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The map label for this gene is yciU [C]

Identifier: 108811816

GI number: 108811816

Start: 1872846

End: 1873199

Strand: Reverse

Name: yciU [C]

Synonym: YPN_1654

Alternate gene names: 108811816

Gene position: 1873199-1872846 (Counterclockwise)

Preceding gene: 108811817

Following gene: 108811808

Centisome position: 41.31

GC content: 44.35

Gene sequence:

>354_bases
ATGGACCAGAACACACAAGAGCCAAGCTCGATGGATCTCAATAATCGCCTCACTGAAGATGAAACACTGGAACAGGCATA
CGATATTTTTCTGGAACTCGCGGGGGATAACCTCGATCCAGCCGATATTCTATTGTTTAATCTTCAGTTTGAAGAGCGCG
GTGGTGCTGAGTTGTTTGATCCGGCGGAAGATTGGCAGGAGCATGTCGATTTTGACATAAATCCTGACTTTTTCGCTGAA
GTTGTTATCGGTTTAGCCGACAGTGATGGTGAGGAAATTAACGATATTTTTGCCCGAGTACTGCTGTGCCGAGAGAAAGA
TCACAAGCTTTGCCACATATTATGGAAAGAATAA

Upstream 100 bases:

>100_bases
TTATCTGAATGAGCGGTATTGGGCAGGATAAAAATTGTAAAAAACCTAGCGAGAATGTTTTAATTAGCACAATCCGCAAA
TGATAAATGGGAATCTGCAC

Downstream 100 bases:

>100_bases
AGTTATCAAAAAAATAAAGAGTTAATCATTGCCCCATAGTTCAACCCCGGGGCAATGTATCTTAATTATCCTTAGCAAGA
GCACGACTAAAATACAGGAT

Product: dsDNA-mimic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MDQNTQEPSSMDLNNRLTEDETLEQAYDIFLELAGDNLDPADILLFNLQFEERGGAELFDPAEDWQEHVDFDINPDFFAE
VVIGLADSDGEEINDIFARVLLCREKDHKLCHILWKE

Sequences:

>Translated_117_residues
MDQNTQEPSSMDLNNRLTEDETLEQAYDIFLELAGDNLDPADILLFNLQFEERGGAELFDPAEDWQEHVDFDINPDFFAE
VVIGLADSDGEEINDIFARVLLCREKDHKLCHILWKE
>Mature_117_residues
MDQNTQEPSSMDLNNRLTEDETLEQAYDIFLELAGDNLDPADILLFNLQFEERGGAELFDPAEDWQEHVDFDINPDFFAE
VVIGLADSDGEEINDIFARVLLCREKDHKLCHILWKE

Specific function: Unknown

COG id: COG3099

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0263 family [H]

Homologues:

Organism=Escherichia coli, GI87081860, Length=107, Percent_Identity=90.6542056074766, Blast_Score=202, Evalue=5e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007376
- ProDom:   PD020447 [H]

Pfam domain/function: PF04269 DUF440 [H]

EC number: NA

Molecular weight: Translated: 13531; Mature: 13531

Theoretical pI: Translated: 3.70; Mature: 3.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQNTQEPSSMDLNNRLTEDETLEQAYDIFLELAGDNLDPADILLFNLQFEERGGAELFD
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCC
PAEDWQEHVDFDINPDFFAEVVIGLADSDGEEINDIFARVLLCREKDHKLCHILWKE
CHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECC
>Mature Secondary Structure
MDQNTQEPSSMDLNNRLTEDETLEQAYDIFLELAGDNLDPADILLFNLQFEERGGAELFD
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCC
PAEDWQEHVDFDINPDFFAEVVIGLADSDGEEINDIFARVLLCREKDHKLCHILWKE
CHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA