| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is 108810948
Identifier: 108810948
GI number: 108810948
Start: 915584
End: 915835
Strand: Reverse
Name: 108810948
Synonym: YPN_0783
Alternate gene names: NA
Gene position: 915835-915584 (Counterclockwise)
Preceding gene: 108810949
Following gene: 108810939
Centisome position: 20.2
GC content: 53.17
Gene sequence:
>252_bases TTGGTTAACAGCCCCAGCCATGGGGCGGACACTTTACTCTTCTGCTTATCCTCACCGTTCAAGATCGCGTCATTGGGGTT TGTCAGCAGTCTGGCTTTGTATCGTGATCCCGGTGCCATTAGCCTCGTTATTTTAGGGCATAGACAACTGGCGTGTTACG CCGCGGGTTATCTCATTGCCCCATCACCGGCTGCTGGCCTCCGTTTCACGGCTTCCCATGCCAGTAGCAATCAACGCCCA GATATTTACTGA
Upstream 100 bases:
>100_bases AGTGCTGCTATTCGAGGTGCACTGACCGGTAACTACATTGATGTGCTAATTACCGACCGGCTGACAGCAGAAACATTACT CTAGCCACCCTGCCAACATA
Downstream 100 bases:
>100_bases ATGCTTCTTGCAAAACCTGAGCTGTAGCTGAATGGTTCATGGCCACATGGTGTTCAAAACCGTTGTTGCAAATATGCGTG AGCAAACTTTCCAACTGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MVNSPSHGADTLLFCLSSPFKIASLGFVSSLALYRDPGAISLVILGHRQLACYAAGYLIAPSPAAGLRFTASHASSNQRP DIY
Sequences:
>Translated_83_residues MVNSPSHGADTLLFCLSSPFKIASLGFVSSLALYRDPGAISLVILGHRQLACYAAGYLIAPSPAAGLRFTASHASSNQRP DIY >Mature_83_residues MVNSPSHGADTLLFCLSSPFKIASLGFVSSLALYRDPGAISLVILGHRQLACYAAGYLIAPSPAAGLRFTASHASSNQRP DIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8724; Mature: 8724
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNSPSHGADTLLFCLSSPFKIASLGFVSSLALYRDPGAISLVILGHRQLACYAAGYLIA CCCCCCCCCCEEEEECCCCCCEEHHHHHHHHHEECCCCCEEEEEECCCEEEEEECCEEEC PSPAAGLRFTASHASSNQRPDIY CCCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure MVNSPSHGADTLLFCLSSPFKIASLGFVSSLALYRDPGAISLVILGHRQLACYAAGYLIA CCCCCCCCCCEEEEECCCCCCEEHHHHHHHHHEECCCCCEEEEEECCCEEEEEECCEEEC PSPAAGLRFTASHASSNQRPDIY CCCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA