| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is 108810707
Identifier: 108810707
GI number: 108810707
Start: 657447
End: 657959
Strand: Reverse
Name: 108810707
Synonym: YPN_0542
Alternate gene names: NA
Gene position: 657959-657447 (Counterclockwise)
Preceding gene: 108810708
Following gene: 108810706
Centisome position: 14.51
GC content: 45.61
Gene sequence:
>513_bases TTGTTCAGGAAAAATAATACGTTAATCAATAATCAAGGTGGTGCAATTATTGTTGAATTTGCATTTGTGACTTTTATTAT TGTTCTATTTATAAAACTGCTGATTGCCATCGCTGAATATCAGTCGATTTCCGGTAAGTTAGATCGTCTTTCATATTCAG CCGCGGGTATCATTCGTGAAAGGGGGCGGTTATATCCGCATGATCCTGAATTGAATCAACAGCAAGTTGATCAACTCAGA GATCTTGTTCAGCGTGCGTTACTGAACTCGGGTGTACCTGCTGATAACCTCAGGATGCGGGTAGAGACATTACATTTTAA CCCCATCGAGCCACCAGGTTCTCGTCAGCAACAGATTGATGAGCATAAGAGCCTGTCATTCAGTACTGGCGATTGCTCCC CGGTTCAGCCACTCCGTGGGTTAGTTGCGCTGTCACCATTAAGCCAAAGTGAACGCTGGGTGCCGCTCTACCAGGTCACA ATATGCCTGCCCCCCCCCTCAGAGATACCGTGA
Upstream 100 bases:
>100_bases CTACCACTCGCCCACTATCAGGTTAGATTACATTACCAACCGATATTTTTACCTTTCCCTCAAGCATGGGTAAATACGTT ATTGTCCAGGGAGGTGATTT
Downstream 100 bases:
>100_bases CCTGATTAGTGTCAGCCCCTTGCCAACATTGAAATCATCGGCCATCACAATCGGGCGCTAAACAGCCTACGAATAAAGGT TATATATGCAGAAAAAAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MFRKNNTLINNQGGAIIVEFAFVTFIIVLFIKLLIAIAEYQSISGKLDRLSYSAAGIIRERGRLYPHDPELNQQQVDQLR DLVQRALLNSGVPADNLRMRVETLHFNPIEPPGSRQQQIDEHKSLSFSTGDCSPVQPLRGLVALSPLSQSERWVPLYQVT ICLPPPSEIP
Sequences:
>Translated_170_residues MFRKNNTLINNQGGAIIVEFAFVTFIIVLFIKLLIAIAEYQSISGKLDRLSYSAAGIIRERGRLYPHDPELNQQQVDQLR DLVQRALLNSGVPADNLRMRVETLHFNPIEPPGSRQQQIDEHKSLSFSTGDCSPVQPLRGLVALSPLSQSERWVPLYQVT ICLPPPSEIP >Mature_170_residues MFRKNNTLINNQGGAIIVEFAFVTFIIVLFIKLLIAIAEYQSISGKLDRLSYSAAGIIRERGRLYPHDPELNQQQVDQLR DLVQRALLNSGVPADNLRMRVETLHFNPIEPPGSRQQQIDEHKSLSFSTGDCSPVQPLRGLVALSPLSQSERWVPLYQVT ICLPPPSEIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19102; Mature: 19102
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRKNNTLINNQGGAIIVEFAFVTFIIVLFIKLLIAIAEYQSISGKLDRLSYSAAGIIRE CCCCCCCEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH RGRLYPHDPELNQQQVDQLRDLVQRALLNSGVPADNLRMRVETLHFNPIEPPGSRQQQID CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEEEECCCCCCCCCHHHHHH EHKSLSFSTGDCSPVQPLRGLVALSPLSQSERWVPLYQVTICLPPPSEIP HHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCC >Mature Secondary Structure MFRKNNTLINNQGGAIIVEFAFVTFIIVLFIKLLIAIAEYQSISGKLDRLSYSAAGIIRE CCCCCCCEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH RGRLYPHDPELNQQQVDQLRDLVQRALLNSGVPADNLRMRVETLHFNPIEPPGSRQQQID CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEEEECCCCCCCCCHHHHHH EHKSLSFSTGDCSPVQPLRGLVALSPLSQSERWVPLYQVTICLPPPSEIP HHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA