| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is cheA [H]
Identifier: 108812126
GI number: 108812126
Start: 2220859
End: 2223024
Strand: Reverse
Name: cheA [H]
Synonym: YPN_1964
Alternate gene names: 108812126
Gene position: 2223024-2220859 (Counterclockwise)
Preceding gene: 108812127
Following gene: 108812125
Centisome position: 49.02
GC content: 50.14
Gene sequence:
>2166_bases ATGGATATTACCGCGTTTTATCAGACGTTTTTTGATGAAGCAGATGAACTGTTGGCAGATATGGAACAGCATTTGTTATT GCTGGACCCGCTGACACCTGACAATGAACAGCTTAATGCTATTTTCCGTGCTGCACATTCGATCAAGGGCGGTGCCGCTA CTTTTGGTTTTACGGTATTGCAAGAGACAACTCATCTATTGGAAAACCTGTTGGATGGTGCTCGCCGCGACGAGATGCGC TTAAGCACTGAGATCATCAACCTGTTTTTGGAAACGAAAGATATTATGCAGGAACAGTTGGACGCCTACAAAACCTCTCA GGAACCTCATTCGGAAAGCTTTGAGTACATTTGTCAGGCGTTGCGCCAATTGGCACTTGATGCTTTAGATCAACCTACAA CCGAAGATCAACCTACAACCGAAAATCAATCCGCTACCGATCAGCACAGTACGGCCGCCAATACGCAAGCAACGGCTTCC ACCCGCGTATCATCTTCTCTCGCTGGCAACACATCACCCGCGTTGCTTCAAGGCGGGATGCGTATTCGTTTGTCTGGCCT GAAAGCGCCAGAAATCTCTCTGATGCTGGAGGAACTGGGTAATCTGGGCGAGGTGCAAGATCCCCATCAGGGCGCTGATA GCCTTGAGGCCACCTTAATAACCTCCGTCAGTGAAGAGGATATTAGCGCGGTATTGTGCTTTGTTCTGGAACCTGAGCAG ATTAGCTTTGTGTCCGCAGGGGACACCGAGCAGATTTATGCTGAGCAGACCGTTGAATCAGAACAATCATCTGAGCCAGA ACGCTTGTTTGAGCCAGCAATAACCGAGGCATCGGTGATCGCAGAATCGGTTCAGCCGGTGGCAACACCTGCCGCAACAC CTGCCGTTGAAGTCCAAAGCACGCTGAAAGCTGATGTGCATGCTGCACCAGCTAACGCAGAACAGGTCAGGCCTAAAGCG AAAGCCAGTGAATCGACCAGTATCCGTGTAGCGGTAGAAAAAGTGGACCAGCTGATTAACCTGGTCGGCGAATTGGTTAT TACCCAATCGATGCTCGCTCAGCGCTCAAGTTCGCTGGATCCGGTGATCAACGGTGATTTACTGAATAGCATGGGGCAGT TGGAACGTAACGCCCGCGATTTGCAAGAATCCGTCATGTCTATCCGGATGATGCCAATGGAGTATGTATTTAGCCGCTTC CCACGTTTGGTCCGTGATTTAGCCAGCAAGCTCAACAAACAAGTTGAATTGACGCTGTTAGGCAGTTCGACAGAACTGGA TAAGAGTTTGATTGAGCGCATTATCGATCCTCTGACCCACTTGGTGCGCAACAGTCTGGACCACGGTATTGAAGAGCCGG CTACTCGTATTGCTGCGGGGAAATCGCCAGTGGGCAACCTGACACTGTCAGCTGAACATCAGGGCGGAAATATTTGTATC GAAGTCATTGATGATGGTGCTGGCCTGAATCGACAGAGAATTTTGGCGAAAGCACAGTCTCAAGGGCTGGCAGTCAACGA AAACATGAGCGATGAAGACGTTGGGATGCTTATTTTTGCACAAGGATTCTCTACTGCCGAACAAGTCACGGATGTGTCAG GGCGTGGTGTCGGGATGGATGTGGTCAAACGTAACATCCAGGAAATGGGCGGCCATGTACAGGTCAGTTTTCAGGCCGGT TTAGGTACCTCAATCCGTATCCTGCTGCCATTAACGCTGGCTATCCTTGATGGCATGTCGGTTAAAGTCAGCAATGAAGT CTTTATCTTGCCATTGAATGCCGTGATGGAGTCACTGCAACCCTTGGCCGAAGACCTACATCCATTAGCCGGTGGTGAGC GCGTGCTGCAAGTTCGCGGTGAATTTCTACCATTGGTTGAATTGTACCGCGTCTTTGATGTTAAAAATGCCAAGACGGAA GCCACGCAAGGCATCGTTGTGATTCTACAAAGTGCCGGGCGCCGCTATGCACTGCTGGTAGACCAACTGATTGGTCAGCA TCAGGTGGTCGTGAAAAATCTGGAAAGTAACTATCGGAAAGTGCCGGGTATTTCTGCCGCCACCATTTTGGGTGATGGTA GCGTCGCGCTAATCGTTGATGTGTCAGCGTTGCAGGCCTTAAACCGTGAAAAACGCGTCGCGGCTGATGAGGTGGTTACC GCATAG
Upstream 100 bases:
>100_bases ACTGCCAATGGGCCAACGACATCGTTACCCGCAGCACCTGCAAGCAATATACCGGTCTCTCCGACAAGCCGCGACGCACA GTAGAGGTGACACCGTGAGC
Downstream 100 bases:
>100_bases CGCACAGGAATTTTTCCTTATAAAAACAGGTAATACCCTAAATAATTTGAGTGCAGCAAGCCACCACCGGCCACTTTAAA TATGACGGGTATCCAGGGCG
Product: chemotaxis protein CheA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 721; Mature: 721
Protein sequence:
>721_residues MDITAFYQTFFDEADELLADMEQHLLLLDPLTPDNEQLNAIFRAAHSIKGGAATFGFTVLQETTHLLENLLDGARRDEMR LSTEIINLFLETKDIMQEQLDAYKTSQEPHSESFEYICQALRQLALDALDQPTTEDQPTTENQSATDQHSTAANTQATAS TRVSSSLAGNTSPALLQGGMRIRLSGLKAPEISLMLEELGNLGEVQDPHQGADSLEATLITSVSEEDISAVLCFVLEPEQ ISFVSAGDTEQIYAEQTVESEQSSEPERLFEPAITEASVIAESVQPVATPAATPAVEVQSTLKADVHAAPANAEQVRPKA KASESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSSLDPVINGDLLNSMGQLERNARDLQESVMSIRMMPMEYVFSRF PRLVRDLASKLNKQVELTLLGSSTELDKSLIERIIDPLTHLVRNSLDHGIEEPATRIAAGKSPVGNLTLSAEHQGGNICI EVIDDGAGLNRQRILAKAQSQGLAVNENMSDEDVGMLIFAQGFSTAEQVTDVSGRGVGMDVVKRNIQEMGGHVQVSFQAG LGTSIRILLPLTLAILDGMSVKVSNEVFILPLNAVMESLQPLAEDLHPLAGGERVLQVRGEFLPLVELYRVFDVKNAKTE ATQGIVVILQSAGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQALNREKRVAADEVVT A
Sequences:
>Translated_721_residues MDITAFYQTFFDEADELLADMEQHLLLLDPLTPDNEQLNAIFRAAHSIKGGAATFGFTVLQETTHLLENLLDGARRDEMR LSTEIINLFLETKDIMQEQLDAYKTSQEPHSESFEYICQALRQLALDALDQPTTEDQPTTENQSATDQHSTAANTQATAS TRVSSSLAGNTSPALLQGGMRIRLSGLKAPEISLMLEELGNLGEVQDPHQGADSLEATLITSVSEEDISAVLCFVLEPEQ ISFVSAGDTEQIYAEQTVESEQSSEPERLFEPAITEASVIAESVQPVATPAATPAVEVQSTLKADVHAAPANAEQVRPKA KASESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSSLDPVINGDLLNSMGQLERNARDLQESVMSIRMMPMEYVFSRF PRLVRDLASKLNKQVELTLLGSSTELDKSLIERIIDPLTHLVRNSLDHGIEEPATRIAAGKSPVGNLTLSAEHQGGNICI EVIDDGAGLNRQRILAKAQSQGLAVNENMSDEDVGMLIFAQGFSTAEQVTDVSGRGVGMDVVKRNIQEMGGHVQVSFQAG LGTSIRILLPLTLAILDGMSVKVSNEVFILPLNAVMESLQPLAEDLHPLAGGERVLQVRGEFLPLVELYRVFDVKNAKTE ATQGIVVILQSAGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQALNREKRVAADEVVT A >Mature_721_residues MDITAFYQTFFDEADELLADMEQHLLLLDPLTPDNEQLNAIFRAAHSIKGGAATFGFTVLQETTHLLENLLDGARRDEMR LSTEIINLFLETKDIMQEQLDAYKTSQEPHSESFEYICQALRQLALDALDQPTTEDQPTTENQSATDQHSTAANTQATAS TRVSSSLAGNTSPALLQGGMRIRLSGLKAPEISLMLEELGNLGEVQDPHQGADSLEATLITSVSEEDISAVLCFVLEPEQ ISFVSAGDTEQIYAEQTVESEQSSEPERLFEPAITEASVIAESVQPVATPAATPAVEVQSTLKADVHAAPANAEQVRPKA KASESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSSLDPVINGDLLNSMGQLERNARDLQESVMSIRMMPMEYVFSRF PRLVRDLASKLNKQVELTLLGSSTELDKSLIERIIDPLTHLVRNSLDHGIEEPATRIAAGKSPVGNLTLSAEHQGGNICI EVIDDGAGLNRQRILAKAQSQGLAVNENMSDEDVGMLIFAQGFSTAEQVTDVSGRGVGMDVVKRNIQEMGGHVQVSFQAG LGTSIRILLPLTLAILDGMSVKVSNEVFILPLNAVMESLQPLAEDLHPLAGGERVLQVRGEFLPLVELYRVFDVKNAKTE ATQGIVVILQSAGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQALNREKRVAADEVVT A
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheA is autophosphorylated; it can transfer its phosphate group to either CheB or CheY [H]
COG id: COG0643
COG function: function code NT; Chemotaxis protein histidine kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HPt domain [H]
Homologues:
Organism=Escherichia coli, GI1788197, Length=714, Percent_Identity=69.7478991596639, Blast_Score=951, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002545 - InterPro: IPR015162 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR004105 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF01584 CheW; PF09078 CheY-binding; PF02895 H-kinase_dim; PF02518 HATPase_c; PF01627 Hpt [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 78110; Mature: 78110
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: PS50851 CHEW ; PS50894 HPT ; PS00039 DEAD_ATP_HELICASE ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDITAFYQTFFDEADELLADMEQHLLLLDPLTPDNEQLNAIFRAAHSIKGGAATFGFTVL CCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH QETTHLLENLLDGARRDEMRLSTEIINLFLETKDIMQEQLDAYKTSQEPHSESFEYICQA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LRQLALDALDQPTTEDQPTTENQSATDQHSTAANTQATASTRVSSSLAGNTSPALLQGGM HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCC RIRLSGLKAPEISLMLEELGNLGEVQDPHQGADSLEATLITSVSEEDISAVLCFVLEPEQ EEEECCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHEEECCCC ISFVSAGDTEQIYAEQTVESEQSSEPERLFEPAITEASVIAESVQPVATPAATPAVEVQS EEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHCCCCCCCHHHHHH TLKADVHAAPANAEQVRPKAKASESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSSLD HHHHHCCCCCCCHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PVINGDLLNSMGQLERNARDLQESVMSIRMMPMEYVFSRFPRLVRDLASKLNKQVELTLL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEE GSSTELDKSLIERIIDPLTHLVRNSLDHGIEEPATRIAAGKSPVGNLTLSAEHQGGNICI CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEECCCCCEEE EVIDDGAGLNRQRILAKAQSQGLAVNENMSDEDVGMLIFAQGFSTAEQVTDVSGRGVGMD EEEECCCCCCHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCHHHHHHCCCCCCCCHH VVKRNIQEMGGHVQVSFQAGLGTSIRILLPLTLAILDGMSVKVSNEVFILPLNAVMESLQ HHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCEEEEEHHHHHHHHH PLAEDLHPLAGGERVLQVRGEFLPLVELYRVFDVKNAKTEATQGIVVILQSAGRRYALLV HHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHCCCEEEEECCCCCHHHHH DQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQALNREKRVAADEVVT HHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEHHHHHHHCHHHHHHHHHHHC A C >Mature Secondary Structure MDITAFYQTFFDEADELLADMEQHLLLLDPLTPDNEQLNAIFRAAHSIKGGAATFGFTVL CCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH QETTHLLENLLDGARRDEMRLSTEIINLFLETKDIMQEQLDAYKTSQEPHSESFEYICQA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LRQLALDALDQPTTEDQPTTENQSATDQHSTAANTQATASTRVSSSLAGNTSPALLQGGM HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHCCC RIRLSGLKAPEISLMLEELGNLGEVQDPHQGADSLEATLITSVSEEDISAVLCFVLEPEQ EEEECCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHEEECCCC ISFVSAGDTEQIYAEQTVESEQSSEPERLFEPAITEASVIAESVQPVATPAATPAVEVQS EEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHCCCCCCCHHHHHH TLKADVHAAPANAEQVRPKAKASESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSSLD HHHHHCCCCCCCHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PVINGDLLNSMGQLERNARDLQESVMSIRMMPMEYVFSRFPRLVRDLASKLNKQVELTLL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEE GSSTELDKSLIERIIDPLTHLVRNSLDHGIEEPATRIAAGKSPVGNLTLSAEHQGGNICI CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEECCCCCEEE EVIDDGAGLNRQRILAKAQSQGLAVNENMSDEDVGMLIFAQGFSTAEQVTDVSGRGVGMD EEEECCCCCCHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCHHHHHHCCCCCCCCHH VVKRNIQEMGGHVQVSFQAGLGTSIRILLPLTLAILDGMSVKVSNEVFILPLNAVMESLQ HHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCEEEEEHHHHHHHHH PLAEDLHPLAGGERVLQVRGEFLPLVELYRVFDVKNAKTEATQGIVVILQSAGRRYALLV HHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHCCCEEEEECCCCCHHHHH DQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQALNREKRVAADEVVT HHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEHHHHHHHCHHHHHHHHHHHC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3278311; 11677609 [H]