNDSCVIRINDGKHS
VLLTGDLESQGERQLVSDIRGELTSTVLQVPHHGSNTSSTAPFLRAVSPELALASVARYNQWRLPAKKVINRYQKNGIIW
RDTSVSGQLSVYFHCDTWFVKGYREQLKPRWYHQRFGVRGHNE
>Mature_763_residues
MVFIALSTDRVAAAVIVGILPLIFLHQLPGPTIIGSLLALSAFLWLSRNRYCQFLALIVISFLWGVWHSNGILMQTEALT
QGDQQIVATINSSSLSWDDGQKVVISIQKINEKRVFPPIAVNVKWPERLDQYCAGQRWAFRLRMRAVHSVLNEGGFDSQR
WAIANRRPLQGRIIEAKLLDAECNFRQQIISSIEQQLVGYDQRRIMLALAFGERSQLNKEEWSLLRYTGTAHLMAISGLH
IALAALFGGMLARLVQLLFPVSWIGPLLPLLIGWLIAMIYVWLAGANSPAIRAAIALTLWLLLRLFGILCSPWQVWRWAL
GLILVSDPLAVLSDSFWLSCLAVFSLICWFHLSPVSSRFITGWYGLVIRWFHLQFGMMLLLMPLQIGLFHGISLFSIPAN
LWAVPIVSLFTVPCVLLALALALLPAVADIFWFLADISLTVVLFPLNQLKEGWLHTGMASVAIGYGGWLALFIWRFQWWR
SHPLGVIVLCMNMVLLTQRRDEYHWRVDMLDIGHGLAVVIEREGKAIIYDTGNHWPTGNMAAIVVLPLLKWRGITVEQII
LSHDHQDHTGGLAVLLDAFPQATVRAPFSVKNVANTLPCKQGERWQWQGLDFDVLWPKEQVVNAQNNDSCVIRINDGKHS
VLLTGDLESQGERQLVSDIRGELTSTVLQVPHHGSNTSSTAPFLRAVSPELALASVARYNQWRLPAKKVINRYQKNGIIW
RDTSVSGQLSVYFHCDTWFVKGYREQLKPRWYHQRFGVRGHNE

Specific function: Unknown

COG id: COG0658

COG function: function code R; Predicted membrane metal-binding protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ComEC, N.gonorrhoeae ComA, and H.influenzae Rec2 [H]

Homologues:

Organism=Escherichia coli, GI87081801, Length=764, Percent_Identity=41.3612565445026, Blast_Score=554, Evalue=1e-159,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR004477
- InterPro:   IPR004797 [H]

Pfam domain/function: PF03772 Competence; PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 86243; Mature: 86243

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFIALSTDRVAAAVIVGILPLIFLHQLPGPTIIGSLLALSAFLWLSRNRYCQFLALIVI
CEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
SFLWGVWHSNGILMQTEALTQGDQQIVATINSSSLSWDDGQKVVISIQKINEKRVFPPIA
HHHHHHHCCCCEEEEEHHHCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCEE
VNVKWPERLDQYCAGQRWAFRLRMRAVHSVLNEGGFDSQRWAIANRRPLQGRIIEAKLLD
EEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCEEEEEEEEC
AECNFRQQIISSIEQQLVGYDQRRIMLALAFGERSQLNKEEWSLLRYTGTAHLMAISGLH
CCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHCCHHHHHEEEECCCCHHHHHHHHH
IALAALFGGMLARLVQLLFPVSWIGPLLPLLIGWLIAMIYVWLAGANSPAIRAAIALTLW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LLLRLFGILCSPWQVWRWALGLILVSDPLAVLSDSFWLSCLAVFSLICWFHLSPVSSRFI
HHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
TGWYGLVIRWFHLQFGMMLLLMPLQIGLFHGISLFSIPANLWAVPIVSLFTVPCVLLALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCHHHHHHHHHHHHHHHHHHHHHH
LALLPAVADIFWFLADISLTVVLFPLNQLKEGWLHTGMASVAIGYGGWLALFIWRFQWWR
HHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHH
SHPLGVIVLCMNMVLLTQRRDEYHWRVDMLDIGHGLAVVIEREGKAIIYDTGNHWPTGNM
CCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEECCCEEEEECCCCCCCCCH
AAIVVLPLLKWRGITVEQIILSHDHQDHTGGLAVLLDAFPQATVRAPFSVKNVANTLPCK
HHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHCCCCC
QGERWQWQGLDFDVLWPKEQVVNAQNNDSCVIRINDGKHSVLLTGDLESQGERQLVSDIR
CCCCEEECCCCEEEECCHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHH
GELTSTVLQVPHHGSNTSSTAPFLRAVSPELALASVARYNQWRLPAKKVINRYQKNGIIW
HHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEE
RDTSVSGQLSVYFHCDTWFVKGYREQLKPRWYHQRFGVRGHNE
EECCCCCEEEEEEEECHHHHHHHHHHCCCHHHHHHCCCCCCCC
>Mature Secondary Structure
MVFIALSTDRVAAAVIVGILPLIFLHQLPGPTIIGSLLALSAFLWLSRNRYCQFLALIVI
CEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
SFLWGVWHSNGILMQTEALTQGDQQIVATINSSSLSWDDGQKVVISIQKINEKRVFPPIA
HHHHHHHCCCCEEEEEHHHCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCEE
VNVKWPERLDQYCAGQRWAFRLRMRAVHSVLNEGGFDSQRWAIANRRPLQGRIIEAKLLD
EEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCEEEEEEEEC
AECNFRQQIISSIEQQLVGYDQRRIMLALAFGERSQLNKEEWSLLRYTGTAHLMAISGLH
CCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHCCHHHHHEEEECCCCHHHHHHHHH
IALAALFGGMLARLVQLLFPVSWIGPLLPLLIGWLIAMIYVWLAGANSPAIRAAIALTLW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LLLRLFGILCSPWQVWRWALGLILVSDPLAVLSDSFWLSCLAVFSLICWFHLSPVSSRFI
HHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
TGWYGLVIRWFHLQFGMMLLLMPLQIGLFHGISLFSIPANLWAVPIVSLFTVPCVLLALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCHHHHHHHHHHHHHHHHHHHHHH
LALLPAVADIFWFLADISLTVVLFPLNQLKEGWLHTGMASVAIGYGGWLALFIWRFQWWR
HHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHH
SHPLGVIVLCMNMVLLTQRRDEYHWRVDMLDIGHGLAVVIEREGKAIIYDTGNHWPTGNM
CCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEEECCCEEEEECCCCCCCCCH
AAIVVLPLLKWRGITVEQIILSHDHQDHTGGLAVLLDAFPQATVRAPFSVKNVANTLPCK
HHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHCCCCC
QGERWQWQGLDFDVLWPKEQVVNAQNNDSCVIRINDGKHSVLLTGDLESQGERQLVSDIR
CCCCEEECCCCEEEECCHHHHCCCCCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHH
GELTSTVLQVPHHGSNTSSTAPFLRAVSPELALASVARYNQWRLPAKKVINRYQKNGIIW
HHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEE
RDTSVSGQLSVYFHCDTWFVKGYREQLKPRWYHQRFGVRGHNE
EECCCCCEEEEEEEECHHHHHHHHHHCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 8094880 [H]