Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108810743

Identifier: 108810743

GI number: 108810743

Start: 689867

End: 690133

Strand: Reverse

Name: 108810743

Synonym: YPN_0578

Alternate gene names: NA

Gene position: 690133-689867 (Counterclockwise)

Preceding gene: 108810744

Following gene: 108810742

Centisome position: 15.22

GC content: 52.06

Gene sequence:

>267_bases
ATGGAAATTAACACGCATCGGCGACGACCGTTTGTCGCCCAACCGGTGAGTACCGATACAGTATCAGCCGTCAAAGCGAT
AGAGCCGATTAAAACCGTCACTAACAACCCCCATTACGCAACCTCTGACCTGCATGCCCAACTGGACGCGATGCCAGAAG
TAGACAGTGAAAAGGTTGATGCCGCCAAAGCTGCAATTCTCGCGGGAAGAATTACTCTCGACAGTGCAGCTGTCGCCAGG
GCTATACTCAACTTCCACGGGAGATAA

Upstream 100 bases:

>100_bases
GAGTGTGGGCGTTATTCGCTACAACTCGAATGACTTAGGGTATACGCATTTAGCGATTTAATAAGTTCACGGTAATTTAA
CTGACAAAAGGTGATTTTAG

Downstream 100 bases:

>100_bases
TCTGTTATGGAGCCGACACAACGTGTTAAACAACTGCTGATAGACATTCAGGAAGATCGTAAACGTTACATCGCGCTGGA
AAAACTGTTAATCAAGCAAC

Product: flagellar regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MEINTHRRRPFVAQPVSTDTVSAVKAIEPIKTVTNNPHYATSDLHAQLDAMPEVDSEKVDAAKAAILAGRITLDSAAVAR
AILNFHGR

Sequences:

>Translated_88_residues
MEINTHRRRPFVAQPVSTDTVSAVKAIEPIKTVTNNPHYATSDLHAQLDAMPEVDSEKVDAAKAAILAGRITLDSAAVAR
AILNFHGR
>Mature_88_residues
MEINTHRRRPFVAQPVSTDTVSAVKAIEPIKTVTNNPHYATSDLHAQLDAMPEVDSEKVDAAKAAILAGRITLDSAAVAR
AILNFHGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9503; Mature: 9503

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEINTHRRRPFVAQPVSTDTVSAVKAIEPIKTVTNNPHYATSDLHAQLDAMPEVDSEKVD
CCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCHHH
AAKAAILAGRITLDSAAVARAILNFHGR
HHHHHHHHCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MEINTHRRRPFVAQPVSTDTVSAVKAIEPIKTVTNNPHYATSDLHAQLDAMPEVDSEKVD
CCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCHHH
AAKAAILAGRITLDSAAVARAILNFHGR
HHHHHHHHCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA