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The map label for this gene is yqjE [H]

Identifier: 108810603

GI number: 108810603

Start: 533377

End: 533841

Strand: Reverse

Name: yqjE [H]

Synonym: YPN_0438

Alternate gene names: 108810603

Gene position: 533841-533377 (Counterclockwise)

Preceding gene: 108810604

Following gene: 108810602

Centisome position: 11.77

GC content: 50.97

Gene sequence:

>465_bases
ATGGACTGGCGTAGGTATCGGTGCTGCTGTTGGCGTGGTGTTAGGCGTTCTGTTGTCTCGCCGTTAATTATGGCAGAGCA
ACCTCGCACTCAGGGCCCCGCTAAAGGGGTCCTTGATACTGTCCATCGCATCGCCACTATCGTGGTTGGCATAGTCGAAA
CCCGTGTCCGGCTGGCAGTGATTGAATTGGAAGAGGAAAAGGCAACGTTGGTCCAGTTGCTGATGATGGCGGGTATTACT
CTGCTATTAACCGCTTTCGGTTTAATGAGTTTGTTGGTTTTGGTCATTTGGGCGATTGATCCAGCCTACCGTTTAGTGGC
GTTGGGTACCACGACTGCTGTGTTACTGATACTGGCACTGATCGGTGTTATCTGGACACTCACTAAAGTGCGTCATTCTA
CGTTGCTGGGTTCAACCCGTAAGCAGTTGGAAACTGACCGCGAGTTACTGGAGAAAGACCATTGA

Upstream 100 bases:

>100_bases
TGAAAGATACCCGAGTTCGTCTGAGCGAAACGAGTGATAAAATTGCAGCCCAAACCAAAGAGATCGCAGATAAAGCGGAT
AACTACGTACATGACAATCC

Downstream 100 bases:

>100_bases
GCCGCCACCAGCTAGCATTGGAAAAAGAAGCATTACTGCGTGAGATCCAGCAACAACGTCTGGATCTCGCGGACAGTGCT
GCTCGTTGGGTTGAAGTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MDWRRYRCCCWRGVRRSVVSPLIMAEQPRTQGPAKGVLDTVHRIATIVVGIVETRVRLAVIELEEEKATLVQLLMMAGIT
LLLTAFGLMSLLVLVIWAIDPAYRLVALGTTTAVLLILALIGVIWTLTKVRHSTLLGSTRKQLETDRELLEKDH

Sequences:

>Translated_154_residues
MDWRRYRCCCWRGVRRSVVSPLIMAEQPRTQGPAKGVLDTVHRIATIVVGIVETRVRLAVIELEEEKATLVQLLMMAGIT
LLLTAFGLMSLLVLVIWAIDPAYRLVALGTTTAVLLILALIGVIWTLTKVRHSTLLGSTRKQLETDRELLEKDH
>Mature_154_residues
MDWRRYRCCCWRGVRRSVVSPLIMAEQPRTQGPAKGVLDTVHRIATIVVGIVETRVRLAVIELEEEKATLVQLLMMAGIT
LLLTAFGLMSLLVLVIWAIDPAYRLVALGTTTAVLLILALIGVIWTLTKVRHSTLLGSTRKQLETDRELLEKDH

Specific function: Unknown

COG id: COG5393

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789486, Length=130, Percent_Identity=62.3076923076923, Blast_Score=115, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009937 [H]

Pfam domain/function: PF07332 DUF1469 [H]

EC number: NA

Molecular weight: Translated: 17270; Mature: 17270

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWRRYRCCCWRGVRRSVVSPLIMAEQPRTQGPAKGVLDTVHRIATIVVGIVETRVRLAV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IELEEEKATLVQLLMMAGITLLLTAFGLMSLLVLVIWAIDPAYRLVALGTTTAVLLILAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
IGVIWTLTKVRHSTLLGSTRKQLETDRELLEKDH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDWRRYRCCCWRGVRRSVVSPLIMAEQPRTQGPAKGVLDTVHRIATIVVGIVETRVRLAV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IELEEEKATLVQLLMMAGITLLLTAFGLMSLLVLVIWAIDPAYRLVALGTTTAVLLILAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
IGVIWTLTKVRHSTLLGSTRKQLETDRELLEKDH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]