| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
Click here to switch to the map view.
The map label for this gene is nagK [H]
Identifier: 108812164
GI number: 108812164
Start: 2264215
End: 2264382
Strand: Reverse
Name: nagK [H]
Synonym: YPN_2002
Alternate gene names: 108812164
Gene position: 2264382-2264215 (Counterclockwise)
Preceding gene: 108812165
Following gene: 108812163
Centisome position: 49.94
GC content: 51.79
Gene sequence:
>168_bases GTGGTGGGTGGGGGGTTGTCTAATTTCGAAAAAATCTATCAGGAGCTGCCAAAGCGCTTGCCTGCGCATTTATTGCGAGT GGCCCGGTTACCGCGTATCGAAAAAGCGCGTTATGGTGATTCCGGGGGCGTTCGTGGTGCAGCGTTTCTGCATTTGGCAG AAAAATAA
Upstream 100 bases:
>100_bases GCGGGTGAGCCAAAGGCGGTGGCACATGTTGAGCGCTTTATGGATGTGCTGGCGGTCTGTTTGGGCAATCTTTTGACTAT GCTCGGATCCCCATTTGGTC
Downstream 100 bases:
>100_bases TCGTCACGATTAATAACAAGACAGATAAAGAAAAAGAGGCAAAAGGTTATGCGCATTCGCCATAGGCTGTGTCGGTTTCG TAAGAGTAAGCATGTGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: GlcNAc kinase [H]
Number of amino acids: Translated: 55; Mature: 55
Protein sequence:
>55_residues MVGGGLSNFEKIYQELPKRLPAHLLRVARLPRIEKARYGDSGGVRGAAFLHLAEK
Sequences:
>Translated_55_residues MVGGGLSNFEKIYQELPKRLPAHLLRVARLPRIEKARYGDSGGVRGAAFLHLAEK >Mature_55_residues MVGGGLSNFEKIYQELPKRLPAHLLRVARLPRIEKARYGDSGGVRGAAFLHLAEK
Specific function: Catalyzes the phosphorylation of N-acetyl-D-glucosamine (GlcNAc) derived from cell-wall degradation, yielding GlcNAc-6-P [H]
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family. NagK subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787363, Length=54, Percent_Identity=66.6666666666667, Blast_Score=78, Evalue=1e-16,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.59 [H]
Molecular weight: Translated: 6088; Mature: 6088
Theoretical pI: Translated: 10.87; Mature: 10.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGGGLSNFEKIYQELPKRLPAHLLRVARLPRIEKARYGDSGGVRGAAFLHLAEK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHEECCC >Mature Secondary Structure MVGGGLSNFEKIYQELPKRLPAHLLRVARLPRIEKARYGDSGGVRGAAFLHLAEK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA