| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is 108811862
Identifier: 108811862
GI number: 108811862
Start: 1915174
End: 1915422
Strand: Reverse
Name: 108811862
Synonym: YPN_1700
Alternate gene names: NA
Gene position: 1915422-1915174 (Counterclockwise)
Preceding gene: 108811864
Following gene: 108811860
Centisome position: 42.24
GC content: 42.57
Gene sequence:
>249_bases ATGGCAGATATCACGTTCACTCGTGAACAGACTCAACGAATGGTCCATAAAATTCAGCGCTATCTGGAGCAAGAACACAA TATTGAATTAGAGGATTTTGATGCGGAATTTTTCGTGGAATTTATTAGCCGTGAGTTAGGTGCGCATTACTATAACCAAG GCATCAATGACGCTATTGCACAGATTGAAGCCAAAATGCTTGATGTTACCGATTCGCTGCTCTGGCTGGAAAAACCCGTG CAAGACTGA
Upstream 100 bases:
>100_bases TCTTTATTTAGCGTATTATGCGTAAAAATTGACTCAGTAATTAACCCGGACCCCATGCGCAAGCGATCCTCAGTTCAATA AACATATCGGAGCAATAAAC
Downstream 100 bases:
>100_bases ACACGGGCTCATTATTTATGTTTTGCCTTTATTGGCCGTAGTACGCATCCTTGCCATGTTTACGTAAGTAATGCTTATCC AGCAGTTGCGGTTGCATATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MADITFTREQTQRMVHKIQRYLEQEHNIELEDFDAEFFVEFISRELGAHYYNQGINDAIAQIEAKMLDVTDSLLWLEKPV QD
Sequences:
>Translated_82_residues MADITFTREQTQRMVHKIQRYLEQEHNIELEDFDAEFFVEFISRELGAHYYNQGINDAIAQIEAKMLDVTDSLLWLEKPV QD >Mature_81_residues ADITFTREQTQRMVHKIQRYLEQEHNIELEDFDAEFFVEFISRELGAHYYNQGINDAIAQIEAKMLDVTDSLLWLEKPVQ D
Specific function: Unknown
COG id: COG5460
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9777; Mature: 9646
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADITFTREQTQRMVHKIQRYLEQEHNIELEDFDAEFFVEFISRELGAHYYNQGINDAIA CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHH QIEAKMLDVTDSLLWLEKPVQD HHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ADITFTREQTQRMVHKIQRYLEQEHNIELEDFDAEFFVEFISRELGAHYYNQGINDAIA CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHH QIEAKMLDVTDSLLWLEKPVQD HHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA