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The map label for this gene is 108812692

Identifier: 108812692

GI number: 108812692

Start: 2843233

End: 2843520

Strand: Reverse

Name: 108812692

Synonym: YPN_2531

Alternate gene names: NA

Gene position: 2843520-2843233 (Counterclockwise)

Preceding gene: 108812694

Following gene: 108812691

Centisome position: 62.71

GC content: 48.26

Gene sequence:

>288_bases
ATGGACGAAACCTACATCAAAATTAAAGACCAGTGGGAATATCTGTACCGCGCAGTGGACACTGCAGGCCAGACCATCGA
TTTCCTGTTGACTGCCAAACGGGATGCAGCAGCGGCGTTGCGCTTCTTTCGTAAGGCCATTCGACACCAAAGTGAACCGG
AGGTCGTGACTATCGATAAGAGTGGTGCTAATACAGCGGCGCTGGTCACGCTCAACGCAGATAAAGCAGAAGATGAAGCG
ATTACCATCAAGCAAATCAGTATTGACAAACAAAATGAAGCAAGATAG

Upstream 100 bases:

>100_bases
ACCATTCTACACTGCACCGCACCGCTGGGTTATACGTCTGGTTCCGCTGCTGGATAAAGCCTTTCGTCGACATAAGTGCA
CCGTGGTGCGCCGATGGAGA

Downstream 100 bases:

>100_bases
TTTTACATGCAATAATAAATAGCAGTTATATATATTTTTAATATCATTTATTTTTTATTTACAAAATATGGTGAGCATAG
GGAATGATTTTAATATCCTA

Product: transposase

Products: NA

Alternate protein names: Integrase Catalytic Region; Transposase And Inactivated Derivatives-Like Protein; Insertion Sequence Transposase-Like Protein; Integrase Core Domain Protein; Integrase; ISYps1 Transposase; ISSod8 Transposase; Integrase Catalytic Subunit; Transposase For Insertion Sequence IS; Insertion Element; IS26 Transposase

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MDETYIKIKDQWEYLYRAVDTAGQTIDFLLTAKRDAAAALRFFRKAIRHQSEPEVVTIDKSGANTAALVTLNADKAEDEA
ITIKQISIDKQNEAR

Sequences:

>Translated_95_residues
MDETYIKIKDQWEYLYRAVDTAGQTIDFLLTAKRDAAAALRFFRKAIRHQSEPEVVTIDKSGANTAALVTLNADKAEDEA
ITIKQISIDKQNEAR
>Mature_95_residues
MDETYIKIKDQWEYLYRAVDTAGQTIDFLLTAKRDAAAALRFFRKAIRHQSEPEVVTIDKSGANTAALVTLNADKAEDEA
ITIKQISIDKQNEAR

Specific function: Unknown

COG id: COG3316

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10730; Mature: 10730

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDETYIKIKDQWEYLYRAVDTAGQTIDFLLTAKRDAAAALRFFRKAIRHQSEPEVVTIDK
CCCCEEEEEHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEC
SGANTAALVTLNADKAEDEAITIKQISIDKQNEAR
CCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCC
>Mature Secondary Structure
MDETYIKIKDQWEYLYRAVDTAGQTIDFLLTAKRDAAAALRFFRKAIRHQSEPEVVTIDK
CCCCEEEEEHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEC
SGANTAALVTLNADKAEDEAITIKQISIDKQNEAR
CCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA