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The map label for this gene is yegD [H]

Identifier: 108811461

GI number: 108811461

Start: 1478992

End: 1480344

Strand: Reverse

Name: yegD [H]

Synonym: YPN_1298

Alternate gene names: 108811461

Gene position: 1480344-1478992 (Counterclockwise)

Preceding gene: 108811462

Following gene: 108811456

Centisome position: 32.65

GC content: 54.4

Gene sequence:

>1353_bases
ATGTTCATTGGATTTGACTACGGCACAGCAAACTGCTCAGTTGCCGTGATGCGGGATGATGCTCCCACGTTGTTGGCGTT
AGAAAATAACGACGTCTATTTACCGTCGATGTTGTGTGCACCCACACGCGAAGCCGTGAGTGAGTGTCTGCATCGTCACT
GGCAAGTGCCAACGGGCAGCGACGAAAACCAACAACTCTTGCGTCGGGCCATCGCGTTCAATCGCGAAGAAGATATTCCG
GTAACCGCCGATAGCCTGCTATTCGGCCTCTCCGCCCTTGCTCAATACATCGAAGACCCCGAAGAGGTTTACTTTGTAAA
ATCGCCAAAATCCTTTTTAGGCGCTAATGGCCTGAAACCTCAGCAATTGGCTCTGTTTGAAGATTTAGTCTGCGCCATGA
TGTTTCACATCAAGCGTCAGGCTGAATCCGTTTTGGCCGCAGAAATCCGTCAAACAGTCATTGGCCGCCCGGTAAACTTT
CAGGGTTCCGGCGGCGAAGACGCTAACCGGCAGGCGGAAGGGATTTTATTACGTGCCGCACAACGTGCCGGTTTCCGTGA
TATCGCCTTTCAATTTGAACCCGTGGCTGCGGGGCTGGATTTCGAAGCGACATTAACGGAAGAAAAAACCGTACTGGTCG
TGGATATCGGCGGGGGGACCACCGACTGTTCAGTCTTATTGATGGGGCCGAAGTGGCAAGGTTTGGCTGATCGCCAACAG
AGCCTGTTGGGGCATAGCGGCTGCCGTGTTGGGGGTAACGATCTCGACATCATGCTGGCCTTCAAACAATTGATGCCACT
GTTTGGGATGGGCGGTGAAACCGAGAAAGGGATTGCCATGCCGTCCCTACCATATTGGAATGCGGTTGCCACCAATGATG
TCCCGGCGCAAAGCGACTTCTACAGCACGGTTAATGGCCGTTTCCTGCGTGATCTCATCCGTGATGCCGCTAACCCACAA
CACGTTGAACGGCTGCTGAAAGTGTATCAACAGCGCCTGAGCTACCGCTTGGTTCGCGCCGCAGAAGAGAGCAAAATTGC
CCTGTCTGACCAAGAGCAGGTCGCTACAACATTGGATTTTGTTGAAGCCGAATTGGGCCAAATCATCAGCCAGCAACAAC
TGGCCGAAGCGATTAGTCCACCGCTACAACGCATTCAGGAGCAAGTCAGCCTGGCGCTGACCACCAGCAATGTCAAACCG
GATGTTATTTACCTGACGGGTGGGAGCGCCCGCTCTCCGTTACTGCGTGCCGCGCTACAGCAACAATTGCCGGGGATCCC
GTTGGTGGGGGGGAACGATTTCGGCTCGGTGACCGCCGGACTGGCCCGCTGGGCCCAAACCCTGTACCGATAA

Upstream 100 bases:

>100_bases
TCGGCGGTGGGTCGCGCCCTGATTTGGAGAGTGATCCACTTGCTCCCATGTTCACTCTAGGGTAAAGTCGCCCCCCTTTA
TTTGGCCTGGGGAGCAATTG

Downstream 100 bases:

>100_bases
CCCCTATTATGTTCACCTCTCAGTGAGTTATCTCGCACTGAGAGTTTTTGTTGGCGTATCACTTGCAAGACTGCATGTGC
GGCGCGGCAACGAGAGTGGT

Product: putative chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MFIGFDYGTANCSVAVMRDDAPTLLALENNDVYLPSMLCAPTREAVSECLHRHWQVPTGSDENQQLLRRAIAFNREEDIP
VTADSLLFGLSALAQYIEDPEEVYFVKSPKSFLGANGLKPQQLALFEDLVCAMMFHIKRQAESVLAAEIRQTVIGRPVNF
QGSGGEDANRQAEGILLRAAQRAGFRDIAFQFEPVAAGLDFEATLTEEKTVLVVDIGGGTTDCSVLLMGPKWQGLADRQQ
SLLGHSGCRVGGNDLDIMLAFKQLMPLFGMGGETEKGIAMPSLPYWNAVATNDVPAQSDFYSTVNGRFLRDLIRDAANPQ
HVERLLKVYQQRLSYRLVRAAEESKIALSDQEQVATTLDFVEAELGQIISQQQLAEAISPPLQRIQEQVSLALTTSNVKP
DVIYLTGGSARSPLLRAALQQQLPGIPLVGGNDFGSVTAGLARWAQTLYR

Sequences:

>Translated_450_residues
MFIGFDYGTANCSVAVMRDDAPTLLALENNDVYLPSMLCAPTREAVSECLHRHWQVPTGSDENQQLLRRAIAFNREEDIP
VTADSLLFGLSALAQYIEDPEEVYFVKSPKSFLGANGLKPQQLALFEDLVCAMMFHIKRQAESVLAAEIRQTVIGRPVNF
QGSGGEDANRQAEGILLRAAQRAGFRDIAFQFEPVAAGLDFEATLTEEKTVLVVDIGGGTTDCSVLLMGPKWQGLADRQQ
SLLGHSGCRVGGNDLDIMLAFKQLMPLFGMGGETEKGIAMPSLPYWNAVATNDVPAQSDFYSTVNGRFLRDLIRDAANPQ
HVERLLKVYQQRLSYRLVRAAEESKIALSDQEQVATTLDFVEAELGQIISQQQLAEAISPPLQRIQEQVSLALTTSNVKP
DVIYLTGGSARSPLLRAALQQQLPGIPLVGGNDFGSVTAGLARWAQTLYR
>Mature_450_residues
MFIGFDYGTANCSVAVMRDDAPTLLALENNDVYLPSMLCAPTREAVSECLHRHWQVPTGSDENQQLLRRAIAFNREEDIP
VTADSLLFGLSALAQYIEDPEEVYFVKSPKSFLGANGLKPQQLALFEDLVCAMMFHIKRQAESVLAAEIRQTVIGRPVNF
QGSGGEDANRQAEGILLRAAQRAGFRDIAFQFEPVAAGLDFEATLTEEKTVLVVDIGGGTTDCSVLLMGPKWQGLADRQQ
SLLGHSGCRVGGNDLDIMLAFKQLMPLFGMGGETEKGIAMPSLPYWNAVATNDVPAQSDFYSTVNGRFLRDLIRDAANPQ
HVERLLKVYQQRLSYRLVRAAEESKIALSDQEQVATTLDFVEAELGQIISQQQLAEAISPPLQRIQEQVSLALTTSNVKP
DVIYLTGGSARSPLLRAALQQQLPGIPLVGGNDFGSVTAGLARWAQTLYR

Specific function: Unknown

COG id: COG0443

COG function: function code O; Molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heat shock protein 70 family [H]

Homologues:

Organism=Escherichia coli, GI87082035, Length=450, Percent_Identity=71.7777777777778, Blast_Score=671, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018181
- InterPro:   IPR001023
- InterPro:   IPR013126 [H]

Pfam domain/function: PF00012 HSP70 [H]

EC number: NA

Molecular weight: Translated: 49247; Mature: 49247

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS00329 HSP70_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIGFDYGTANCSVAVMRDDAPTLLALENNDVYLPSMLCAPTREAVSECLHRHWQVPTGS
CEEEEECCCCCEEEEEEECCCCEEEEECCCCEECCHHHHCCCHHHHHHHHHHHCCCCCCC
DENQQLLRRAIAFNREEDIPVTADSLLFGLSALAQYIEDPEEVYFVKSPKSFLGANGLKP
CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCCCCH
QQLALFEDLVCAMMFHIKRQAESVLAAEIRQTVIGRPVNFQGSGGEDANRQAEGILLRAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
QRAGFRDIAFQFEPVAAGLDFEATLTEEKTVLVVDIGGGTTDCSVLLMGPKWQGLADRQQ
HHCCCHHHHEEEEHHCCCCCCEEEECCCCEEEEEECCCCCCCCEEEEECCCCCCHHHHHH
SLLGHSGCRVGGNDLDIMLAFKQLMPLFGMGGETEKGIAMPSLPYWNAVATNDVPAQSDF
HHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHH
YSTVNGRFLRDLIRDAANPQHVERLLKVYQQRLSYRLVRAAEESKIALSDQEQVATTLDF
HHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHH
VEAELGQIISQQQLAEAISPPLQRIQEQVSLALTTSNVKPDVIYLTGGSARSPLLRAALQ
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHEEEEECCCCCCEEEEECCCCCCHHHHHHHH
QQLPGIPLVGGNDFGSVTAGLARWAQTLYR
HHCCCCEEECCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFIGFDYGTANCSVAVMRDDAPTLLALENNDVYLPSMLCAPTREAVSECLHRHWQVPTGS
CEEEEECCCCCEEEEEEECCCCEEEEECCCCEECCHHHHCCCHHHHHHHHHHHCCCCCCC
DENQQLLRRAIAFNREEDIPVTADSLLFGLSALAQYIEDPEEVYFVKSPKSFLGANGLKP
CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCCCCH
QQLALFEDLVCAMMFHIKRQAESVLAAEIRQTVIGRPVNFQGSGGEDANRQAEGILLRAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
QRAGFRDIAFQFEPVAAGLDFEATLTEEKTVLVVDIGGGTTDCSVLLMGPKWQGLADRQQ
HHCCCHHHHEEEEHHCCCCCCEEEECCCCEEEEEECCCCCCCCEEEEECCCCCCHHHHHH
SLLGHSGCRVGGNDLDIMLAFKQLMPLFGMGGETEKGIAMPSLPYWNAVATNDVPAQSDF
HHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHH
YSTVNGRFLRDLIRDAANPQHVERLLKVYQQRLSYRLVRAAEESKIALSDQEQVATTLDF
HHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHH
VEAELGQIISQQQLAEAISPPLQRIQEQVSLALTTSNVKPDVIYLTGGSARSPLLRAALQ
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHEEEEECCCCCCEEEEECCCCCCHHHHHHHH
QQLPGIPLVGGNDFGSVTAGLARWAQTLYR
HHCCCCEEECCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 6094528; 7940673; 7984428 [H]