| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
Click here to switch to the map view.
The map label for this gene is 108812691
Identifier: 108812691
GI number: 108812691
Start: 2842507
End: 2842869
Strand: Reverse
Name: 108812691
Synonym: YPN_2530
Alternate gene names: NA
Gene position: 2842869-2842507 (Counterclockwise)
Preceding gene: 108812692
Following gene: 108812690
Centisome position: 62.69
GC content: 33.88
Gene sequence:
>363_bases GTGTTTATGAAAAATCAATGGCAACATCAATATTTTTTATCCTATTCTGAGTTAGTTGCAAACTTTCCGTCCCCAGAAAA AGTAGTAAGTGATTATATTAAACATAAGTTTAGTACAACACTTCCATGGTTTGGCTGGGCAGACCCTGACAACCTTTATT TTATCCGATTTACTCAAAGCCGTAGTAACAATAAATCTTATACCGGATGGGATCATCTTGGTAAGTATGCCATTGAAACG TTAACCCTCACACAAGCAGCAATAGTTAATATTGGAAGTCGTTTTGATATCTTTGACGAAGCTAATTCAAGTGCTGGAAT ATATAAAAAAAACAATGCTGATTTTTTTGACGAAACAAACTAA
Upstream 100 bases:
>100_bases TATTCTGTAGAAATAATGTGAAAATGTGTTTTTTGTAAGTTCTATTAAACACATCAGTTTACAGCAATGAATTCACCATT GTGCATCGTCAATAAAAGGA
Downstream 100 bases:
>100_bases GCAAAAATGCTTCCTTCCGAATACTTATATTTTTTGAGAGATTGTGATTTTTCTAATCTCTACAATAAAGCGCTATCAGA TTACTGGGCTGAGAATTACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MFMKNQWQHQYFLSYSELVANFPSPEKVVSDYIKHKFSTTLPWFGWADPDNLYFIRFTQSRSNNKSYTGWDHLGKYAIET LTLTQAAIVNIGSRFDIFDEANSSAGIYKKNNADFFDETN
Sequences:
>Translated_120_residues MFMKNQWQHQYFLSYSELVANFPSPEKVVSDYIKHKFSTTLPWFGWADPDNLYFIRFTQSRSNNKSYTGWDHLGKYAIET LTLTQAAIVNIGSRFDIFDEANSSAGIYKKNNADFFDETN >Mature_120_residues MFMKNQWQHQYFLSYSELVANFPSPEKVVSDYIKHKFSTTLPWFGWADPDNLYFIRFTQSRSNNKSYTGWDHLGKYAIET LTLTQAAIVNIGSRFDIFDEANSSAGIYKKNNADFFDETN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14030; Mature: 14030
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMKNQWQHQYFLSYSELVANFPSPEKVVSDYIKHKFSTTLPWFGWADPDNLYFIRFTQS CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECC RSNNKSYTGWDHLGKYAIETLTLTQAAIVNIGSRFDIFDEANSSAGIYKKNNADFFDETN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCC >Mature Secondary Structure MFMKNQWQHQYFLSYSELVANFPSPEKVVSDYIKHKFSTTLPWFGWADPDNLYFIRFTQS CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECC RSNNKSYTGWDHLGKYAIETLTLTQAAIVNIGSRFDIFDEANSSAGIYKKNNADFFDETN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA