Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108811669

Identifier: 108811669

GI number: 108811669

Start: 1708947

End: 1710029

Strand: Reverse

Name: 108811669

Synonym: YPN_1506

Alternate gene names: NA

Gene position: 1710029-1708947 (Counterclockwise)

Preceding gene: 108811670

Following gene: 108811668

Centisome position: 37.71

GC content: 51.06

Gene sequence:

>1083_bases
ATGAAAAAAACACTGATAACGCTAATGAGCGGGCTGTTATTCAGTTCGCTAACACTCGCAGCCCAGACCAGCGACTGGGA
CTCTGTGGTTGCGCAGGCAAAAAAAGAAGGCAGCGTGACTTTTAACGTTTGGTATCTACAACCACAGTGGCGCAGTTTTG
TGAAAAATTTTGAACAAAAGTACGACATCAAGGTGCGTATTCCAGAAGGCAGCATTGACGGCAATATGAACAAATTGCTG
GCAGAGACACGCCGGGAGCAAGGGAAGATCGATGTCATTGCCCTCTCTATCGCACAATTACCGATCACGATGGGCGCGAA
ATCACTGGCTAAAGTGGATGATTTACCGGGTTATCAGGATGCGTATCACCAGTTACAGAACGTCGATACCCAAGGTTACG
CCGTAGCATTCTGGGGCAACCAGACCGGTTTTGCCTACGATCCCCAACAGATGGGTGATCGACCATTGCCACAGACCATG
GAGGAACTCCAACGTTTTATCGACGCCAATCCGAAGCGGTTCGGTTATAACGATCCGAACAACGGGGGGGCGGGGGAAGC
CTTTATCCAACGCATCGTCACCACGCTGAGCGGCGACTTTAGCAGCGAGTCTGACACTGTTGACCCAACGGTAATAAAAA
ACTGGCAGAAAGGTTGGCAGTGGTTTGCGTCCAATAATAACAATATTACCCGCACGGCGTCCGGTGCCGATAGCCTGACA
CGCCTCAACGATGGCGAACTGATGCTGACACCTGCCTGGGAAGACCACCTTTCCGGCTTACAAAAGACCGGCGCAATCAC
CTCCAGGTTGAAATTCTATGTGCCTGAGTTTGGTATGCCCGGCGGTGGCAATATTGCCAGTATCGCAGCCAACAGCCCGC
ACCCGGCGGCCTCCAGAGTGTTCCTAAACTGGCTGATTCAGGCAGATACCCAGAAAGCGCTGAACGAGGCGTTCGGTTCC
ACCCCAATGAACAAGCAACTGAATGCTGATGTAAAACAGCCTGACACACCCGTTCAGTTTTACGGTAAGGCGTACAGTAT
GCAGATGAAAAAAGAGTTTGCTCGTCAGGTAATGACACGATAA

Upstream 100 bases:

>100_bases
ATCCCCAATGTCATTTTGATGATCATCATTGAGAAGCTTTTGAAGGGTAATTATCTGTCACAGTCCACCGGGAAAGCCTG
ATTTTACAGGAGATAATCAC

Downstream 100 bases:

>100_bases
ATCTGGCGACACAAAAAGGCAGAACGCAGAAGGTTCATGGTTAGGAAATTTGCTGATATTTTTTGTTCTGTTTCCTTGGC
GGGTACAGTCGCTGTATTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MKKTLITLMSGLLFSSLTLAAQTSDWDSVVAQAKKEGSVTFNVWYLQPQWRSFVKNFEQKYDIKVRIPEGSIDGNMNKLL
AETRREQGKIDVIALSIAQLPITMGAKSLAKVDDLPGYQDAYHQLQNVDTQGYAVAFWGNQTGFAYDPQQMGDRPLPQTM
EELQRFIDANPKRFGYNDPNNGGAGEAFIQRIVTTLSGDFSSESDTVDPTVIKNWQKGWQWFASNNNNITRTASGADSLT
RLNDGELMLTPAWEDHLSGLQKTGAITSRLKFYVPEFGMPGGGNIASIAANSPHPAASRVFLNWLIQADTQKALNEAFGS
TPMNKQLNADVKQPDTPVQFYGKAYSMQMKKEFARQVMTR

Sequences:

>Translated_360_residues
MKKTLITLMSGLLFSSLTLAAQTSDWDSVVAQAKKEGSVTFNVWYLQPQWRSFVKNFEQKYDIKVRIPEGSIDGNMNKLL
AETRREQGKIDVIALSIAQLPITMGAKSLAKVDDLPGYQDAYHQLQNVDTQGYAVAFWGNQTGFAYDPQQMGDRPLPQTM
EELQRFIDANPKRFGYNDPNNGGAGEAFIQRIVTTLSGDFSSESDTVDPTVIKNWQKGWQWFASNNNNITRTASGADSLT
RLNDGELMLTPAWEDHLSGLQKTGAITSRLKFYVPEFGMPGGGNIASIAANSPHPAASRVFLNWLIQADTQKALNEAFGS
TPMNKQLNADVKQPDTPVQFYGKAYSMQMKKEFARQVMTR
>Mature_360_residues
MKKTLITLMSGLLFSSLTLAAQTSDWDSVVAQAKKEGSVTFNVWYLQPQWRSFVKNFEQKYDIKVRIPEGSIDGNMNKLL
AETRREQGKIDVIALSIAQLPITMGAKSLAKVDDLPGYQDAYHQLQNVDTQGYAVAFWGNQTGFAYDPQQMGDRPLPQTM
EELQRFIDANPKRFGYNDPNNGGAGEAFIQRIVTTLSGDFSSESDTVDPTVIKNWQKGWQWFASNNNNITRTASGADSLT
RLNDGELMLTPAWEDHLSGLQKTGAITSRLKFYVPEFGMPGGGNIASIAANSPHPAASRVFLNWLIQADTQKALNEAFGS
TPMNKQLNADVKQPDTPVQFYGKAYSMQMKKEFARQVMTR

Specific function: Unknown

COG id: COG4134

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40086; Mature: 40086

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLITLMSGLLFSSLTLAAQTSDWDSVVAQAKKEGSVTFNVWYLQPQWRSFVKNFEQK
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHH
YDIKVRIPEGSIDGNMNKLLAETRREQGKIDVIALSIAQLPITMGAKSLAKVDDLPGYQD
CCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEEHHHCCHHHCHHHHHHHHCCCCHHH
AYHQLQNVDTQGYAVAFWGNQTGFAYDPQQMGDRPLPQTMEELQRFIDANPKRFGYNDPN
HHHHHHCCCCCCEEEEEECCCCCCEECHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
NGGAGEAFIQRIVTTLSGDFSSESDTVDPTVIKNWQKGWQWFASNNNNITRTASGADSLT
CCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCEEEECCCCHHHH
RLNDGELMLTPAWEDHLSGLQKTGAITSRLKFYVPEFGMPGGGNIASIAANSPHPAASRV
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEECCCCCCHHHHH
FLNWLIQADTQKALNEAFGSTPMNKQLNADVKQPDTPVQFYGKAYSMQMKKEFARQVMTR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKTLITLMSGLLFSSLTLAAQTSDWDSVVAQAKKEGSVTFNVWYLQPQWRSFVKNFEQK
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHH
YDIKVRIPEGSIDGNMNKLLAETRREQGKIDVIALSIAQLPITMGAKSLAKVDDLPGYQD
CCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEEHHHCCHHHCHHHHHHHHCCCCHHH
AYHQLQNVDTQGYAVAFWGNQTGFAYDPQQMGDRPLPQTMEELQRFIDANPKRFGYNDPN
HHHHHHCCCCCCEEEEEECCCCCCEECHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
NGGAGEAFIQRIVTTLSGDFSSESDTVDPTVIKNWQKGWQWFASNNNNITRTASGADSLT
CCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCEEEECCCCHHHH
RLNDGELMLTPAWEDHLSGLQKTGAITSRLKFYVPEFGMPGGGNIASIAANSPHPAASRV
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEECCCCCCHHHHH
FLNWLIQADTQKALNEAFGSTPMNKQLNADVKQPDTPVQFYGKAYSMQMKKEFARQVMTR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA