| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is 108811959
Identifier: 108811959
GI number: 108811959
Start: 2033146
End: 2033355
Strand: Reverse
Name: 108811959
Synonym: YPN_1797
Alternate gene names: NA
Gene position: 2033355-2033146 (Counterclockwise)
Preceding gene: 108811960
Following gene: 108811954
Centisome position: 44.84
GC content: 45.71
Gene sequence:
>210_bases ATGCAACGTCAAGCGATGGGCGTTGCGCTCCATATTTGTTATACTTTTATTTTGAATTACTGCATAGCATTTAATTGTTA CGGTGCCGATGTTGAAAAACATCGGCATTTTTTTGTGCGCCGGGCATGGCGCGTAGTATTGCGCTGTGACGTAAATCTGA CCGATCTGCCCGACCTGTATCTGAGTACTTGCCCATGCTGGATGATCTGA
Upstream 100 bases:
>100_bases CCGAAGAAAATAGAGCGTGCAGGGTGGGATTAGTCACCGAAAAATTGAGCCACATCAAGACTTTGTTGTGGTGGCTCAGG CATGATTATTTTGCAGGTGA
Downstream 100 bases:
>100_bases TGCTTATTCCTCGTCTACACCATGGTCATGAAGTGCATAAGGCAAATACTTAATTTGTTGATGAAGGAGTCAATACTGTT GGTGTCTCGTGGGACCCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>69_residues MQRQAMGVALHICYTFILNYCIAFNCYGADVEKHRHFFVRRAWRVVLRCDVNLTDLPDLYLSTCPCWMI
Sequences:
>Translated_69_residues MQRQAMGVALHICYTFILNYCIAFNCYGADVEKHRHFFVRRAWRVVLRCDVNLTDLPDLYLSTCPCWMI >Mature_69_residues MQRQAMGVALHICYTFILNYCIAFNCYGADVEKHRHFFVRRAWRVVLRCDVNLTDLPDLYLSTCPCWMI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8203; Mature: 8203
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 13.0 %Cys+Met (Translated Protein) 8.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 13.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRQAMGVALHICYTFILNYCIAFNCYGADVEKHRHFFVRRAWRVVLRCDVNLTDLPDLY CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH LSTCPCWMI HHCCCCCCC >Mature Secondary Structure MQRQAMGVALHICYTFILNYCIAFNCYGADVEKHRHFFVRRAWRVVLRCDVNLTDLPDLY CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH LSTCPCWMI HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA