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The map label for this gene is fhiA [H]

Identifier: 108810728

GI number: 108810728

Start: 676452

End: 677753

Strand: Reverse

Name: fhiA [H]

Synonym: YPN_0563

Alternate gene names: 108810728

Gene position: 677753-676452 (Counterclockwise)

Preceding gene: 108810729

Following gene: 108810727

Centisome position: 14.95

GC content: 45.78

Gene sequence:

>1302_bases
ATGATGAAACATAAATTATATGATATTTCTCGTCTGTTAAAAGAGACGCATATTGCAGTCCCCGTATTATTACTGTGCGT
CTTGGCAATGGTAATATTGCCATTATCACCTCTGGTTCTGGATATTTTATTCACCTTTAATATTGTGATGGCTGTATTGG
TGTTATTGGTCAGTGTGAACAGTAAACGGCCACTGGATTTTTCAATTTTACCGCCGATATTACTGATCGCTACGCTGATG
CGTTTAACCTTAAACGTCGCCTCCACACGCGTGGTATTACTCAATGGTCATGAAGGGGCTGATGCGGCAGGTAAAGTGAT
CGAAGCCTTTGGCCAGGTGGTCATTGGCGGTAATTTTGTTGTTGGCTTTGTTGTCTTTATCATCTTGATGATCATCAATT
TCGTGGTAGTGACCAAAGGGGCTGAACGTGTTTCTGAAGTCTCTGCTCGCTTTACCTTGGATGCGCTCCCGGGCAAACAG
ATGGCTATTGATGCGGATCTTAACGCCGGATTAATTAATCAGGAACAAGCCAGTATTCGCCGTAAAGAAGTGGCCAGTGA
GGCCGATTTCTACGGCGCAATGGATGGCGCATCAAAGTTTGTACGCGGGGATGCGGTCGCCGGGATGATGATCCTGGTGA
TTAACGTGATTGACGGTATTTGTATTGGTATTTTTAAATACGATTTGAGCGCCAGCCAGTCATTCCAGCAATATGTTCTA
CTGACCATTGGTGATGGTTTGGTGGCACAAATTCCGTCACTGTTATTGGCAACTGCGGCGGCAATTATTGTCACTCGAGT
GAGTGATGGCGGCGATATGACTGATGAAGTTAAAGATCAGTTATTGGCTAAACCCACGATCTTGTATGCTGCGGCTTTTG
TGATGTTTATTCTCGCTATCGTGCCGGGGATGCCCCATCTCGCCTTTCTCAGTTTTACCGGATTACTGCTGTTCGCCGCT
AGGCAGCAAAGTAAAAAAATTCAGCAAGCAGATCTTAACCCCGATTTTACGGCCTTAAACCCGGTTATTTCTGACGAAAA
TGCCCTAAGTATCAGTTGGGACAGTATTCCTGCGGTCGAACCCATTGGTTTAAATTTGGGTTATAAACTGGTCACGTTGG
TGGATGAATCAAAGGGTAAACCGTTGAACCAACGGCTACGCGGCGTGCGACAAATCATCTCCGAAAGCAGCGGCGTTTTA
TTGCCAGAAGTCCGGGTGCGGGAAAATTTCCGTTTAAAACCGTCCCAATACACCATCAATATTAATGGTGTCAGGATCGC
GGGGGGGGGAAGTCCATGTTGA

Upstream 100 bases:

>100_bases
CTGACCTATGTCATGCAGATCAAGTCATGGCGTTCCGGGCAGGCAAGCAAGCCGGTATTAAACACTCACCTTGGGCTTCC
CAAAGAGATGCAACGATTCC

Downstream 100 bases:

>100_bases
TAAGCTCATGGCTATTCCAACGACACAGCAATACGGTGAGGTTGATGGGATTTTAGCCACTGACCCGACTTATGGTTTGG
CCATCGTGTGGATAGACCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MMKHKLYDISRLLKETHIAVPVLLLCVLAMVILPLSPLVLDILFTFNIVMAVLVLLVSVNSKRPLDFSILPPILLIATLM
RLTLNVASTRVVLLNGHEGADAAGKVIEAFGQVVIGGNFVVGFVVFIILMIINFVVVTKGAERVSEVSARFTLDALPGKQ
MAIDADLNAGLINQEQASIRRKEVASEADFYGAMDGASKFVRGDAVAGMMILVINVIDGICIGIFKYDLSASQSFQQYVL
LTIGDGLVAQIPSLLLATAAAIIVTRVSDGGDMTDEVKDQLLAKPTILYAAAFVMFILAIVPGMPHLAFLSFTGLLLFAA
RQQSKKIQQADLNPDFTALNPVISDENALSISWDSIPAVEPIGLNLGYKLVTLVDESKGKPLNQRLRGVRQIISESSGVL
LPEVRVRENFRLKPSQYTININGVRIAGGGSPC

Sequences:

>Translated_433_residues
MMKHKLYDISRLLKETHIAVPVLLLCVLAMVILPLSPLVLDILFTFNIVMAVLVLLVSVNSKRPLDFSILPPILLIATLM
RLTLNVASTRVVLLNGHEGADAAGKVIEAFGQVVIGGNFVVGFVVFIILMIINFVVVTKGAERVSEVSARFTLDALPGKQ
MAIDADLNAGLINQEQASIRRKEVASEADFYGAMDGASKFVRGDAVAGMMILVINVIDGICIGIFKYDLSASQSFQQYVL
LTIGDGLVAQIPSLLLATAAAIIVTRVSDGGDMTDEVKDQLLAKPTILYAAAFVMFILAIVPGMPHLAFLSFTGLLLFAA
RQQSKKIQQADLNPDFTALNPVISDENALSISWDSIPAVEPIGLNLGYKLVTLVDESKGKPLNQRLRGVRQIISESSGVL
LPEVRVRENFRLKPSQYTININGVRIAGGGSPC
>Mature_433_residues
MMKHKLYDISRLLKETHIAVPVLLLCVLAMVILPLSPLVLDILFTFNIVMAVLVLLVSVNSKRPLDFSILPPILLIATLM
RLTLNVASTRVVLLNGHEGADAAGKVIEAFGQVVIGGNFVVGFVVFIILMIINFVVVTKGAERVSEVSARFTLDALPGKQ
MAIDADLNAGLINQEQASIRRKEVASEADFYGAMDGASKFVRGDAVAGMMILVINVIDGICIGIFKYDLSASQSFQQYVL
LTIGDGLVAQIPSLLLATAAAIIVTRVSDGGDMTDEVKDQLLAKPTILYAAAFVMFILAIVPGMPHLAFLSFTGLLLFAA
RQQSKKIQQADLNPDFTALNPVISDENALSISWDSIPAVEPIGLNLGYKLVTLVDESKGKPLNQRLRGVRQIISESSGVL
LPEVRVRENFRLKPSQYTININGVRIAGGGSPC

Specific function: Not Known. [C]

COG id: COG1298

COG function: function code NU; Flagellar biosynthesis pathway, component FlhA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family [H]

Homologues:

Organism=Escherichia coli, GI1788187, Length=422, Percent_Identity=49.0521327014218, Blast_Score=398, Evalue=1e-112,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001712 [H]

Pfam domain/function: PF00771 FHIPEP [H]

EC number: NA

Molecular weight: Translated: 46665; Mature: 46665

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS00994 FHIPEP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKHKLYDISRLLKETHIAVPVLLLCVLAMVILPLSPLVLDILFTFNIVMAVLVLLVSVN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
SKRPLDFSILPPILLIATLMRLTLNVASTRVVLLNGHEGADAAGKVIEAFGQVVIGGNFV
CCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHCCEEECCCHH
VGFVVFIILMIINFVVVTKGAERVSEVSARFTLDALPGKQMAIDADLNAGLINQEQASIR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEECCCCCCEEEECCCCCCCCCHHHHHHH
RKEVASEADFYGAMDGASKFVRGDAVAGMMILVINVIDGICIGIFKYDLSASQSFQQYVL
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEE
LTIGDGLVAQIPSLLLATAAAIIVTRVSDGGDMTDEVKDQLLAKPTILYAAAFVMFILAI
EEECCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH
VPGMPHLAFLSFTGLLLFAARQQSKKIQQADLNPDFTALNPVISDENALSISWDSIPAVE
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCEEEEECCCCCCCC
PIGLNLGYKLVTLVDESKGKPLNQRLRGVRQIISESSGVLLPEVRVRENFRLKPSQYTIN
CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEECCCHHHCCCCEECCCEEEEE
INGVRIAGGGSPC
ECEEEEECCCCCC
>Mature Secondary Structure
MMKHKLYDISRLLKETHIAVPVLLLCVLAMVILPLSPLVLDILFTFNIVMAVLVLLVSVN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
SKRPLDFSILPPILLIATLMRLTLNVASTRVVLLNGHEGADAAGKVIEAFGQVVIGGNFV
CCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHCCEEECCCHH
VGFVVFIILMIINFVVVTKGAERVSEVSARFTLDALPGKQMAIDADLNAGLINQEQASIR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEECCCCCCEEEECCCCCCCCCHHHHHHH
RKEVASEADFYGAMDGASKFVRGDAVAGMMILVINVIDGICIGIFKYDLSASQSFQQYVL
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEE
LTIGDGLVAQIPSLLLATAAAIIVTRVSDGGDMTDEVKDQLLAKPTILYAAAFVMFILAI
EEECCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH
VPGMPHLAFLSFTGLLLFAARQQSKKIQQADLNPDFTALNPVISDENALSISWDSIPAVE
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCEEEEECCCCCCCC
PIGLNLGYKLVTLVDESKGKPLNQRLRGVRQIISESSGVLLPEVRVRENFRLKPSQYTIN
CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEECCCHHHCCCCEECCCEEEEE
INGVRIAGGGSPC
ECEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7596361; 9278503 [H]