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The map label for this gene is 108811594

Identifier: 108811594

GI number: 108811594

Start: 1627844

End: 1629025

Strand: Reverse

Name: 108811594

Synonym: YPN_1431

Alternate gene names: NA

Gene position: 1629025-1627844 (Counterclockwise)

Preceding gene: 108811595

Following gene: 108811593

Centisome position: 35.92

GC content: 50.08

Gene sequence:

>1182_bases
ATGAGTGAACAGAGTATCGCTGAACGTGCCGGTTATTATCAAAGCATGATGCAGCCCATTCCAGGTGACTTTCCTTGTGG
CAAAAATCTGGAATATGACCCGGCATTTATTATGCTACAGACAAAATTGCAACCTAAGCAGGCCGCTGAATACGGCAATT
TTGTTGAGGTCGCTGAACCCAATAACTGGACAGATATCGAGCGTAAATGCCTTGAACTCCTGAATAATTCTCGGGATATT
CGGCTGTTTATTATTCTGATGCGCTGCCGGATGCGTCAGGTCGGTGTGGGCGCGTTGCAAGAAGGGCTGGAAGCCATACT
TTGGTGCCTCGACACTTGGCCTGATCAGCTACATCCTCAGTTGTTTGATGAAGGGGAATTTGAACCTTTAATGCGCGGTA
ATGCTTTTGCTGAACTGGAAGATATTGATGGTTTTATCGCCGACTTCCGTAATCAGCAGTTACCCAAAGCCGCTGGCGTG
CAACTTTCCATCAAAGAGTTTGAAAAAGCACACTCCGTTCCTCGAGAAGAAGGGGCATTGGACGAAGGGACTCTGGAAGC
CGTTAAGCAAGAGTGGCAGAACCGATCAGATCACACCATTCTCTCACTCCAGCACGCTTATGCCTTGTTGCAAGGATTAG
CCACGCGCCTCAACAACTCCCTCGGTGAAGACACACCTGATTTTGTCAGAATGACCTCAGTGTTACGCCACTTTGATGCC
GCGATAACCCCGATAGCGCCTATCGTGGTGCCGATCCCAGAAGTTGTCGAGCTCTATCCAGTCGCCACAGCGATGCTAGC
AAGCACAGAAATGCCAGTGACCGCCGAGGTACAGACGGTTGCAGAGACACAAATGGCCATACCCATTGAAGCTCCCCAAC
AGCGTCAAGCGGTGGTAACCCCATCCCCACAGTTGCAGCCGTTACAGTTGCAATCGGCACAGTTGCAACCTGTACCGATA
CAGTCACAGCCGGTGCCTGTCCAGCAGCAAGGGATCCAAAACAGGGCTGATGCATTAGCCCGGCTTATAGAGGTGCGAGA
GTGGTTTACCTCCATGGAACCGAGTAGCCCGGTCATTGCCTTACTGGCTTTTTCAGAAAAAACTATCGGCAAAAGCTTCG
GCGAATTGCTGCAGTTCATTCCTCAGGAACTGATTTCGAAACTCAATGAAGGACAGGAGTAA

Upstream 100 bases:

>100_bases
AATTAATGCATCGCTCTTAATCAATAATCTTCATGGCCAATATGCTGGCAGCAGAAAAAATAGACAACGACGTCCACCCA
TGGCGTTAAAAGGAACAAAC

Downstream 100 bases:

>100_bases
TTTGCCATGACAAGGAAGCTTTTTATATTGGTATTCGGTGCGGCCATAAGTGGACAAGTAAACGCCAGTTGTACACTCCA
CTTGGTGAGCAATTCAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: ImpA Domain-Containing Protein; Cytoplasmic Protein; ImpA Family Type VI Secretion-Associated Protein; ImpA Domain Protein; ImpA-Like; Type VI Secretion System Core Protein; Replication/Virulence Associated Protein; ImpA-Related N-Terminal Domain-Containing; Type VI Secretion-Associated Protein; Conserved Protein; Type VI Secretion System Protein ImpA; ImpA-Related N-Terminal Family Protein; T6ss A; ImpA-Like Protein

Number of amino acids: Translated: 393; Mature: 392

Protein sequence:

>393_residues
MSEQSIAERAGYYQSMMQPIPGDFPCGKNLEYDPAFIMLQTKLQPKQAAEYGNFVEVAEPNNWTDIERKCLELLNNSRDI
RLFIILMRCRMRQVGVGALQEGLEAILWCLDTWPDQLHPQLFDEGEFEPLMRGNAFAELEDIDGFIADFRNQQLPKAAGV
QLSIKEFEKAHSVPREEGALDEGTLEAVKQEWQNRSDHTILSLQHAYALLQGLATRLNNSLGEDTPDFVRMTSVLRHFDA
AITPIAPIVVPIPEVVELYPVATAMLASTEMPVTAEVQTVAETQMAIPIEAPQQRQAVVTPSPQLQPLQLQSAQLQPVPI
QSQPVPVQQQGIQNRADALARLIEVREWFTSMEPSSPVIALLAFSEKTIGKSFGELLQFIPQELISKLNEGQE

Sequences:

>Translated_393_residues
MSEQSIAERAGYYQSMMQPIPGDFPCGKNLEYDPAFIMLQTKLQPKQAAEYGNFVEVAEPNNWTDIERKCLELLNNSRDI
RLFIILMRCRMRQVGVGALQEGLEAILWCLDTWPDQLHPQLFDEGEFEPLMRGNAFAELEDIDGFIADFRNQQLPKAAGV
QLSIKEFEKAHSVPREEGALDEGTLEAVKQEWQNRSDHTILSLQHAYALLQGLATRLNNSLGEDTPDFVRMTSVLRHFDA
AITPIAPIVVPIPEVVELYPVATAMLASTEMPVTAEVQTVAETQMAIPIEAPQQRQAVVTPSPQLQPLQLQSAQLQPVPI
QSQPVPVQQQGIQNRADALARLIEVREWFTSMEPSSPVIALLAFSEKTIGKSFGELLQFIPQELISKLNEGQE
>Mature_392_residues
SEQSIAERAGYYQSMMQPIPGDFPCGKNLEYDPAFIMLQTKLQPKQAAEYGNFVEVAEPNNWTDIERKCLELLNNSRDIR
LFIILMRCRMRQVGVGALQEGLEAILWCLDTWPDQLHPQLFDEGEFEPLMRGNAFAELEDIDGFIADFRNQQLPKAAGVQ
LSIKEFEKAHSVPREEGALDEGTLEAVKQEWQNRSDHTILSLQHAYALLQGLATRLNNSLGEDTPDFVRMTSVLRHFDAA
ITPIAPIVVPIPEVVELYPVATAMLASTEMPVTAEVQTVAETQMAIPIEAPQQRQAVVTPSPQLQPLQLQSAQLQPVPIQ
SQPVPVQQQGIQNRADALARLIEVREWFTSMEPSSPVIALLAFSEKTIGKSFGELLQFIPQELISKLNEGQE

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43998; Mature: 43867

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQSIAERAGYYQSMMQPIPGDFPCGKNLEYDPAFIMLQTKLQPKQAAEYGNFVEVAEP
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHCCCEEEECCC
NNWTDIERKCLELLNNSRDIRLFIILMRCRMRQVGVGALQEGLEAILWCLDTWPDQLHPQ
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHCCHH
LFDEGEFEPLMRGNAFAELEDIDGFIADFRNQQLPKAAGVQLSIKEFEKAHSVPREEGAL
HCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHCCEEEHHHHHHHHCCCCCCCCC
DEGTLEAVKQEWQNRSDHTILSLQHAYALLQGLATRLNNSLGEDTPDFVRMTSVLRHFDA
CHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AITPIAPIVVPIPEVVELYPVATAMLASTEMPVTAEVQTVAETQMAIPIEAPQQRQAVVT
HHCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEC
PSPQLQPLQLQSAQLQPVPIQSQPVPVQQQGIQNRADALARLIEVREWFTSMEPSSPVIA
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
LLAFSEKTIGKSFGELLQFIPQELISKLNEGQE
EEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SEQSIAERAGYYQSMMQPIPGDFPCGKNLEYDPAFIMLQTKLQPKQAAEYGNFVEVAEP
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHCCCEEEECCC
NNWTDIERKCLELLNNSRDIRLFIILMRCRMRQVGVGALQEGLEAILWCLDTWPDQLHPQ
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHCCHH
LFDEGEFEPLMRGNAFAELEDIDGFIADFRNQQLPKAAGVQLSIKEFEKAHSVPREEGAL
HCCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHCCEEEHHHHHHHHCCCCCCCCC
DEGTLEAVKQEWQNRSDHTILSLQHAYALLQGLATRLNNSLGEDTPDFVRMTSVLRHFDA
CHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AITPIAPIVVPIPEVVELYPVATAMLASTEMPVTAEVQTVAETQMAIPIEAPQQRQAVVT
HHCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEC
PSPQLQPLQLQSAQLQPVPIQSQPVPVQQQGIQNRADALARLIEVREWFTSMEPSSPVIA
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
LLAFSEKTIGKSFGELLQFIPQELISKLNEGQE
EEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA