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The map label for this gene is rhmT [H]

Identifier: 108812577

GI number: 108812577

Start: 2700429

End: 2701733

Strand: Reverse

Name: rhmT [H]

Synonym: YPN_2416

Alternate gene names: 108812577

Gene position: 2701733-2700429 (Counterclockwise)

Preceding gene: 108812580

Following gene: 108812575

Centisome position: 59.58

GC content: 48.89

Gene sequence:

>1305_bases
ATGTCGAACTTTAACCACTATCCAGACCCCACGCTTAACTCTGCTATCAAGAAAGCGTGGTACCGCCTAATGCCACTGAT
GTTTATCATGTATTTCGTTGCTTTTATTGACCGGATAAATGTCGGTTTTGCTAAAGATGCGATGTCTGCCGATATCGGGT
TGTCACAATCGGCTTTTGCCTTAGGGGCGGGTATTTTCTTTGCTGCTTATGCTCTCTTCGGTATCCCGGCAAATTTAATG
ATGAATAAGTTAGGCGCCAAGGTATGGTTGAGCTCAACAACGGTGGTCTGGGGGTTGCTGTCCGCCGGTACCGGTTTGGT
TAGCAACGAATACCAATTTGTTATCCTACGCTTTCTACTGGGTGTCGCTGAAGCGGGTTTCTATCCTGGCATACTCTTAC
TGGCGTCGATTTATTTCCCTAACAAGATCCGGGCCTCGGTCATTGGTATCTTCGTCCTTGGTGTCCCCGCGGCTCTTACA
CTGGGGTCGCCCATTTCTGGCGCATTATTGGATATGCAGGGCTTTCTAGGCCAACCGGGGTGGTTTTGGATGTTTCTGCT
GGAGGGGTTGCCCGCCGTGGGGTTAGGTATTTTTGCCTTTTTCTACCTTGATGATAGCCCCGCCACTGCTCGTTATCTTA
ATCCAGAAGAGAAACAGGCTCTTCTCACCCAACTCAGTATTGAACAAAGCGATACTGAGAGTAGCAGTGTAAAAGCGGTA
TTACTCAGCCCTAAAGTTTGGCATCTGGCGTTGATTTACGGGACGATCCAAGTTGGTGTGTATGGTTTGATATTTTTCTT
ACCCTCGCAGGTCGCCACTTTGCTTGGCTCTACGTTGGGATTCAAAGAATCACTGGTGGCCGCGATACCTTGGGCATTTT
CTGCGTTAGGTGTGTATTACATTCCGCGCTATGCCGATAGAAAAACCCATCGCCGTAACCCGATTGCGACGCTGAATTTG
GTTGTCGCGGCGATAGGGCTGATCATTTCAGCTTACGCCAGCCCTGTATTGGCTATTGCAGCCCTGTGTCTTTGCGCCAT
TGGCTTTTTAGCCGTGCAGCCTATTTTTTGGACATTCCCTGCACAGATTCTTTCAGGGAAAGCCTTAGCGGCGGGTATCG
GATTTTGCACGACTATGGGGGCATTTTTCAGTTTTCTGGCGCCGATAATCAGAGTTGAAGCCGAAAGCCAGTTCAACAGC
CCACCAGCCGGTCTGATAACACTTGCACTTTTCTCGCTGCTGTCTGCCACGTTAATCTTTTCGTTAAAGTTTTGGCCTGC
AAAGGCAACGGCTGAGGTTATCTAA

Upstream 100 bases:

>100_bases
GTGATTGACCCAGATTTCATTTTTTAATGCCCTTATTAGCCTGACCTTTAGTCCCTCTCGTCGTCATCCGTTAGTTATGT
CATTAACACGGAGGTCCAAT

Downstream 100 bases:

>100_bases
CCAGCGAATTATAAGAATCGCCGTTCATGATCCGCTTTTAACTTCCTGACGGCATCATAGCGGCCAAATAAACGGTAGCG
GTTAAGGGCAATGCCGTCAT

Product: transmembrane transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MSNFNHYPDPTLNSAIKKAWYRLMPLMFIMYFVAFIDRINVGFAKDAMSADIGLSQSAFALGAGIFFAAYALFGIPANLM
MNKLGAKVWLSSTTVVWGLLSAGTGLVSNEYQFVILRFLLGVAEAGFYPGILLLASIYFPNKIRASVIGIFVLGVPAALT
LGSPISGALLDMQGFLGQPGWFWMFLLEGLPAVGLGIFAFFYLDDSPATARYLNPEEKQALLTQLSIEQSDTESSSVKAV
LLSPKVWHLALIYGTIQVGVYGLIFFLPSQVATLLGSTLGFKESLVAAIPWAFSALGVYYIPRYADRKTHRRNPIATLNL
VVAAIGLIISAYASPVLAIAALCLCAIGFLAVQPIFWTFPAQILSGKALAAGIGFCTTMGAFFSFLAPIIRVEAESQFNS
PPAGLITLALFSLLSATLIFSLKFWPAKATAEVI

Sequences:

>Translated_434_residues
MSNFNHYPDPTLNSAIKKAWYRLMPLMFIMYFVAFIDRINVGFAKDAMSADIGLSQSAFALGAGIFFAAYALFGIPANLM
MNKLGAKVWLSSTTVVWGLLSAGTGLVSNEYQFVILRFLLGVAEAGFYPGILLLASIYFPNKIRASVIGIFVLGVPAALT
LGSPISGALLDMQGFLGQPGWFWMFLLEGLPAVGLGIFAFFYLDDSPATARYLNPEEKQALLTQLSIEQSDTESSSVKAV
LLSPKVWHLALIYGTIQVGVYGLIFFLPSQVATLLGSTLGFKESLVAAIPWAFSALGVYYIPRYADRKTHRRNPIATLNL
VVAAIGLIISAYASPVLAIAALCLCAIGFLAVQPIFWTFPAQILSGKALAAGIGFCTTMGAFFSFLAPIIRVEAESQFNS
PPAGLITLALFSLLSATLIFSLKFWPAKATAEVI
>Mature_433_residues
SNFNHYPDPTLNSAIKKAWYRLMPLMFIMYFVAFIDRINVGFAKDAMSADIGLSQSAFALGAGIFFAAYALFGIPANLMM
NKLGAKVWLSSTTVVWGLLSAGTGLVSNEYQFVILRFLLGVAEAGFYPGILLLASIYFPNKIRASVIGIFVLGVPAALTL
GSPISGALLDMQGFLGQPGWFWMFLLEGLPAVGLGIFAFFYLDDSPATARYLNPEEKQALLTQLSIEQSDTESSSVKAVL
LSPKVWHLALIYGTIQVGVYGLIFFLPSQVATLLGSTLGFKESLVAAIPWAFSALGVYYIPRYADRKTHRRNPIATLNLV
VAAIGLIISAYASPVLAIAALCLCAIGFLAVQPIFWTFPAQILSGKALAAGIGFCTTMGAFFSFLAPIIRVEAESQFNSP
PAGLITLALFSLLSATLIFSLKFWPAKATAEVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Escherichia coli, GI87082071, Length=422, Percent_Identity=53.5545023696682, Blast_Score=463, Evalue=1e-131,
Organism=Escherichia coli, GI2367379, Length=293, Percent_Identity=23.2081911262799, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1789152, Length=261, Percent_Identity=26.0536398467433, Blast_Score=63, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6321698, Length=335, Percent_Identity=24.4776119402985, Blast_Score=88, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6322025, Length=216, Percent_Identity=25, Blast_Score=84, Evalue=6e-17,
Organism=Saccharomyces cerevisiae, GI6323032, Length=261, Percent_Identity=24.5210727969349, Blast_Score=74, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6322612, Length=281, Percent_Identity=23.1316725978648, Blast_Score=71, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6319250, Length=221, Percent_Identity=22.1719457013575, Blast_Score=65, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6319876, Length=257, Percent_Identity=21.4007782101167, Blast_Score=64, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46731; Mature: 46599

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNFNHYPDPTLNSAIKKAWYRLMPLMFIMYFVAFIDRINVGFAKDAMSADIGLSQSAFA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHH
LGAGIFFAAYALFGIPANLMMNKLGAKVWLSSTTVVWGLLSAGTGLVSNEYQFVILRFLL
HHHHHHHHHHHHHCCCHHHHHHHHCHHHEECHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
GVAEAGFYPGILLLASIYFPNKIRASVIGIFVLGVPAALTLGSPISGALLDMQGFLGQPG
HHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCH
WFWMFLLEGLPAVGLGIFAFFYLDDSPATARYLNPEEKQALLTQLSIEQSDTESSSVKAV
HHHHHHHHCCCHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEE
LLSPKVWHLALIYGTIQVGVYGLIFFLPSQVATLLGSTLGFKESLVAAIPWAFSALGVYY
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
IPRYADRKTHRRNPIATLNLVVAAIGLIISAYASPVLAIAALCLCAIGFLAVQPIFWTFP
CCCHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQILSGKALAAGIGFCTTMGAFFSFLAPIIRVEAESQFNSPPAGLITLALFSLLSATLIF
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHH
SLKFWPAKATAEVI
HHCCCCCCCHHCCC
>Mature Secondary Structure 
SNFNHYPDPTLNSAIKKAWYRLMPLMFIMYFVAFIDRINVGFAKDAMSADIGLSQSAFA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHH
LGAGIFFAAYALFGIPANLMMNKLGAKVWLSSTTVVWGLLSAGTGLVSNEYQFVILRFLL
HHHHHHHHHHHHHCCCHHHHHHHHCHHHEECHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
GVAEAGFYPGILLLASIYFPNKIRASVIGIFVLGVPAALTLGSPISGALLDMQGFLGQPG
HHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCH
WFWMFLLEGLPAVGLGIFAFFYLDDSPATARYLNPEEKQALLTQLSIEQSDTESSSVKAV
HHHHHHHHCCCHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEE
LLSPKVWHLALIYGTIQVGVYGLIFFLPSQVATLLGSTLGFKESLVAAIPWAFSALGVYY
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
IPRYADRKTHRRNPIATLNLVVAAIGLIISAYASPVLAIAALCLCAIGFLAVQPIFWTFP
CCCHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQILSGKALAAGIGFCTTMGAFFSFLAPIIRVEAESQFNSPPAGLITLALFSLLSATLIF
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHH
SLKFWPAKATAEVI
HHCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]