| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is 108811726
Identifier: 108811726
GI number: 108811726
Start: 1775465
End: 1776109
Strand: Reverse
Name: 108811726
Synonym: YPN_1563
Alternate gene names: NA
Gene position: 1776109-1775465 (Counterclockwise)
Preceding gene: 108811731
Following gene: 108811723
Centisome position: 39.17
GC content: 50.23
Gene sequence:
>645_bases GTGGTTAATCTCTTTTTCGTTCTGCGCGATATGACACTGCGTGAATGCCTTATCGAGGCATTAATTTTAACCCCCTACTC TCGCGATGAATTTACCGATGCATACGGCGAAGCGGAAACGATGGTCGAGAGGGCGCGGAAATTAGTCATCAGGGCAACAA TGGGATTTGGTTCTGCTGGCGCGACCAAGGGAACAACTGGTTTTCGGCTGGATACCAAACGCGGTTCGGCAACAGCTCAA CACCTTTGGGCAAGGATGCCTGAAAACTTGGCAGCAGTTGGCCAGCGATTCGAGGGCGTTTTGGTAGAGAATCGTGATGC CGTCCAATGCATGTTAGACCATGACACAGTTTCAACGCTTCATTTTGTTGACCCGCCATACGTCCATGACACCCGCGTTA TCTCATCCCGATATTACCGCCATGAAATGGACAATGATGCCCACCTAACCCTACTCGATACCGTCAATAACCTTGAGGGG ATGGTAGTGCTTAGCGGCTACAACACGGATATGTACAACGACATTCTTACAGGCTGGCAAAAGCAGGAAAAACAGTCATC GGCTGCCGGACGGAAAGGCTCGGTTAAGCGCCTTGAGTGTCTGTGGCTGAGTCCTAATGTTTTGTCTGGGAGTAAAGCAG CATGA
Upstream 100 bases:
>100_bases ACGAAGACCTTTTTATCCATTTTCTTTCTCCGGCGCGGCGTCTGTATTGCTGAGAAAAGAGCGAAGCTACGCGGAGATTT ATAACGATTTAGATGGCGAC
Downstream 100 bases:
>100_bases ACTTAATCATCACATATCTTGACTGGATCCTGCTTGGAATCGGCGGCTGTGCGGCGCACTGGTGGCTGTATTGCTGGAAG GAGTGAATGTGTGACTCCTG
Product: methyltransferase
Products: NA
Alternate protein names: Methyltransferase; DNA Adenine Methyltransferase; Adenine-Specific DNA Methyltransferase; Phage Methylase; N6 Adenine-Specific DNA Methyltransferase Protein; Prophage DNA Methylase; Methylase; Site-Specific DNA Methylase
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MVNLFFVLRDMTLRECLIEALILTPYSRDEFTDAYGEAETMVERARKLVIRATMGFGSAGATKGTTGFRLDTKRGSATAQ HLWARMPENLAAVGQRFEGVLVENRDAVQCMLDHDTVSTLHFVDPPYVHDTRVISSRYYRHEMDNDAHLTLLDTVNNLEG MVVLSGYNTDMYNDILTGWQKQEKQSSAAGRKGSVKRLECLWLSPNVLSGSKAA
Sequences:
>Translated_214_residues MVNLFFVLRDMTLRECLIEALILTPYSRDEFTDAYGEAETMVERARKLVIRATMGFGSAGATKGTTGFRLDTKRGSATAQ HLWARMPENLAAVGQRFEGVLVENRDAVQCMLDHDTVSTLHFVDPPYVHDTRVISSRYYRHEMDNDAHLTLLDTVNNLEG MVVLSGYNTDMYNDILTGWQKQEKQSSAAGRKGSVKRLECLWLSPNVLSGSKAA >Mature_214_residues MVNLFFVLRDMTLRECLIEALILTPYSRDEFTDAYGEAETMVERARKLVIRATMGFGSAGATKGTTGFRLDTKRGSATAQ HLWARMPENLAAVGQRFEGVLVENRDAVQCMLDHDTVSTLHFVDPPYVHDTRVISSRYYRHEMDNDAHLTLLDTVNNLEG MVVLSGYNTDMYNDILTGWQKQEKQSSAAGRKGSVKRLECLWLSPNVLSGSKAA
Specific function: Unknown
COG id: COG0338
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23998; Mature: 23998
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNLFFVLRDMTLRECLIEALILTPYSRDEFTDAYGEAETMVERARKLVIRATMGFGSAG CEEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHHEECCCCCCC ATKGTTGFRLDTKRGSATAQHLWARMPENLAAVGQRFEGVLVENRDAVQCMLDHDTVSTL CCCCCCCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHCCEEEECCCCEEEEECCCCCCEE HFVDPPYVHDTRVISSRYYRHEMDNDAHLTLLDTVNNLEGMVVLSGYNTDMYNDILTGWQ EECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCHHHHHHHHCHH KQEKQSSAAGRKGSVKRLECLWLSPNVLSGSKAA HHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCC >Mature Secondary Structure MVNLFFVLRDMTLRECLIEALILTPYSRDEFTDAYGEAETMVERARKLVIRATMGFGSAG CEEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHHEECCCCCCC ATKGTTGFRLDTKRGSATAQHLWARMPENLAAVGQRFEGVLVENRDAVQCMLDHDTVSTL CCCCCCCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHCCEEEECCCCEEEEECCCCCCEE HFVDPPYVHDTRVISSRYYRHEMDNDAHLTLLDTVNNLEGMVVLSGYNTDMYNDILTGWQ EECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCHHHHHHHHCHH KQEKQSSAAGRKGSVKRLECLWLSPNVLSGSKAA HHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA