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The map label for this gene is yfiM [H]

Identifier: 108810987

GI number: 108810987

Start: 958951

End: 959292

Strand: Reverse

Name: yfiM [H]

Synonym: YPN_0822

Alternate gene names: 108810987

Gene position: 959292-958951 (Counterclockwise)

Preceding gene: 108810988

Following gene: 108810983

Centisome position: 21.15

GC content: 47.66

Gene sequence:

>342_bases
ATGCGGCTGCATATCTATCTTCGCCGATTGCTTATCGCCCCATTGCTCTTACTCACTTCTGCCTGTACCCATGTCGCGAA
TGACAGCTGGACTGGAAAAGATAAAGCCCAACATTTTTTTGCTTCTGCTGCTCTGGCCGCTGCAGGTACAGCATACGGAG
AACATCAGAATTGGTCAGATGCTAAAAGTCGCAATTTTGGCTTATTATTTTCTATTGGTATTGGGGCTGGTAAGGAATGG
TACGACAGCCGCCAAGCAGGAACCGGCTGGAGCTGGAAAGATTTTACCTGGGATATCGCTGGCGCTATTACTGGTTATAG
TCTTTATCGGGCAGCGAATTGA

Upstream 100 bases:

>100_bases
AGGATCCGCATTGATCGGTTAATTAGCCGTATTCTATAAGTCTTAAAGATAAAACCCGGTGAATTAGCGGGTTTTCATCT
CCCACTAAAAGAGAAACTCT

Downstream 100 bases:

>100_bases
GCCGTATAGAAATCCCAACAGATTGAATATCAAGAAAATGTCTCACTGCCCCAAACTTAATCCCCAATAATATTCCCCCT
TCAATCAACACCATCACCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MRLHIYLRRLLIAPLLLLTSACTHVANDSWTGKDKAQHFFASAALAAAGTAYGEHQNWSDAKSRNFGLLFSIGIGAGKEW
YDSRQAGTGWSWKDFTWDIAGAITGYSLYRAAN

Sequences:

>Translated_113_residues
MRLHIYLRRLLIAPLLLLTSACTHVANDSWTGKDKAQHFFASAALAAAGTAYGEHQNWSDAKSRNFGLLFSIGIGAGKEW
YDSRQAGTGWSWKDFTWDIAGAITGYSLYRAAN
>Mature_113_residues
MRLHIYLRRLLIAPLLLLTSACTHVANDSWTGKDKAQHFFASAALAAAGTAYGEHQNWSDAKSRNFGLLFSIGIGAGKEW
YDSRQAGTGWSWKDFTWDIAGAITGYSLYRAAN

Specific function: Unknown

COG id: COG5544

COG function: function code R; Predicted periplasmic lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI145693173, Length=102, Percent_Identity=57.843137254902, Blast_Score=128, Evalue=8e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018736
- InterPro:   IPR017028 [H]

Pfam domain/function: PF10043 DUF2279 [H]

EC number: NA

Molecular weight: Translated: 12469; Mature: 12469

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLHIYLRRLLIAPLLLLTSACTHVANDSWTGKDKAQHFFASAALAAAGTAYGEHQNWSD
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
AKSRNFGLLFSIGIGAGKEWYDSRQAGTGWSWKDFTWDIAGAITGYSLYRAAN
CCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRLHIYLRRLLIAPLLLLTSACTHVANDSWTGKDKAQHFFASAALAAAGTAYGEHQNWSD
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
AKSRNFGLLFSIGIGAGKEWYDSRQAGTGWSWKDFTWDIAGAITGYSLYRAAN
CCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 2002065; 2118499; 7567469 [H]