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The map label for this gene is ybiT [H]

Identifier: 108812648

GI number: 108812648

Start: 2790655

End: 2792418

Strand: Reverse

Name: ybiT [H]

Synonym: YPN_2487

Alternate gene names: 108812648

Gene position: 2792418-2790655 (Counterclockwise)

Preceding gene: 108812650

Following gene: 108812647

Centisome position: 61.58

GC content: 47.28

Gene sequence:

>1764_bases
ATGTCTGCTTGTCACACCCGTCTTCACCTACTTTTCTGCCACTCTGCTGAGATTTCGTGCAAAACTGGAGGCGATACTCT
CGCCATCTTGTGGCATAATGCGCGCCGAATCACATTTTTTATTCTTCTTGAATATCCCTATTCAGTCATCAAATCGAGAG
CGAGCTCTGTGCTAAGTACTAACAATATCACCATGCAATTCGGCAGCAAGCCGCTGTTTGAAAACATTTCAGTCAAATTC
GGTGGCGGTAACCGCTATGGCCTGATCGGCGCTAATGGTTGTGGTAAATCCACATTCATGAAGATTCTGGGGGGCGATCT
GGTCCCTAGCGGCGGTAACGTCTTCCTTGACCCGAATGAGCGTCTGGGTAAACTTCGTCAGGATCAATTCGCCTTTGAAA
ACAATACAGTGCTGGATACCGTTATTATGGGACACGGCGAACTGTGGGAAGTAAAAGAAGAGCGTGACCGCATTTATGCC
ATGGCTGAAATGAGCGAAGAAGATGGCTATAAAGTTGCTGATCTGGAAGTTGCCTACGGTGAAATGGATGGCTACAGCGC
AGAAGCCCGTGCTGGTGAGTTGTTGCTGGGCGTGGGTATTCCCGTTGAACAGCATTATGGCTTGATGAGCGAAATCGCAC
CCGGTTGGAAGTTACGTGTATTGCTGGCGCAAGCCCTGTTCTCCGATCCAGAAATTTTGTTACTTGATGAGCCAACCAAC
AACCTGGATATCGATACTATCCGTTGGTTAGAGCAGGTGCTAAACGAACGTAACAGCACCATGATTATTATTTCCCATGA
CCGTCACTTCCTTAACATGGTGTGTACGCATATGGCGGATCTGGATTACGGCGAACTGCGCGTTTATCCAGGTAACTATG
ATGAGTATATGACCGCAGCGACTCAAGCTCGCGAGCGTTTGTTGTCAGATAATGCGAAGAAAAAAGCCCAAATATCTGAA
CTGCAATCTTTCGTTAGCCGCTTTAGCGCCAACGCCTCTAAATCTAAGCAGGCAACTTCACGTGCTCGCCAGATTGATAA
AATTCAGCTTGATGAGGTAAAAGCCTCCAGCCGCCAGAACCCGTTTATTCGCTTCGATCAGGATAGAAAACTGTTCCGTA
ATGCGCTGGAAGTTGAGATGTTGACCAAAGGTTTTGATAACGGTCCGCTGTTTAAAAATCTGACTCTCCGCCTGGAAGTG
GGTGAGAAAGTGGCTATCCTCGGGCCGAACGGTATTGGTAAGTCTACTTTGCTGAAAACCCTGCTAGGGGAGTATGAATC
TGATGCTGGGACCGTAAAATGGTCTGAAAACAGTAAGATTGGTTACTACGCACAGGATCACGCCAGTGATTTTGACATCG
ATCTGACGGTGTTTGACTGGATGAGCCAGTGGAAGCAAGAGAAAGACGATGAGCAGGCGGTTCGCAGTGTGCTGGGGCGT
TTGTTGTTTAGCCAGGATGACATCAAGAAAAAAGTTAGCGTGCTGTCTGGTGGTGAGAAAGGGCGGATGTTGTTTGGTAA
GTTGATGATGCAGCGCCCTAACATTTTAGTCATGGATGAACCAACCAACCACTTGGATATGGAGTCCATTGAATCTCTCA
ATATGGCATTGGAAATGTACGAAGGGACATTAATCTTCGTCTCCCATGACCGCGAGTTTGTGAGTTCACTGGCAACCCGC
GTGATTGAAATGACGCCGAATAAGCTTATCGACTTTACCGGTAACTACGAAGATTATCTGAGTAGCCAAGGGATTCACTC
ATAA

Upstream 100 bases:

>100_bases
TACTCCATTGTCGTTTTCCTGCAACTCGAATTATTTGGGATCTTGGGATATATAGGTAAAACGTCGTGTCTGCGAGCTTT
GATGGCACGATTTTTCTGTC

Downstream 100 bases:

>100_bases
TTATTTGATTGACCTAACAAAAAAAGCTGATGCTATGCGTCAGCTTTTTTTATGTCTTCACGTTAAGTAATAATAAATAA
TATAAAATACGGACAATAAT

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 587; Mature: 586

Protein sequence:

>587_residues
MSACHTRLHLLFCHSAEISCKTGGDTLAILWHNARRITFFILLEYPYSVIKSRASSVLSTNNITMQFGSKPLFENISVKF
GGGNRYGLIGANGCGKSTFMKILGGDLVPSGGNVFLDPNERLGKLRQDQFAFENNTVLDTVIMGHGELWEVKEERDRIYA
MAEMSEEDGYKVADLEVAYGEMDGYSAEARAGELLLGVGIPVEQHYGLMSEIAPGWKLRVLLAQALFSDPEILLLDEPTN
NLDIDTIRWLEQVLNERNSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEYMTAATQARERLLSDNAKKKAQISE
LQSFVSRFSANASKSKQATSRARQIDKIQLDEVKASSRQNPFIRFDQDRKLFRNALEVEMLTKGFDNGPLFKNLTLRLEV
GEKVAILGPNGIGKSTLLKTLLGEYESDAGTVKWSENSKIGYYAQDHASDFDIDLTVFDWMSQWKQEKDDEQAVRSVLGR
LLFSQDDIKKKVSVLSGGEKGRMLFGKLMMQRPNILVMDEPTNHLDMESIESLNMALEMYEGTLIFVSHDREFVSSLATR
VIEMTPNKLIDFTGNYEDYLSSQGIHS

Sequences:

>Translated_587_residues
MSACHTRLHLLFCHSAEISCKTGGDTLAILWHNARRITFFILLEYPYSVIKSRASSVLSTNNITMQFGSKPLFENISVKF
GGGNRYGLIGANGCGKSTFMKILGGDLVPSGGNVFLDPNERLGKLRQDQFAFENNTVLDTVIMGHGELWEVKEERDRIYA
MAEMSEEDGYKVADLEVAYGEMDGYSAEARAGELLLGVGIPVEQHYGLMSEIAPGWKLRVLLAQALFSDPEILLLDEPTN
NLDIDTIRWLEQVLNERNSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEYMTAATQARERLLSDNAKKKAQISE
LQSFVSRFSANASKSKQATSRARQIDKIQLDEVKASSRQNPFIRFDQDRKLFRNALEVEMLTKGFDNGPLFKNLTLRLEV
GEKVAILGPNGIGKSTLLKTLLGEYESDAGTVKWSENSKIGYYAQDHASDFDIDLTVFDWMSQWKQEKDDEQAVRSVLGR
LLFSQDDIKKKVSVLSGGEKGRMLFGKLMMQRPNILVMDEPTNHLDMESIESLNMALEMYEGTLIFVSHDREFVSSLATR
VIEMTPNKLIDFTGNYEDYLSSQGIHS
>Mature_586_residues
SACHTRLHLLFCHSAEISCKTGGDTLAILWHNARRITFFILLEYPYSVIKSRASSVLSTNNITMQFGSKPLFENISVKFG
GGNRYGLIGANGCGKSTFMKILGGDLVPSGGNVFLDPNERLGKLRQDQFAFENNTVLDTVIMGHGELWEVKEERDRIYAM
AEMSEEDGYKVADLEVAYGEMDGYSAEARAGELLLGVGIPVEQHYGLMSEIAPGWKLRVLLAQALFSDPEILLLDEPTNN
LDIDTIRWLEQVLNERNSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEYMTAATQARERLLSDNAKKKAQISEL
QSFVSRFSANASKSKQATSRARQIDKIQLDEVKASSRQNPFIRFDQDRKLFRNALEVEMLTKGFDNGPLFKNLTLRLEVG
EKVAILGPNGIGKSTLLKTLLGEYESDAGTVKWSENSKIGYYAQDHASDFDIDLTVFDWMSQWKQEKDDEQAVRSVLGRL
LFSQDDIKKKVSVLSGGEKGRMLFGKLMMQRPNILVMDEPTNHLDMESIESLNMALEMYEGTLIFVSHDREFVSSLATRV
IEMTPNKLIDFTGNYEDYLSSQGIHS

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=502, Percent_Identity=31.8725099601594, Blast_Score=257, Evalue=2e-68,
Organism=Homo sapiens, GI10947137, Length=534, Percent_Identity=30.8988764044944, Blast_Score=247, Evalue=2e-65,
Organism=Homo sapiens, GI27881506, Length=534, Percent_Identity=30.8988764044944, Blast_Score=247, Evalue=2e-65,
Organism=Homo sapiens, GI10947135, Length=542, Percent_Identity=29.520295202952, Blast_Score=212, Evalue=6e-55,
Organism=Homo sapiens, GI69354671, Length=542, Percent_Identity=29.520295202952, Blast_Score=212, Evalue=7e-55,
Organism=Escherichia coli, GI1787041, Length=530, Percent_Identity=86.7924528301887, Blast_Score=970, Evalue=0.0,
Organism=Escherichia coli, GI1789751, Length=523, Percent_Identity=32.5047801147228, Blast_Score=285, Evalue=7e-78,
Organism=Escherichia coli, GI1787182, Length=539, Percent_Identity=32.2820037105751, Blast_Score=250, Evalue=2e-67,
Organism=Escherichia coli, GI2367384, Length=518, Percent_Identity=29.7297297297297, Blast_Score=221, Evalue=1e-58,
Organism=Escherichia coli, GI1786975, Length=518, Percent_Identity=22.7799227799228, Blast_Score=99, Evalue=6e-22,
Organism=Escherichia coli, GI1788165, Length=209, Percent_Identity=30.622009569378, Blast_Score=86, Evalue=7e-18,
Organism=Escherichia coli, GI1788761, Length=212, Percent_Identity=26.8867924528302, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI87081791, Length=229, Percent_Identity=27.9475982532751, Blast_Score=80, Evalue=5e-16,
Organism=Escherichia coli, GI1786345, Length=259, Percent_Identity=27.7992277992278, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI87081709, Length=214, Percent_Identity=27.5700934579439, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI48994943, Length=241, Percent_Identity=29.8755186721992, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1787758, Length=204, Percent_Identity=25.4901960784314, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1786803, Length=220, Percent_Identity=28.1818181818182, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1789891, Length=206, Percent_Identity=26.2135922330097, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI87081834, Length=200, Percent_Identity=27, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1786698, Length=196, Percent_Identity=29.5918367346939, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI145693107, Length=560, Percent_Identity=23.0357142857143, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1790739, Length=228, Percent_Identity=23.2456140350877, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1789672, Length=219, Percent_Identity=25.1141552511416, Blast_Score=64, Evalue=4e-11,
Organism=Escherichia coli, GI48995001, Length=218, Percent_Identity=27.0642201834862, Blast_Score=63, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=542, Percent_Identity=29.520295202952, Blast_Score=247, Evalue=1e-65,
Organism=Caenorhabditis elegans, GI17553372, Length=532, Percent_Identity=29.5112781954887, Blast_Score=232, Evalue=4e-61,
Organism=Caenorhabditis elegans, GI17559834, Length=547, Percent_Identity=27.7879341864717, Blast_Score=221, Evalue=1e-57,
Organism=Saccharomyces cerevisiae, GI6320874, Length=514, Percent_Identity=31.3229571984436, Blast_Score=259, Evalue=7e-70,
Organism=Saccharomyces cerevisiae, GI6321121, Length=534, Percent_Identity=30.8988764044944, Blast_Score=243, Evalue=7e-65,
Organism=Saccharomyces cerevisiae, GI6325030, Length=392, Percent_Identity=27.8061224489796, Blast_Score=124, Evalue=4e-29,
Organism=Saccharomyces cerevisiae, GI6323278, Length=412, Percent_Identity=24.7572815533981, Blast_Score=118, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6324314, Length=251, Percent_Identity=27.8884462151394, Blast_Score=95, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24666836, Length=509, Percent_Identity=31.434184675835, Blast_Score=259, Evalue=5e-69,
Organism=Drosophila melanogaster, GI24642252, Length=536, Percent_Identity=30.2238805970149, Blast_Score=258, Evalue=1e-68,
Organism=Drosophila melanogaster, GI18859989, Length=536, Percent_Identity=30.2238805970149, Blast_Score=258, Evalue=1e-68,
Organism=Drosophila melanogaster, GI24641342, Length=540, Percent_Identity=30, Blast_Score=236, Evalue=3e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 66176; Mature: 66045

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSACHTRLHLLFCHSAEISCKTGGDTLAILWHNARRITFFILLEYPYSVIKSRASSVLST
CCCHHCEEEEEEEECCCEEEECCCCEEEEEEECCCEEEEEEEEECCHHHHHHHHHHHEEC
NNITMQFGSKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLVPSGGNVFLDPNE
CCEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEECCHH
RLGKLRQDQFAFENNTVLDTVIMGHGELWEVKEERDRIYAMAEMSEEDGYKVADLEVAYG
HHHHHHHHHHHCCCCCEEEEEEECCCCEEECHHHHHHEEEEEECCCCCCCEEEEEEEEEC
EMDGYSAEARAGELLLGVGIPVEQHYGLMSEIAPGWKLRVLLAQALFSDPEILLLDEPTN
CCCCCCCCCCCCCEEEEECCCHHHHCCHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCC
NLDIDTIRWLEQVLNERNSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEYMTAA
CCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHH
TQARERLLSDNAKKKAQISELQSFVSRFSANASKSKQATSRARQIDKIQLDEVKASSRQN
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEHHHHHHCCCCC
PFIRFDQDRKLFRNALEVEMLTKGFDNGPLFKNLTLRLEVGEKVAILGPNGIGKSTLLKT
CCEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCEEEEECCCCCCHHHHHHH
LLGEYESDAGTVKWSENSKIGYYAQDHASDFDIDLTVFDWMSQWKQEKDDEQAVRSVLGR
HHHHCCCCCCEEEECCCCCEEEEECCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHH
LLFSQDDIKKKVSVLSGGEKGRMLFGKLMMQRPNILVMDEPTNHLDMESIESLNMALEMY
HHCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHEEE
EGTLIFVSHDREFVSSLATRVIEMTPNKLIDFTGNYEDYLSSQGIHS
CCEEEEEECCHHHHHHHHHHHHHCCCCCEEECCCCHHHHHCCCCCCC
>Mature Secondary Structure 
SACHTRLHLLFCHSAEISCKTGGDTLAILWHNARRITFFILLEYPYSVIKSRASSVLST
CCHHCEEEEEEEECCCEEEECCCCEEEEEEECCCEEEEEEEEECCHHHHHHHHHHHEEC
NNITMQFGSKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLVPSGGNVFLDPNE
CCEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEECCHH
RLGKLRQDQFAFENNTVLDTVIMGHGELWEVKEERDRIYAMAEMSEEDGYKVADLEVAYG
HHHHHHHHHHHCCCCCEEEEEEECCCCEEECHHHHHHEEEEEECCCCCCCEEEEEEEEEC
EMDGYSAEARAGELLLGVGIPVEQHYGLMSEIAPGWKLRVLLAQALFSDPEILLLDEPTN
CCCCCCCCCCCCCEEEEECCCHHHHCCHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCC
NLDIDTIRWLEQVLNERNSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEYMTAA
CCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHH
TQARERLLSDNAKKKAQISELQSFVSRFSANASKSKQATSRARQIDKIQLDEVKASSRQN
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEHHHHHHCCCCC
PFIRFDQDRKLFRNALEVEMLTKGFDNGPLFKNLTLRLEVGEKVAILGPNGIGKSTLLKT
CCEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCEEEEECCCCCCHHHHHHH
LLGEYESDAGTVKWSENSKIGYYAQDHASDFDIDLTVFDWMSQWKQEKDDEQAVRSVLGR
HHHHCCCCCCEEEECCCCCEEEEECCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHH
LLFSQDDIKKKVSVLSGGEKGRMLFGKLMMQRPNILVMDEPTNHLDMESIESLNMALEMY
HHCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHEEE
EGTLIFVSHDREFVSSLATRVIEMTPNKLIDFTGNYEDYLSSQGIHS
CCEEEEEECCHHHHHHHHHHHHHCCCCCEEECCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]