| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is 108812665
Identifier: 108812665
GI number: 108812665
Start: 2812050
End: 2812310
Strand: Reverse
Name: 108812665
Synonym: YPN_2504
Alternate gene names: NA
Gene position: 2812310-2812050 (Counterclockwise)
Preceding gene: 108812666
Following gene: 108812664
Centisome position: 62.02
GC content: 47.51
Gene sequence:
>261_bases ATGGAGTTACTCGCCAACGAGGTGATCACCATTACCAGCACCGAGGATGAGATAAAAATCACCGCCAAGAAGAAGATAAC GCTAAATGCAGGCGGCAGTTATATCACGCTGGATGAGAATCGGATCGAGTCAGGAACGGCGGGGGAATATTTGACTAAGG CAGGGCATTACGGGCGAGTGGATAAGGCGAAATTGGAGACAGTAGTGCCAACATTAGCCGTTAAAGCTAAACCACCCACT CAGAAGTATCCATTTTCTTAA
Upstream 100 bases:
>100_bases GCAAAAATAAAACAGACCCTCTCAACAAGACTGTCATTTAAATTAGAAAAATAAAGAAATTGACAAAAATCGTCATAAAC TTATTAACTTCCGGCTCCGG
Downstream 100 bases:
>100_bases TTAAAGGATTAATCAATGATAATCAGCCCTCCTTTCTTGCGCGCAAAAATGTCGTCACAACCCGATGAAGAATGGGTAAG CAGCATGATGCCGGCAGATC
Product: hypothetical protein
Products: NA
Alternate protein names: VGR-Related Protein
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MELLANEVITITSTEDEIKITAKKKITLNAGGSYITLDENRIESGTAGEYLTKAGHYGRVDKAKLETVVPTLAVKAKPPT QKYPFS
Sequences:
>Translated_86_residues MELLANEVITITSTEDEIKITAKKKITLNAGGSYITLDENRIESGTAGEYLTKAGHYGRVDKAKLETVVPTLAVKAKPPT QKYPFS >Mature_86_residues MELLANEVITITSTEDEIKITAKKKITLNAGGSYITLDENRIESGTAGEYLTKAGHYGRVDKAKLETVVPTLAVKAKPPT QKYPFS
Specific function: Unknown
COG id: COG4253
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9369; Mature: 9369
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELLANEVITITSTEDEIKITAKKKITLNAGGSYITLDENRIESGTAGEYLTKAGHYGRV CCCCCCCEEEEECCCCEEEEEEEEEEEEECCCCEEEEECCCCCCCCCCCHHHCCCCCCCC DKAKLETVVPTLAVKAKPPTQKYPFS CCHHHHEECCEEEEECCCCCCCCCCC >Mature Secondary Structure MELLANEVITITSTEDEIKITAKKKITLNAGGSYITLDENRIESGTAGEYLTKAGHYGRV CCCCCCCEEEEECCCCEEEEEEEEEEEEECCCCEEEEECCCCCCCCCCCHHHCCCCCCCC DKAKLETVVPTLAVKAKPPTQKYPFS CCHHHHEECCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA